Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035573.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.6e-61 238.0 117 100.0
MELO3C032476.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.2e-20 101.3 63 79.4
MELO3C034091.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.7e-18 95.1 49 91.8
CsaV3_1G030680 Cucumis sativus L. HOM05D000616 ORTHO05D000233 4.6e-16 88.2 62 71.0
MELO3C030412.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.0e-15 85.5 49 85.7
MELO3C033564.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.9e-15 85.1 64 70.3
MELO3C034371.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.9e-14 82.8 163 37.4
MELO3C034902.2 Cucumis melo HOM05D000539 ORTHO05D000233 8.9e-12 73.9 73 52.1
MELO3C032706.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.2e-11 73.6 36 91.7
MELO3C035070.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.2e-11 73.6 66 56.1
MELO3C033544.2 Cucumis melo HOM05D000539 ORTHO05D000233 6.4e-10 67.8 76 44.7
CsaV3_5G020000 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.9e-09 66.2 64 54.7
MELO3C028802.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.4e-09 65.9 55 58.2
ClCG10G006990 Citrullus lanatus HOM05D000539 ORTHO05D000233 5.4e-09 64.7 57 59.6
CANSAT56G2878 Cannabis sativa HOM05D000539 ORTHO05D000233 1.6e-08 63.2 66 51.5
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-08 63.2 68 47.1
MELO3C033340.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.1e-08 62.8 53 60.4
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 3.5e-08 62.0 65 49.2
MELO3C031217.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.3e-07 59.3 41 68.3
MELO3C034848.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.1e-07 58.2 47 59.6
FvH4_3g14252 Fragaria vesca HOM05D000539 ORTHO05D000592 5.1e-07 58.2 65 50.8
CsaV3_5G020430 Cucumis sativus L. HOM05D000539 ORTHO05D000592 6.6e-07 57.8 41 70.7
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-06 57.0 66 48.5
FvH4_4g09773 Fragaria vesca HOM05D000539 ORTHO05D000233 1.5e-06 56.6 65 49.2
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.5e-06 56.6 66 53.0
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.5e-06 56.6 66 53.0
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-06 56.6 66 53.0
FAN16G1455 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.5e-06 56.6 66 53.0
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-06 56.6 66 53.0
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-06 56.6 66 53.0
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-06 56.6 66 53.0
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-06 56.6 66 53.0
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-06 56.6 66 53.0
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.5e-06 56.6 66 50.0
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.5e-06 56.6 66 50.0
FAN19G1975 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.9e-06 56.2 65 49.2
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.9e-06 56.2 66 53.0
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.9e-06 56.2 66 53.0
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.9e-06 56.2 66 48.5
MELO3C028363.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.5e-06 55.8 80 37.5
ECA240G4466 Erigeron canadensis HOM05D000539 ORTHO05D000233 3.3e-06 55.5 70 45.7
ECA246G2093 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.3e-06 55.1 65 50.8
FvH4_7g07223 Fragaria vesca HOM05D000539 ORTHO05D000592 4.3e-06 55.1 66 50.0
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 5.6e-06 54.7 66 47.0
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 5.6e-06 54.7 73 39.7
CANSAT54G1566 Cannabis sativa HOM05D000539 ORTHO05D000233 7.3e-06 54.3 63 49.2
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 7.3e-06 54.3 66 43.9
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 7.3e-06 54.3 66 50.0
RcHm_v2.0_Chr4g0385451 Rosa chinensis HOM05D000539 ORTHO05D000233 7.3e-06 54.3 67 47.8
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 7.3e-06 54.3 65 46.2
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 9.5e-06 53.9 66 43.9


User provided reference genes

Program Settings