Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 3.0e-229 798.5 512 100.0
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 6.9e-125 451.8 511 59.9
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 1.1e-122 444.5 511 61.6
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 3.5e-121 439.5 514 58.8
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 6.7e-104 382.1 573 53.6
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 1.5e-100 370.9 523 54.3
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 7.7e-100 368.6 528 50.8
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 1.6e-97 360.9 560 47.0
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 4.6e-97 359.4 560 47.0
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 1.8e-96 357.5 487 56.5
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.8e-96 355.1 502 53.0
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 2.0e-95 354.0 544 52.4
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 1.7e-94 350.9 499 50.5
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 2.2e-94 350.5 529 50.5
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 4.1e-93 346.3 486 56.0
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 7.7e-92 342.0 500 50.0
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.3e-91 341.3 478 56.7
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 1.7e-91 340.9 459 54.7
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 4.7e-89 332.8 532 53.0
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 7.9e-89 332.0 534 48.5
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 2.0e-87 327.4 396 55.8
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 1.3e-86 324.7 491 52.7
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 2.2e-86 323.9 487 56.7
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 2.8e-86 323.6 488 56.4
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 3.7e-86 323.2 541 50.1
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 4.8e-86 322.8 551 50.3
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 1.1e-85 321.6 536 45.7
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 7.0e-85 318.9 495 49.5
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 7.0e-85 318.9 492 53.5
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 1.0e-83 315.1 523 46.5
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 1.3e-83 314.7 543 45.3
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 1.3e-83 314.7 534 45.7
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.3e-83 314.7 535 49.3
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 2.2e-83 313.9 531 50.7
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 2.9e-83 313.5 487 55.6
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 3.8e-83 313.2 460 49.3
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 5.0e-83 312.8 471 54.4
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 8.5e-83 312.0 537 49.0
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 3.2e-82 310.1 576 44.6
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.2e-81 308.1 482 48.1
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 1.6e-81 307.8 480 49.2
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 2.1e-81 307.4 470 48.9
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 2.7e-81 307.0 489 50.7
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 4.7e-81 306.2 483 46.6
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 6.1e-81 305.8 491 46.8
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 1.4e-80 304.7 480 47.7
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.4e-80 304.7 480 47.7
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 1.4e-80 304.7 541 45.8
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 2.0e-79 300.8 485 46.0
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 3.3e-79 300.1 495 53.5
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 7.5e-79 298.9 514 44.9
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 7.5e-79 298.9 484 52.1
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 4.8e-78 296.2 576 44.1
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 6.3e-78 295.8 497 46.5
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 8.2e-78 295.4 546 44.3
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 4.1e-77 293.1 528 48.5
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 5.3e-77 292.7 482 53.5
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 5.3e-77 292.7 495 50.5
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 7.0e-77 292.4 474 46.8
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 7.0e-77 292.4 546 47.6
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 9.1e-77 292.0 497 49.9
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 9.1e-77 292.0 551 46.6
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 1.2e-76 291.6 489 48.1
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.6e-76 291.2 482 46.5
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 4.5e-76 289.7 529 43.1
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 1.0e-75 288.5 493 46.2
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 6.5e-75 285.8 551 42.5
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 1.9e-74 284.3 474 45.8
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 2.5e-74 283.9 466 45.3
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 3.2e-74 283.5 522 42.0
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 5.5e-74 282.7 494 43.9
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 5.5e-74 282.7 476 49.8
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 6.1e-73 279.3 484 48.3
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 1.4e-72 278.1 469 47.1
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 4.0e-72 276.6 480 44.4
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 8.8e-72 275.4 540 41.1
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 2.0e-71 274.2 483 48.0
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 7.5e-71 272.3 474 50.0
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 4.8e-70 269.6 531 44.8
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 2.4e-69 267.3 527 45.4
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 5.4e-69 266.2 440 47.0
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 7.0e-69 265.8 485 50.5
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 9.1e-69 265.4 482 49.2
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 2.7e-68 263.8 537 41.2
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 5.9e-68 262.7 529 42.7
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 5.9e-68 262.7 466 47.4
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 1.5e-66 258.1 478 43.5
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 1.9e-66 257.7 538 40.9
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 4.7e-65 253.1 285 63.9
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 2.3e-64 250.8 462 48.9
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 5.2e-64 249.6 530 43.2
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 5.2e-64 249.6 531 43.1
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 2.6e-63 247.3 423 45.9
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 5.7e-63 246.1 537 39.5
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 3.7e-62 243.4 462 48.3
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.8e-61 241.1 315 57.8
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 5.0e-59 233.0 524 43.1
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 8.6e-59 232.3 296 50.0
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 8.6e-59 232.3 415 44.1
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 4.7e-57 226.5 519 41.6
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 6.1e-57 226.1 292 50.7
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 1.2e-55 221.9 475 40.8
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 9.8e-55 218.8 290 50.3
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 9.2e-53 212.2 516 43.8
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 7.8e-52 209.1 490 38.8
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 1.5e-47 194.9 487 41.9
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 4.4e-47 193.4 544 35.1
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 2.2e-46 191.0 294 46.9
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 1.1e-42 178.7 235 58.3
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 1.9e-42 177.9 295 42.4
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 9.5e-42 175.6 476 38.4
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 6.4e-38 162.9 154 57.8
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 1.7e-27 128.3 315 38.7
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 2.1e-25 121.3 72 80.6
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 4.7e-25 120.2 144 61.1
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 7.6e-23 112.8 72 76.4
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 4.9e-22 110.2 138 55.8
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 1.9e-21 108.2 456 28.3
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 1.3e-19 102.1 141 54.6
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 3.3e-18 97.4 136 41.2
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 6.2e-17 93.2 129 54.3
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 6.2e-17 93.2 447 36.2
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 2.4e-16 91.3 187 41.7
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 4.0e-16 90.5 96 51.0
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 2.6e-15 87.8 425 28.5
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 7.6e-15 86.3 91 41.8
CBR_g39021 Chara braunii HOM05D000003 ORTHO05D000004 7.1e-13 79.7 99 35.4
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 4.6e-12 77.0 159 42.8
FvH4_5g32480 Fragaria vesca HOM05D005806 ORTHO05D007119 1.0e-11 75.9 95 57.9
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 7.4e-10 69.7 418 27.0
Nn2g15616 Nelumbo nucifera HOM05D005806 ORTHO05D007119 3.4e-07 60.8 45 62.2


User provided reference genes

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