Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 2.1e-169 599.0 304 100.0
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 4.5e-124 448.4 290 79.3
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.4e-120 436.8 303 74.6
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.4e-120 436.8 303 74.6
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 4.8e-110 401.7 291 72.9
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 1.7e-107 393.3 313 66.8
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 3.6e-105 385.6 305 67.9
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 3.0e-104 382.5 300 66.7
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 4.4e-103 378.6 300 66.0
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 9.8e-103 377.5 300 66.0
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 1.7e-102 376.7 241 75.5
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 6.3e-102 374.8 249 74.7
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 8.3e-102 374.4 275 69.5
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 8.3e-102 374.4 266 71.1
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 2.4e-101 372.9 275 69.5
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 2.4e-101 372.9 303 65.7
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 1.6e-100 370.2 309 63.1
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 2.0e-100 369.8 304 63.8
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 4.5e-100 368.6 314 62.7
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 1.0e-99 367.5 238 74.4
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 1.0e-99 367.5 295 65.8
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 2.9e-99 365.9 297 67.0
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 2.9e-99 365.9 232 75.0
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 6.6e-99 364.8 242 74.8
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 6.6e-99 364.8 289 66.4
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 6.6e-99 364.8 232 74.6
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 1.1e-98 364.0 278 66.2
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 1.1e-98 364.0 268 68.7
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 4.3e-98 362.1 291 66.0
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 5.6e-98 361.7 295 64.7
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 9.5e-98 360.9 297 65.7
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.2e-97 360.5 291 65.6
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 2.1e-97 359.8 299 62.5
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 6.1e-97 358.2 291 65.3
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 6.1e-97 358.2 291 65.3
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 1.0e-96 357.5 291 64.3
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 1.0e-96 357.5 226 76.1
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 2.3e-96 356.3 312 60.6
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 4.0e-96 355.5 291 65.3
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 1.2e-95 354.0 215 77.7
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 2.6e-95 352.8 292 65.1
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 4.4e-95 352.1 329 58.7
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 5.8e-95 351.7 300 61.7
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.3e-94 350.5 312 60.3
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 1.3e-94 350.5 276 64.5
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 2.2e-94 349.7 240 72.1
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 2.9e-94 349.4 289 63.0
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 8.3e-94 347.8 290 64.1
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 8.3e-94 347.8 225 73.8
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 1.4e-93 347.1 303 61.1
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 1.4e-93 347.1 298 63.8
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 3.2e-93 345.9 264 67.0
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 4.1e-93 345.5 300 63.0
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 5.4e-93 345.1 296 63.2
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 5.4e-93 345.1 279 64.9
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 7.0e-93 344.7 221 74.2
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 7.0e-93 344.7 268 65.3
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 9.2e-93 344.4 294 61.9
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 9.2e-93 344.4 233 73.0
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 1.2e-92 344.0 229 72.1
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.6e-92 343.6 223 73.5
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 2.0e-92 343.2 294 61.6
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 2.0e-92 343.2 294 61.6
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 3.5e-92 342.4 298 61.7
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 4.6e-92 342.0 252 68.7
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 6.0e-92 341.7 283 61.5
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 6.0e-92 341.7 241 71.0
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 7.8e-92 341.3 242 68.6
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 7.8e-92 341.3 267 64.4
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 1.3e-91 340.5 309 60.8
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 1.3e-91 340.5 241 69.3
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 2.3e-91 339.7 225 72.4
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 3.9e-91 339.0 291 61.9
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 6.6e-91 338.2 259 67.2
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 4.3e-90 335.5 303 60.4
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 4.3e-90 335.5 303 59.4
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 9.5e-90 334.3 300 61.7
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 1.2e-89 334.0 231 71.0
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 4.7e-89 332.0 232 69.8
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 6.2e-89 331.6 196 81.6
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 1.4e-88 330.5 262 64.5
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 4.0e-88 328.9 261 64.8
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 5.2e-88 328.6 291 62.9
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 2.0e-87 326.6 306 58.8
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 4.4e-87 325.5 296 59.8
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 1.4e-85 320.5 211 72.0
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 2.7e-84 316.2 234 70.9
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 6.0e-84 315.1 277 61.0
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 2.3e-83 313.2 281 61.2
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 3.9e-83 312.4 242 64.0
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 3.6e-73 279.3 211 62.1
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 1.2e-71 274.2 213 68.5
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 9.9e-71 271.2 242 60.7
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 1.3e-70 270.8 213 61.5
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.5e-66 257.3 217 59.0
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 5.3e-64 248.8 213 55.4
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 1.3e-57 227.6 165 67.3
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 1.2e-55 221.1 249 46.6
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 5.8e-55 218.8 204 57.4
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 4.9e-54 215.7 211 48.8
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 1.9e-53 213.8 191 53.4
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 2.1e-52 210.3 211 56.9
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 2.3e-51 206.8 211 55.9
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.1e-50 204.5 145 70.3
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 1.1e-50 204.5 161 65.2
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.9e-42 177.2 158 60.8
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 1.9e-42 177.2 135 65.9
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 1.1e-40 171.4 126 65.9
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 1.1e-40 171.4 112 73.2
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 7.4e-34 148.7 77 90.9
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 7.4e-34 148.7 77 90.9
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 2.8e-33 146.7 89 76.4
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 1.4e-19 101.3 154 44.2
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 4.4e-18 96.3 99 47.5
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 2.8e-17 93.6 235 28.9
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 1.6e-12 77.8 62 67.7
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 3.1e-08 63.5 66 53.0
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 5.3e-08 62.8 39 71.8
PRCOL_00004570 Prasinoderma coloniale HOM05D006384 ORTHO05D007917 5.3e-08 62.8 139 27.3
RcHm_v2.0_Chr4g0411411 Rosa chinensis HOM05D006384 ORTHO05D007917 5.3e-08 62.8 49 63.3
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 1.2e-07 61.6 49 53.1
DCAR_032298 Daucus carota HOM05D006384 ORTHO05D007917 3.8e-06 56.6 33 81.8


User provided reference genes

Program Settings