Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035546.2 Cucumis melo HOM05D001145 ORTHO05D170368 4.2e-101 371.3 184 100.0
MELO3C004867.2 Cucumis melo HOM05D001145 ORTHO05D001415 6.5e-17 91.7 96 56.2
CsaV3_1G014120 Cucumis sativus L. HOM05D001145 ORTHO05D001415 6.5e-17 91.7 96 58.3
Sed0024158 Sechium edule HOM05D001145 ORTHO05D001415 9.4e-16 87.8 101 52.5
ClCG01G013870 Citrullus lanatus HOM05D001145 ORTHO05D001415 1.4e-14 84.0 90 54.4
Glyma.11G192300 Glycine max HOM05D001145 ORTHO05D001415 2.8e-12 76.3 97 47.4
Glyma.12G082100 Glycine max HOM05D001145 ORTHO05D001415 2.8e-12 76.3 97 47.4
Medtr4g057200 Medicago truncatula HOM05D001145 ORTHO05D001415 3.7e-12 75.9 97 48.5
AUR62014978 Chenopodium quinoa HOM05D001145 ORTHO05D001415 1.1e-11 74.3 78 52.6
Phvul.011G086700 Phaseolus vulgaris HOM05D001145 ORTHO05D001415 1.1e-11 74.3 104 45.2
AUR62029149 Chenopodium quinoa HOM05D001145 ORTHO05D001415 2.4e-11 73.2 78 52.6
RcHm_v2.0_Chr5g0056561 Rosa chinensis HOM05D001145 ORTHO05D001415 3.1e-11 72.8 78 51.3
COL.COLO4_19206 Corchorus olitorius HOM05D001145 ORTHO05D001415 4.1e-11 72.4 78 51.3
Eucgr.B03924 Eucalyptus grandis HOM05D001145 ORTHO05D001415 4.1e-11 72.4 78 52.6
arahy.Tifrunner.gnm1.ann1.4585DL Arachis hypogaea HOM05D001145 ORTHO05D001415 5.3e-11 72.0 78 48.7
arahy.Tifrunner.gnm1.ann1.H5NNU3 Arachis hypogaea HOM05D001145 ORTHO05D001415 5.3e-11 72.0 78 48.7
MSTRG.21084 Avicennia marina HOM05D001145 ORTHO05D001415 5.3e-11 72.0 97 47.4
Ca_19325_v3 Cicer arietinum L. HOM05D001145 ORTHO05D001415 7.0e-11 71.6 97 48.5
Lj3g0004371 Lotus japonicus HOM05D001145 ORTHO05D001415 7.0e-11 71.6 97 46.4
Lalb_Chr01g0004621 Lupinus albus HOM05D001145 ORTHO05D001415 9.1e-11 71.2 97 44.3
MD11G1149200 Malus domestica HOM05D001145 ORTHO05D001415 9.1e-11 71.2 78 51.3
QL01p014896 Quercus lobata HOM05D001145 ORTHO05D001415 1.2e-10 70.9 97 44.3
Atru.chr3.3503 Acer truncatum HOM05D001145 ORTHO05D001415 1.6e-10 70.5 80 50.0
Ah.01g014130 Amaranthus hybridus HOM05D001145 ORTHO05D001415 1.6e-10 70.5 78 48.7
Cfa010142 Carpinus fangiana HOM05D001145 ORTHO05D001415 2.0e-10 70.1 79 46.8
CiPaw.14G107000 Carya illinoinensis HOM05D001145 ORTHO05D001415 2.0e-10 70.1 92 45.7
FAN21G3468 Fragaria x ananassa HOM05D001145 ORTHO05D001415 2.0e-10 70.1 78 50.0
Psat7g223720 Pisum sativum HOM05D001145 ORTHO05D001415 2.0e-10 70.1 97 45.4
Sc21g0000340 Simmondsia chinensis HOM05D001145 ORTHO05D001415 2.0e-10 70.1 104 41.3
Prupe.6G113600 Prunus persica HOM05D001145 ORTHO05D001415 3.5e-10 69.3 78 51.3
SGA_v2.0_scaffold27G11573 Striga asiatica HOM05D001145 ORTHO05D001415 3.5e-10 69.3 97 45.4
FAN11G1509 Fragaria x ananassa HOM05D001145 ORTHO05D001415 4.5e-10 68.9 100 42.0
TPR.G36804 Trifolium pratense HOM05D001145 ORTHO05D001415 4.5e-10 68.9 97 46.4
Duzib150G0831 Durio zibethinus HOM05D001145 ORTHO05D001415 5.9e-10 68.6 78 47.4
FvH4_3g30560 Fragaria vesca HOM05D001145 ORTHO05D001415 5.9e-10 68.6 78 48.7
FAN25G1127 Fragaria x ananassa HOM05D001145 ORTHO05D001415 5.9e-10 68.6 78 48.7
Peaxi162Scf00983g00004 Petunia axillaris HOM05D001145 ORTHO05D001415 5.9e-10 68.6 78 48.7
CARHR151160 Cardamine hirsuta HOM05D001145 ORTHO05D001415 7.7e-10 68.2 93 46.2
Haze_23528 Corylus avellana HOM05D001145 ORTHO05D001415 7.7e-10 68.2 79 46.8
Manes.04G012500 Manihot esculenta HOM05D001145 ORTHO05D001415 7.7e-10 68.2 71 50.7
Ciclev10028147m.g Citrus clementina HOM05D001145 ORTHO05D001415 1.0e-09 67.8 78 51.3
PGR102G3025 Punica granatum HOM05D001145 ORTHO05D001415 1.0e-09 67.8 78 48.7
CANSAT64G1016 Cannabis sativa HOM05D001145 ORTHO05D001415 1.7e-09 67.0 78 48.7
Haze_11468 Corylus avellana HOM05D001145 ORTHO05D001415 1.7e-09 67.0 79 45.6
Gohir.D07G109100 Gossypium hirsutum HOM05D001145 ORTHO05D001415 1.7e-09 67.0 78 46.2
Gorai.001G117200 Gossypium raimondii HOM05D001145 ORTHO05D001415 1.7e-09 67.0 78 46.2
THA.LOC104810883 Tarenaya hassleriana HOM05D001145 ORTHO05D001415 1.7e-09 67.0 92 44.6
TWI75G1305 Tripterygium wilfordii HOM05D001145 ORTHO05D001415 2.2e-09 66.6 97 43.3
AT3G44880 Arabidopsis thaliana HOM05D001145 ORTHO05D001415 2.9e-09 66.2 93 45.2
EL10Ac9g22627 Beta vulgaris HOM05D001145 ORTHO05D001415 2.9e-09 66.2 78 46.2
Thecc.09G298000 Theobroma cacao HOM05D001145 ORTHO05D001415 2.9e-09 66.2 78 47.4
Sabra04G0147900 Salix brachista HOM05D001145 ORTHO05D001415 3.8e-09 65.9 97 40.2
CiPaw.13G144900 Carya illinoinensis HOM05D001145 ORTHO05D001415 5.0e-09 65.5 79 45.6
Thhalv10002475m.g Eutrema salsugineum HOM05D001145 ORTHO05D001415 5.0e-09 65.5 93 43.0
unitig_747.g21970 Utricularia gibba HOM05D001145 ORTHO05D001415 5.0e-09 65.5 71 47.9
Actinidia24152 Actinidia chinensis HOM05D001145 ORTHO05D001415 6.5e-09 65.1 78 46.2
VMungo1127G2205 Vigna mungo HOM05D001145 ORTHO05D001415 6.5e-09 65.1 78 46.2
AL5G23340 Arabidopsis lyrata HOM05D001145 ORTHO05D001415 8.5e-09 64.7 93 44.1
Carub.0005s1062 Capsella rubella HOM05D001145 ORTHO05D001415 8.5e-09 64.7 93 44.1
Nitab4.5_0000173g0160 Nicotiana tabacum HOM05D001145 ORTHO05D001415 8.5e-09 64.7 78 43.6
Migut.D02297 Erythranthe guttata HOM05D001145 ORTHO05D001415 1.1e-08 64.3 78 44.9
Hma1.2p1_0772F.1_g215990 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 1.1e-08 64.3 78 46.2
Hma1.2p1_0772F.1_g216000 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 1.1e-08 64.3 78 46.2
CSS0024763 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D001415 1.5e-08 63.9 107 41.1
Cc01_g10220 Coffea canephora HOM05D001145 ORTHO05D001415 1.5e-08 63.9 78 41.0
Gohir.A07G105000 Gossypium hirsutum HOM05D001145 ORTHO05D001415 1.5e-08 63.9 78 44.9
unitig_0.g1496 Utricularia gibba HOM05D001145 ORTHO05D001415 1.5e-08 63.9 78 39.7
CDE07G1511 Ceratophyllum demersum HOM05D001145 ORTHO05D001415 2.5e-08 63.2 78 42.3
Haze_23533 Corylus avellana HOM05D001145 ORTHO05D001415 3.2e-08 62.8 78 44.9
Aqoxy2G01627 Aquilegia oxysepala HOM05D001145 ORTHO05D001415 4.2e-08 62.4 98 39.8
DCAR_022680 Daucus carota HOM05D001145 ORTHO05D001415 4.2e-08 62.4 78 44.9
ECA248G1672 Erigeron canadensis HOM05D001145 ORTHO05D001415 4.2e-08 62.4 80 42.5
HanXRQChr11g0346011 Helianthus annuus HOM05D001145 ORTHO05D001415 4.2e-08 62.4 80 41.2
Potri.004G217200 Populus trichocarpa HOM05D001145 ORTHO05D001415 4.2e-08 62.4 97 39.2
SEGI_32230 Sequoiadendron giganteum HOM05D001145 ORTHO05D001415 4.2e-08 62.4 79 46.8
Solyc11g066440.2 Solanum lycopersicum HOM05D001145 ORTHO05D001415 4.2e-08 62.4 78 44.9
Sopen11g026190 Solanum pennellii HOM05D001145 ORTHO05D001415 4.2e-08 62.4 78 44.9
Nn2g13867 Nelumbo nucifera HOM05D001145 ORTHO05D001415 5.5e-08 62.0 78 41.0
TAR633G2303 Trochodendron aralioides HOM05D001145 ORTHO05D001415 7.2e-08 61.6 105 41.9
BcaC09g49659 Brassica carinata HOM05D001145 ORTHO05D001415 9.4e-08 61.2 93 41.9
C01p34130 Brassica napus HOM05D001145 ORTHO05D001415 9.4e-08 61.2 93 41.9
BolC1t03382H Brassica oleracea HOM05D001145 ORTHO05D001415 9.4e-08 61.2 93 41.9
A01p26740 Brassica napus HOM05D001145 ORTHO05D001415 1.6e-07 60.5 93 41.9
BraA01t02603Z Brassica rapa HOM05D001145 ORTHO05D001415 1.6e-07 60.5 93 41.9
CAN.G546.53 Capsicum annuum HOM05D001145 ORTHO05D001415 1.6e-07 60.5 78 43.6
ATR0043G010 Amborella trichopoda HOM05D001145 ORTHO05D001415 2.1e-07 60.1 104 36.5
BcaB05g23052 Brassica carinata HOM05D001145 ORTHO05D001415 2.1e-07 60.1 93 40.9
PGSC0003DMG400000457 Solanum tuberosum HOM05D001145 ORTHO05D001415 2.1e-07 60.1 78 43.6
AagrBONN_evm.TU.Sc2ySwM_228.4808 Anthoceros agrestis HOM05D001145 ORTHO05D001415 2.7e-07 59.7 70 50.0
Lsat_1_v5_gn_1_64901 Lactuca sativa HOM05D001145 ORTHO05D001415 2.7e-07 59.7 80 41.2
Nitab4.5_0009628g0010 Nicotiana tabacum HOM05D001145 ORTHO05D001415 2.7e-07 59.7 72 40.3
Aa31LG4G14210 Aethionema arabicum HOM05D001145 ORTHO05D001415 3.6e-07 59.3 78 41.0
SalBow6G5394 Salvia bowleyana HOM05D001145 ORTHO05D001415 3.6e-07 59.3 77 42.9
Sp5g16340 Schrenkiella parvula HOM05D001145 ORTHO05D001415 3.6e-07 59.3 79 43.0
Lj2A1005T32 Lonicera japonica HOM05D001145 ORTHO05D001415 6.1e-07 58.5 78 42.3
Os03g0146400 Oryza sativa ssp. japonica HOM05D001145 ORTHO05D001415 6.1e-07 58.5 104 37.5
PSO339G1579 Papaver somniferum HOM05D001145 ORTHO05D001415 1.0e-06 57.8 79 40.5
Dinv16229 Davidia involucrata HOM05D001145 ORTHO05D001415 1.4e-06 57.4 78 44.9
SMO139G0147 Selaginella moellendorffii HOM05D001145 ORTHO05D001415 2.3e-06 56.6 81 42.0
PSO801G0093 Papaver somniferum HOM05D001145 ORTHO05D001415 5.2e-06 55.5 79 39.2
Mapoly0046s0012 Marchantia polymorpha HOM05D001145 ORTHO05D001415 6.7e-06 55.1 79 41.8


User provided reference genes

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