Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 2.6e-67 258.8 157 100.0
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 4.2e-49 198.4 157 77.1
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.7e-48 195.7 157 77.1
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 1.1e-44 183.7 161 71.4
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.4e-43 178.7 120 75.8
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.9e-41 172.9 155 74.8
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 5.5e-41 171.4 162 71.0
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 2.7e-40 169.1 157 66.2
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 2.7e-40 169.1 157 66.2
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 3.0e-39 165.6 157 65.6
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 2.0e-38 162.9 120 66.7
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 1.3e-37 160.2 158 62.0
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 1.7e-37 159.8 120 66.7
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 6.3e-37 157.9 103 74.8
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 8.2e-37 157.5 158 63.9
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.4e-36 156.8 160 66.2
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.1e-36 155.2 160 65.0
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 9.1e-36 154.1 108 72.2
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 2.0e-35 152.9 157 60.5
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 2.6e-35 152.5 105 72.4
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 5.9e-35 151.4 117 64.1
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 5.9e-35 151.4 160 63.8
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 5.9e-35 151.4 159 63.5
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 2.2e-34 149.4 155 65.2
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 2.2e-34 149.4 105 68.6
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 2.9e-34 149.1 162 54.3
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 3.8e-34 148.7 158 66.5
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 3.8e-34 148.7 118 66.9
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 5.0e-34 148.3 158 65.2
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 5.0e-34 148.3 120 63.3
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 6.5e-34 147.9 118 64.4
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 8.5e-34 147.5 124 64.5
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 8.5e-34 147.5 124 61.3
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 1.1e-33 147.1 111 67.6
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 1.5e-33 146.7 161 64.6
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 1.5e-33 146.7 160 64.4
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 1.9e-33 146.4 115 66.1
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 1.9e-33 146.4 115 66.1
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 3.2e-33 145.6 118 63.6
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 3.2e-33 145.6 104 71.2
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 3.2e-33 145.6 121 59.5
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 5.5e-33 144.8 120 61.7
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 7.2e-33 144.4 106 71.7
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 7.2e-33 144.4 160 62.5
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 9.4e-33 144.1 109 65.1
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 9.4e-33 144.1 158 62.7
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 1.6e-32 143.3 110 65.5
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 1.6e-32 143.3 110 65.5
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 2.7e-32 142.5 159 64.2
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 2.7e-32 142.5 106 70.8
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 2.7e-32 142.5 109 64.2
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 8.0e-32 141.0 105 66.7
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 8.0e-32 141.0 121 63.6
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.0e-31 140.6 157 61.8
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 1.0e-31 140.6 157 61.1
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.8e-31 139.8 120 60.0
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.8e-31 139.8 112 67.0
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 1.8e-31 139.8 118 62.7
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 3.0e-31 139.0 121 60.3
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 4.0e-31 138.7 120 58.3
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 5.2e-31 138.3 110 68.2
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 6.7e-31 137.9 158 61.4
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 1.2e-30 137.1 158 59.5
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.2e-30 137.1 121 62.0
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.5e-30 136.7 117 60.7
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 1.5e-30 136.7 105 67.6
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 2.0e-30 136.3 121 60.3
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 2.0e-30 136.3 118 62.7
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.0e-30 136.3 118 62.7
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.0e-30 136.3 121 62.0
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 2.0e-30 136.3 157 60.5
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 4.4e-30 135.2 121 61.2
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 4.4e-30 135.2 100 66.0
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 4.4e-30 135.2 104 66.3
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 1.3e-29 133.7 121 59.5
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.7e-29 133.3 104 64.4
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.7e-29 133.3 117 58.1
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.2e-29 132.9 102 69.6
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 3.7e-29 132.1 104 63.5
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 6.3e-29 131.3 101 65.3
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 8.2e-29 131.0 123 57.7
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 8.2e-29 131.0 105 63.8
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 1.1e-28 130.6 122 57.4
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 1.8e-28 129.8 154 58.4
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.4e-28 129.4 158 59.5
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 3.1e-28 129.0 159 56.6
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 7.0e-28 127.9 124 55.6
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 1.6e-27 126.7 81 77.8
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.3e-26 123.6 87 71.3
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.3e-26 123.6 82 73.2
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 2.9e-26 122.5 165 58.2
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.9e-26 122.5 107 58.9
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.9e-26 122.5 107 58.9
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 6.5e-26 121.3 169 58.0
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 8.5e-26 120.9 99 63.6
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 8.5e-26 120.9 83 68.7
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 3.2e-25 119.0 141 53.9
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 4.7e-24 115.2 136 50.7
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 1.4e-23 113.6 101 57.4
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 1.8e-23 113.2 167 56.3
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 4.0e-23 112.1 123 50.4
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.2e-22 110.5 172 54.1
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 1.2e-22 110.5 85 67.1
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 3.4e-22 109.0 117 53.8
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 3.1e-20 102.4 115 47.8
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 1.7e-18 96.7 98 55.1
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 5.0e-18 95.1 81 63.0
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 1.5e-17 93.6 115 49.6
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 1.0e-15 87.4 157 47.8
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.0e-15 85.5 104 47.1
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.5e-14 83.6 104 49.0
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 4.4e-14 82.0 64 64.1
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 4.4e-14 82.0 76 60.5
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 7.5e-14 81.3 53 71.7
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 7.0e-12 74.7 92 45.7
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 3.8e-10 68.9 157 44.6
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 1.5e-09 67.0 53 54.7
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 1.9e-09 66.6 42 69.0


User provided reference genes

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