Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035661.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.1e-108 396.7 213 100.0
MELO3C031516.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.5e-44 183.7 114 83.3
MELO3C029479.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.1e-39 167.5 104 82.7
MELO3C027571.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.1e-35 151.8 97 81.4
ClCG09G015240 Citrullus lanatus HOM05D000539 ORTHO05D000592 2.3e-26 123.2 113 58.4
ClCG02G012700 Citrullus lanatus HOM05D000539 ORTHO05D000592 8.9e-26 121.3 108 60.2
MELO3C028993.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.2e-24 116.7 73 79.5
MELO3C035432.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.6e-20 102.1 103 51.5
MELO3C000336.2 Cucumis melo HOM05D000539 ORTHO05D000592 7.3e-20 101.7 98 49.0
MELO3C000141.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.2e-19 100.9 98 50.0
MELO3C029907.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.8e-19 99.8 116 44.8
MELO3C032093.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.6e-19 99.4 104 56.7
Sed0019036 Sechium edule HOM05D000539 ORTHO05D000592 1.0e-18 97.8 106 48.1
Sed0019768 Sechium edule HOM05D000539 ORTHO05D000592 5.2e-18 95.5 96 49.0
MELO3C030038.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.9e-15 87.0 91 49.5
CsaV3_5G020430 Cucumis sativus L. HOM05D000539 ORTHO05D000592 1.2e-14 84.3 91 46.2
Sed0002111 Sechium edule HOM05D000539 ORTHO05D000592 1.2e-14 84.3 96 47.9
MELO3C029528.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.7e-14 83.2 52 80.8
Sed0020810 Sechium edule HOM05D000539 ORTHO05D000592 5.0e-13 79.0 62 59.7
MELO3C028628.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.8e-10 70.5 71 46.5
Sed0007296 Sechium edule HOM05D000539 ORTHO05D000592 1.2e-09 67.8 106 38.7
RcHm_v2.0_Chr6g0271071 Rosa chinensis HOM05D000539 ORTHO05D000592 2.0e-09 67.0 89 34.8
MELO3C035383.2 Cucumis melo HOM05D000107 ORTHO05D000592 2.2e-08 63.5 56 51.8
MELO3C030857.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.9e-08 63.2 43 79.1
MELO3C028519.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.9e-08 62.4 38 81.6
RcHm_v2.0_Chr4g0391241 Rosa chinensis HOM05D000539 ORTHO05D000592 8.3e-08 61.6 104 32.7
MELO3C030143.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.1e-07 61.2 114 39.5
MELO3C030669.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.4e-07 60.8 34 88.2
Prupe.6G193600 Prunus persica HOM05D000539 ORTHO05D000233 1.4e-07 60.8 106 29.2
MELO3C029937.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.4e-07 60.1 85 44.7
MELO3C035441.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.4e-07 60.1 51 52.9
MELO3C034746.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.2e-07 59.7 33 90.9
FvH4_7g02151 Fragaria vesca HOM05D000539 ORTHO05D000592 3.2e-07 59.7 107 28.0
MELO3C034413.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.1e-07 59.3 33 87.9
FvH4_1g29808 Fragaria vesca HOM05D000539 ORTHO05D000592 4.1e-07 59.3 107 28.0
FvH4_3g31745 Fragaria vesca HOM05D000539 ORTHO05D000592 4.1e-07 59.3 107 28.0
FvH4_5g19271 Fragaria vesca HOM05D000539 ORTHO05D000233 9.2e-07 58.2 107 28.0
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 9.2e-07 58.2 97 29.9
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.2e-06 57.8 97 29.9
FvH4_3g21081 Fragaria vesca HOM05D000539 ORTHO05D000592 2.7e-06 56.6 95 28.4
Sed0002737 Sechium edule HOM05D000539 ORTHO05D000592 3.5e-06 56.2 96 35.4
Prupe.8G058300 Prunus persica HOM05D000539 ORTHO05D000592 4.6e-06 55.8 93 30.1
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 6.0e-06 55.5 92 32.6
FAN27G1069 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.0e-06 55.5 85 30.6


User provided reference genes

Program Settings