Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035651.2 Cucumis melo HOM05D001356 ORTHO05D005768 1.6e-49 199.1 102 100.0
ClCG01G009870 Citrullus lanatus HOM05D001356 ORTHO05D005768 3.9e-11 71.6 35 100.0
CsaV3_1G045910 Cucumis sativus L. HOM05D001356 ORTHO05D005768 1.1e-10 70.1 35 97.1
Sed0000393 Sechium edule HOM05D001356 ORTHO05D005768 3.3e-10 68.6 35 94.3
MELO3C002901.2 Cucumis melo HOM05D001356 ORTHO05D005768 7.3e-10 67.4 35 94.3
MELO3C033774.2 Cucumis melo HOM05D001356 ORTHO05D005768 7.3e-10 67.4 35 91.4
Sed0003645 Sechium edule HOM05D001356 ORTHO05D005768 9.5e-10 67.0 35 91.4
Thecc.03G137400 Theobroma cacao HOM05D001356 ORTHO05D005768 2.1e-09 65.9 35 91.4
COL.COLO4_16683 Corchorus olitorius HOM05D001356 ORTHO05D005768 3.6e-09 65.1 35 91.4
Aqoxy3G01748 Aquilegia oxysepala HOM05D001356 ORTHO05D005768 1.4e-08 63.2 35 82.9
Duzib205G0014 Durio zibethinus HOM05D001356 ORTHO05D005768 1.4e-08 63.2 35 88.6
Prupe.5G144800 Prunus persica HOM05D001356 ORTHO05D005768 1.8e-08 62.8 35 88.6
Dinv23197 Davidia involucrata HOM05D001356 ORTHO05D005768 2.3e-08 62.4 35 82.9
VMungo1309G3027 Vigna mungo HOM05D001356 ORTHO05D005768 3.1e-08 62.0 35 85.7
MD06G1133700 Malus domestica HOM05D001356 ORTHO05D005768 4.0e-08 61.6 35 82.9
Duzib084G0402 Durio zibethinus HOM05D001356 ORTHO05D005768 5.2e-08 61.2 35 82.9
Lalb_Chr11g0069311 Lupinus albus HOM05D001356 ORTHO05D005768 5.2e-08 61.2 35 82.9
MD14G1150000 Malus domestica HOM05D001356 ORTHO05D005768 5.2e-08 61.2 35 82.9
Phvul.009G163700 Phaseolus vulgaris HOM05D001356 ORTHO05D005768 6.8e-08 60.8 35 85.7
Potri.012G104400 Populus trichocarpa HOM05D001356 ORTHO05D005768 8.9e-08 60.5 35 77.1
Sabra12G0076800 Salix brachista HOM05D001356 ORTHO05D005768 8.9e-08 60.5 35 77.1
Lj1g0001437 Lotus japonicus HOM05D001356 ORTHO05D005768 1.2e-07 60.1 35 82.9
Atru.chr6.1892 Acer truncatum HOM05D001356 ORTHO05D005768 1.5e-07 59.7 35 82.9
Sc04g0000320 Simmondsia chinensis HOM05D001356 ORTHO05D005768 1.5e-07 59.7 35 77.1
Ciclev10031112m.g Citrus clementina HOM05D001356 ORTHO05D005768 2.0e-07 59.3 35 80.0
Glyma.04G199500 Glycine max HOM05D001356 ORTHO05D005768 2.0e-07 59.3 35 82.9
Gohir.A07G047900 Gossypium hirsutum HOM05D001356 ORTHO05D005768 2.0e-07 59.3 35 74.3
Gohir.D07G052200 Gossypium hirsutum HOM05D001356 ORTHO05D005768 2.0e-07 59.3 35 74.3
Gorai.001G055200 Gossypium raimondii HOM05D001356 ORTHO05D005768 2.0e-07 59.3 35 74.3
TWI23G0437 Tripterygium wilfordii HOM05D001356 ORTHO05D005768 2.0e-07 59.3 35 80.0
Ah.02g114680 Amaranthus hybridus HOM05D001356 ORTHO05D005768 2.6e-07 58.9 35 77.1
Glyma.06G166000 Glycine max HOM05D001356 ORTHO05D005768 2.6e-07 58.9 35 82.9
Rhsim12G0178700 Rhododendron simsii HOM05D001356 ORTHO05D005768 2.6e-07 58.9 35 80.0
Ah.11g046540 Amaranthus hybridus HOM05D001356 ORTHO05D005768 3.4e-07 58.5 35 74.3
EL10Ac5g11336 Beta vulgaris HOM05D001356 ORTHO05D005768 3.4e-07 58.5 35 77.1
Cfa018730 Carpinus fangiana HOM05D001356 ORTHO05D005768 3.4e-07 58.5 35 85.7
Haze_07122 Corylus avellana HOM05D001356 ORTHO05D005768 3.4e-07 58.5 35 85.7
Potri.015G103700 Populus trichocarpa HOM05D001356 ORTHO05D005768 3.4e-07 58.5 35 74.3
TWI39G1035 Tripterygium wilfordii HOM05D001356 ORTHO05D005768 3.4e-07 58.5 35 77.1
MSTRG.11257 Avicennia marina HOM05D001356 ORTHO05D005768 4.4e-07 58.2 35 74.3
AUR62034787 Chenopodium quinoa HOM05D001356 ORTHO05D005768 4.4e-07 58.2 35 74.3
MBI11_g14284_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D005768 4.4e-07 58.2 35 74.3
Medtr3g098730 Medicago truncatula HOM05D001356 ORTHO05D005768 4.4e-07 58.2 35 77.1
Lalb_Chr23g0272951 Lupinus albus HOM05D001356 ORTHO05D005768 5.8e-07 57.8 34 82.4
Cpa.g.sc4.117 Carica papaya HOM05D001356 ORTHO05D005768 7.5e-07 57.4 35 82.9
Oeu019019.1 Olea europaea HOM05D001356 ORTHO05D005768 7.5e-07 57.4 35 77.1
TAR629G3251 Trochodendron aralioides HOM05D001356 ORTHO05D005768 7.5e-07 57.4 35 71.4
PSO478G2570 Papaver somniferum HOM05D001356 ORTHO05D005768 9.8e-07 57.0 35 74.3
TPR.G21579 Trifolium pratense HOM05D001356 ORTHO05D005768 9.8e-07 57.0 35 77.1
Manes.06G124800 Manihot esculenta HOM05D001356 ORTHO05D005768 1.3e-06 56.6 35 74.3
CAN.G637.60 Capsicum annuum HOM05D001356 ORTHO05D005768 1.7e-06 56.2 35 71.4
CiPaw.12G001800 Carya illinoinensis HOM05D001356 ORTHO05D005768 1.7e-06 56.2 35 80.0
Aa31LG3G7400 Aethionema arabicum HOM05D001356 ORTHO05D005768 2.2e-06 55.8 35 77.1
PSO017G0138 Papaver somniferum HOM05D001356 ORTHO05D005768 2.2e-06 55.8 35 74.3
Psat5g053840 Pisum sativum HOM05D001356 ORTHO05D005768 2.2e-06 55.8 35 74.3
SalBow5G4223 Salvia bowleyana HOM05D001356 ORTHO05D005768 2.2e-06 55.8 35 74.3
AUR62029532 Chenopodium quinoa HOM05D001356 ORTHO05D005768 2.9e-06 55.5 35 71.4
Oeu058113.1 Olea europaea HOM05D001356 ORTHO05D005768 2.9e-06 55.5 35 71.4
BcaB05g24024 Brassica carinata HOM05D001356 ORTHO05D005768 3.7e-06 55.1 35 77.1
Ca_16078_v3 Cicer arietinum L. HOM05D001356 ORTHO05D005768 4.9e-06 54.7 35 74.3
Peaxi162Scf00171g00113 Petunia axillaris HOM05D001356 ORTHO05D005768 4.9e-06 54.7 35 68.6
PGSC0003DMG400012021 Solanum tuberosum HOM05D001356 ORTHO05D005768 4.9e-06 54.7 35 68.6
Lj5C91T4 Lonicera japonica HOM05D001356 ORTHO05D005768 6.4e-06 54.3 35 74.3
Manes.14G046700 Manihot esculenta HOM05D001356 ORTHO05D005768 6.4e-06 54.3 35 68.6
BcaC01g06057 Brassica carinata HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
BcaC03g14631 Brassica carinata HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
A02p12580 Brassica napus HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
A03p16520 Brassica napus HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
C03p19450 Brassica napus HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
BolC2t08206H Brassica oleracea HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
BolC3t14326H Brassica oleracea HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
BraA02t06316Z Brassica rapa HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
BraA03t10939Z Brassica rapa HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3
Hma1.2p1_0168F.1_g074170 Hydrangea macrophylla HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 77.1
Sp6g13030 Schrenkiella parvula HOM05D001356 ORTHO05D005768 8.3e-06 53.9 35 74.3


User provided reference genes

Program Settings