Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.4e-63 246.1 124 100.0
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 7.2e-28 127.5 81 74.1
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.2e-27 126.7 80 73.8
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 4.7e-27 124.8 77 77.9
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 4.7e-27 124.8 81 71.6
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 8.0e-27 124.0 81 75.3
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.4e-26 123.2 81 71.6
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.4e-26 123.2 81 71.6
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 4.0e-26 121.7 81 69.1
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 4.0e-26 121.7 81 69.1
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 5.2e-26 121.3 82 72.0
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 8.8e-26 120.6 81 67.9
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.5e-25 119.8 81 67.9
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 2.6e-25 119.0 83 68.7
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.6e-25 119.0 80 68.8
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 3.3e-25 118.6 81 67.9
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 3.3e-25 118.6 81 67.9
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 3.3e-25 118.6 78 71.8
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 7.5e-25 117.5 81 69.1
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 7.5e-25 117.5 81 65.4
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 7.5e-25 117.5 81 70.4
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.3e-24 116.7 80 68.8
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.7e-24 116.3 80 68.8
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.7e-24 116.3 81 67.9
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 2.2e-24 115.9 82 68.3
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 2.2e-24 115.9 81 67.9
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 2.2e-24 115.9 80 70.0
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 2.2e-24 115.9 87 65.5
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 2.8e-24 115.5 81 70.4
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 2.8e-24 115.5 82 68.3
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.8e-24 115.5 81 66.7
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 2.8e-24 115.5 81 67.9
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 2.8e-24 115.5 81 66.7
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.7e-24 115.2 80 67.5
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 3.7e-24 115.2 81 65.4
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 3.7e-24 115.2 80 68.8
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 3.7e-24 115.2 84 66.7
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 4.8e-24 114.8 81 67.9
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 4.8e-24 114.8 84 65.5
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.8e-24 114.8 84 65.5
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.8e-24 114.8 84 65.5
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 4.8e-24 114.8 81 70.4
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 6.3e-24 114.4 81 69.1
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 6.3e-24 114.4 80 67.5
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 8.2e-24 114.0 108 55.6
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.4e-23 113.2 81 67.9
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.4e-23 113.2 80 67.5
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.8e-23 112.8 81 67.9
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 1.8e-23 112.8 81 69.1
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 2.4e-23 112.5 80 71.2
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.4e-23 112.5 80 68.8
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.4e-23 112.5 81 66.7
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 2.4e-23 112.5 82 65.9
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 3.1e-23 112.1 81 66.7
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 4.1e-23 111.7 80 63.8
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 4.1e-23 111.7 81 67.9
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.1e-23 111.7 79 65.8
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.1e-23 111.7 79 65.8
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 4.1e-23 111.7 79 65.8
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 4.1e-23 111.7 81 67.9
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 7.0e-23 110.9 80 65.0
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.6e-22 109.8 77 71.4
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.6e-22 109.8 80 66.2
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 2.0e-22 109.4 82 65.9
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 2.7e-22 109.0 71 73.2
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 2.7e-22 109.0 80 67.5
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 3.5e-22 108.6 80 65.0
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 3.5e-22 108.6 80 62.5
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 3.5e-22 108.6 80 63.8
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 5.9e-22 107.8 91 59.3
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 7.7e-22 107.5 78 65.4
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.0e-21 107.1 80 65.0
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.3e-21 106.7 80 65.0
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.3e-21 106.7 78 66.7
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.7e-21 106.3 81 65.4
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 2.2e-21 105.9 79 64.6
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 2.9e-21 105.5 108 52.8
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 3.8e-21 105.1 80 63.8
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 3.8e-21 105.1 86 60.5
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 1.5e-20 103.2 80 62.5
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 1.5e-20 103.2 77 66.2
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.9e-20 102.8 80 60.0
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 2.5e-20 102.4 80 62.5
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 2.5e-20 102.4 80 62.5
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 2.5e-20 102.4 80 62.5
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 2.5e-20 102.4 80 62.5
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 2.5e-20 102.4 77 63.6
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 3.2e-20 102.1 78 62.8
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 3.2e-20 102.1 91 56.0
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 4.2e-20 101.7 80 61.2
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 5.5e-20 101.3 80 60.0
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 5.5e-20 101.3 80 62.5
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 5.5e-20 101.3 80 61.2
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.2e-19 100.1 80 62.5
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.2e-19 100.1 80 62.5
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.2e-19 100.1 80 60.0
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 4.7e-19 98.2 80 60.0
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 6.1e-19 97.8 80 60.0
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 8.0e-19 97.4 72 66.7
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.4e-18 96.7 80 60.0
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 1.4e-18 96.7 62 72.6
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.4e-18 96.7 71 64.8
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.4e-18 96.7 81 63.0
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.8e-18 96.3 84 58.3
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.3e-18 95.9 80 57.5
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 8.8e-18 94.0 62 71.0
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.5e-17 93.2 62 72.6
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.2e-14 83.6 85 45.9
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.9e-12 76.3 70 58.6
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.2e-12 75.1 46 73.9
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.2e-11 73.6 56 64.3
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.6e-11 73.2 71 47.9
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 6.8e-10 67.8 71 47.9
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.4e-09 65.1 36 77.8
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 9.8e-09 63.9 78 44.9
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 4.5e-06 55.1 43 55.8
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 4.5e-06 55.1 76 42.1


User provided reference genes

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