Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035591.2 Cucumis melo HOM05D001134 ORTHO05D170192 3.0e-93 345.1 168 100.0
MELO3C034443.2 Cucumis melo HOM05D001134 ORTHO05D001035 5.0e-48 194.9 175 61.7
Lj5g0001315 Lotus japonicus HOM05D001134 ORTHO05D001035 1.7e-11 73.6 95 47.4
CsaV3_3G036110 Cucumis sativus L. HOM05D001134 ORTHO05D001035 2.9e-11 72.8 133 39.1
ClCG10G019980 Citrullus lanatus HOM05D001134 ORTHO05D001035 3.7e-11 72.4 133 39.1
Glyma.13G145500 Glycine max HOM05D001134 ORTHO05D001035 1.4e-10 70.5 133 36.8
Phvul.007G150900 Phaseolus vulgaris HOM05D001134 ORTHO05D001035 2.4e-10 69.7 91 49.5
TPR.G21006 Trifolium pratense HOM05D001134 ORTHO05D018148 5.4e-10 68.6 100 45.0
VMungo0720G1911 Vigna mungo HOM05D001134 ORTHO05D001035 9.2e-10 67.8 91 50.5
Sed0001404 Sechium edule HOM05D001134 ORTHO05D001035 1.2e-09 67.4 133 36.1
Medtr7g102840 Medicago truncatula HOM05D001134 ORTHO05D001035 1.6e-09 67.0 133 35.3
Phvul.001G180300 Phaseolus vulgaris HOM05D001134 ORTHO05D001035 2.7e-09 66.2 133 35.3
Cc06_g04420 Coffea canephora HOM05D001134 ORTHO05D001035 3.5e-09 65.9 93 47.3
Prupe.7G127200 Prunus persica HOM05D001134 ORTHO05D001035 3.5e-09 65.9 133 34.6
TAR636G2822 Trochodendron aralioides HOM05D001134 ORTHO05D001035 3.5e-09 65.9 133 35.3
Duzib093G1187 Durio zibethinus HOM05D001134 ORTHO05D001035 4.6e-09 65.5 133 35.3
VMungo1358G0001 Vigna mungo HOM05D001134 ORTHO05D001035 4.6e-09 65.5 93 46.2
Thecc.05G069800 Theobroma cacao HOM05D001134 ORTHO05D001035 5.9e-09 65.1 133 34.6
Cpa.g.sc92.103 Carica papaya HOM05D001134 ORTHO05D001035 7.8e-09 64.7 131 35.1
Eucgr.K02443 Eucalyptus grandis HOM05D001134 ORTHO05D001035 1.0e-08 64.3 93 45.2
Hma1.2p1_0828F.1_g225190 Hydrangea macrophylla HOM05D001134 ORTHO05D001035 1.0e-08 64.3 132 34.1
Medtr1g062970 Medicago truncatula HOM05D001134 ORTHO05D001035 1.0e-08 64.3 92 45.7
COL.COLO4_26931 Corchorus olitorius HOM05D001134 ORTHO05D001035 1.3e-08 63.9 133 35.3
TPR.G32817 Trifolium pratense HOM05D001134 ORTHO05D001035 1.3e-08 63.9 93 44.1
Migut.J00641 Erythranthe guttata HOM05D001134 ORTHO05D001035 1.7e-08 63.5 93 43.0
Glyma.03G184900 Glycine max HOM05D001134 ORTHO05D001035 1.7e-08 63.5 133 33.8
arahy.Tifrunner.gnm1.ann1.10V25C Arachis hypogaea HOM05D001134 ORTHO05D001035 2.3e-08 63.2 95 44.2
MBI18_g39593_MAGBIO Magnolia biondii HOM05D001134 ORTHO05D018148 2.3e-08 63.2 134 35.1
DCAR_017668 Daucus carota HOM05D001134 ORTHO05D001035 3.0e-08 62.8 93 43.0
SalBow3G2117 Salvia bowleyana HOM05D001134 ORTHO05D001035 3.0e-08 62.8 91 45.1
SalBow3G4379 Salvia bowleyana HOM05D001134 ORTHO05D001035 3.0e-08 62.8 91 45.1
Lj2C119T4 Lonicera japonica HOM05D001134 ORTHO05D001035 3.9e-08 62.4 93 44.1
Psat3g041320 Pisum sativum HOM05D001134 ORTHO05D001035 5.0e-08 62.0 131 35.1
Atru.chr8.1766 Acer truncatum HOM05D001134 ORTHO05D001035 8.6e-08 61.2 93 41.9
ATR0006G087 Amborella trichopoda HOM05D001134 ORTHO05D001035 8.6e-08 61.2 93 40.9
Ciclev10011557m.g Citrus clementina HOM05D001134 ORTHO05D001035 8.6e-08 61.2 91 44.0
SMO367G0785 Selaginella moellendorffii HOM05D001134 ORTHO05D001035 8.6e-08 61.2 92 44.6
Actinidia26655 Actinidia chinensis HOM05D001134 ORTHO05D001035 1.1e-07 60.8 91 49.5
TWI74G0283 Tripterygium wilfordii HOM05D001134 ORTHO05D001035 1.1e-07 60.8 93 41.9
Gohir.D01G130300 Gossypium hirsutum HOM05D001134 ORTHO05D001035 1.5e-07 60.5 93 43.0
Hma1.2p1_0564F.1_g179330 Hydrangea macrophylla HOM05D001134 ORTHO05D001035 1.5e-07 60.5 93 43.0
Lsat_1_v5_gn_2_30841 Lactuca sativa HOM05D001134 ORTHO05D001035 1.5e-07 60.5 91 44.0
Manes.09G064400 Manihot esculenta HOM05D001134 ORTHO05D001035 1.5e-07 60.5 91 45.1
Psat3g041360 Pisum sativum HOM05D001134 ORTHO05D001035 1.5e-07 60.5 131 32.8
Aqoxy2G01705 Aquilegia oxysepala HOM05D001134 ORTHO05D001035 1.9e-07 60.1 93 43.0
CAN.G900.17 Capsicum annuum HOM05D001134 ORTHO05D001035 1.9e-07 60.1 91 45.1
Gorai.002G161600 Gossypium raimondii HOM05D001134 ORTHO05D001035 1.9e-07 60.1 93 43.0
Gorai.N011600 Gossypium raimondii HOM05D001134 ORTHO05D001035 1.9e-07 60.1 93 43.0
Sabra05G0030800 Salix brachista HOM05D001134 ORTHO05D001035 1.9e-07 60.1 91 41.8
Zm00001eb168200 Zea mays HOM05D001134 ORTHO05D001035 1.9e-07 60.1 133 33.1
PSO339G2725 Papaver somniferum HOM05D001134 ORTHO05D001035 2.5e-07 59.7 133 33.8
GSVIVG01033665001 Vitis vinifera HOM05D001134 ORTHO05D001035 2.5e-07 59.7 93 43.0
Ca_08915_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 3.3e-07 59.3 110 41.8
Gohir.A01G142200 Gossypium hirsutum HOM05D001134 ORTHO05D001035 3.3e-07 59.3 93 41.9
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 3.3e-07 59.3 131 31.3
Nitab4.5_0003844g0070 Nicotiana tabacum HOM05D001134 ORTHO05D001035 3.3e-07 59.3 131 31.3
Potri.006G122500 Populus trichocarpa HOM05D001134 ORTHO05D001035 3.3e-07 59.3 93 41.9
PGR142G3044 Punica granatum HOM05D001134 ORTHO05D001035 3.3e-07 59.3 93 43.0
CANSAT80G2012 Cannabis sativa HOM05D001134 ORTHO05D001035 4.3e-07 58.9 93 44.1
MELO3C004217.2 Cucumis melo HOM05D001134 ORTHO05D001035 4.3e-07 58.9 131 32.8
Dinv35805 Davidia involucrata HOM05D001134 ORTHO05D001035 4.3e-07 58.9 93 41.9
PSO566G0051 Papaver somniferum HOM05D001134 ORTHO05D001035 4.3e-07 58.9 90 42.2
RcHm_v2.0_Chr3g0470581 Rosa chinensis HOM05D001134 ORTHO05D001035 4.3e-07 58.9 133 31.6
Sed0008252 Sechium edule HOM05D001134 ORTHO05D001035 4.3e-07 58.9 131 32.8
TPR.G32839 Trifolium pratense HOM05D001134 ORTHO05D001035 4.3e-07 58.9 133 33.1
Glyma.19G185401 Glycine max HOM05D001134 ORTHO05D018148 5.6e-07 58.5 133 33.1
MD04G1090600 Malus domestica HOM05D001134 ORTHO05D001035 5.6e-07 58.5 91 41.8
Sc06g0004120 Simmondsia chinensis HOM05D001134 ORTHO05D001035 5.6e-07 58.5 91 41.8
Sopen01g043270 Solanum pennellii HOM05D001134 ORTHO05D001035 5.6e-07 58.5 133 32.3
PGSC0003DMG400024713 Solanum tuberosum HOM05D001134 ORTHO05D001035 5.6e-07 58.5 130 31.5
Lj1g0012731 Lotus japonicus HOM05D001134 ORTHO05D001035 7.3e-07 58.2 133 31.6
Medtr7g102870 Medicago truncatula HOM05D001134 ORTHO05D001035 7.3e-07 58.2 131 33.6
Peaxi162Scf00037g01225 Petunia axillaris HOM05D001134 ORTHO05D001035 7.3e-07 58.2 131 31.3
FvH4_6g06580 Fragaria vesca HOM05D001134 ORTHO05D001035 9.5e-07 57.8 93 38.7
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 9.5e-07 57.8 93 38.7
EL10Ac4g09911 Beta vulgaris HOM05D001134 ORTHO05D001035 1.2e-06 57.4 91 39.6
CSS0037008 Camellia sinensis var. sinensis HOM05D001134 ORTHO05D001035 1.2e-06 57.4 93 41.9
PSO801G0537 Papaver somniferum HOM05D001134 ORTHO05D001035 1.2e-06 57.4 133 33.8
PGR031G0417 Punica granatum HOM05D001134 ORTHO05D001035 1.2e-06 57.4 91 41.8
HPP92_023737 Vanilla planifolia HOM05D001134 ORTHO05D001035 1.2e-06 57.4 111 36.9
Zm00001eb363610 Zea mays HOM05D001134 ORTHO05D001035 1.2e-06 57.4 91 38.5
Nitab4.5_0005019g0050 Nicotiana tabacum HOM05D001134 ORTHO05D001035 1.6e-06 57.0 92 40.2
Oeu041484.1 Olea europaea HOM05D001134 ORTHO05D001035 1.6e-06 57.0 93 41.9
Thecc.05G313200 Theobroma cacao HOM05D001134 ORTHO05D001035 1.6e-06 57.0 93 39.8
AUR62000759 Chenopodium quinoa HOM05D001134 ORTHO05D001035 2.1e-06 56.6 91 40.7
HanXRQChr03g0074711 Helianthus annuus HOM05D001134 ORTHO05D001035 2.1e-06 56.6 132 34.8
SEGI_22508 Sequoiadendron giganteum HOM05D001134 ORTHO05D001035 2.1e-06 56.6 91 42.9
Solyc01g099750.2 Solanum lycopersicum HOM05D001134 ORTHO05D001035 2.1e-06 56.6 132 31.8
AUR62005209 Chenopodium quinoa HOM05D001134 ORTHO05D001035 3.6e-06 55.8 91 40.7
Gohir.A11G268100 Gossypium hirsutum HOM05D001134 ORTHO05D001035 3.6e-06 55.8 91 39.6
Gorai.007G300200 Gossypium raimondii HOM05D001134 ORTHO05D001035 3.6e-06 55.8 91 39.6
Lj3C989T13 Lonicera japonica HOM05D001134 ORTHO05D001035 3.6e-06 55.8 93 41.9
Solyc09g008360.2 Solanum lycopersicum HOM05D001134 ORTHO05D001035 3.6e-06 55.8 101 39.6
CARHR186250 Cardamine hirsuta HOM05D001134 ORTHO05D001035 4.7e-06 55.5 92 38.0
CsaV3_2G006730 Cucumis sativus L. HOM05D001134 ORTHO05D001035 4.7e-06 55.5 131 32.1
Dinv30812 Davidia involucrata HOM05D001134 ORTHO05D001035 4.7e-06 55.5 93 39.8
PSO729G0030 Papaver somniferum HOM05D001134 ORTHO05D001035 4.7e-06 55.5 92 40.2
Sopen09g003180 Solanum pennellii HOM05D001134 ORTHO05D001035 4.7e-06 55.5 101 39.6
CiPaw.10G128500 Carya illinoinensis HOM05D001134 ORTHO05D001035 6.2e-06 55.1 95 41.1
DCAR_015007 Daucus carota HOM05D001134 ORTHO05D001035 6.2e-06 55.1 106 34.0
FvH4_6g16610 Fragaria vesca HOM05D001134 ORTHO05D001035 6.2e-06 55.1 133 30.8
FAN02G0420 Fragaria x ananassa HOM05D001134 ORTHO05D001035 6.2e-06 55.1 133 30.8
FAN05G0581 Fragaria x ananassa HOM05D001134 ORTHO05D001035 6.2e-06 55.1 133 30.8
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 6.2e-06 55.1 91 39.6
FAN09G3683 Fragaria x ananassa HOM05D001134 ORTHO05D001035 6.2e-06 55.1 133 30.8
FAN14G0015 Fragaria x ananassa HOM05D001134 ORTHO05D001035 6.2e-06 55.1 133 30.8
MBI18_g17026_MAGBIO Magnolia biondii HOM05D001134 ORTHO05D001035 6.2e-06 55.1 131 33.6
Manes.08G117300 Manihot esculenta HOM05D001134 ORTHO05D001035 6.2e-06 55.1 91 39.6
SGA_v2.0_scaffold40G15478 Striga asiatica HOM05D001134 ORTHO05D001035 6.2e-06 55.1 91 42.9
HPP92_023734 Vanilla planifolia HOM05D001134 ORTHO05D001035 6.2e-06 55.1 91 40.7
VMungo0540G1096 Vigna mungo HOM05D001134 ORTHO05D001035 6.2e-06 55.1 131 32.8


User provided reference genes

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