Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035541.2 Cucumis melo HOM05D001145 ORTHO05D001415 1.3e-32 142.5 74 100.0
CsaV3_1G014120 Cucumis sativus L. HOM05D001145 ORTHO05D001415 4.6e-14 80.9 74 68.9
MELO3C004867.2 Cucumis melo HOM05D001145 ORTHO05D001415 1.0e-13 79.7 74 66.2
ClCG01G013870 Citrullus lanatus HOM05D001145 ORTHO05D001415 5.1e-13 77.4 74 64.9
Sed0024158 Sechium edule HOM05D001145 ORTHO05D001415 4.3e-12 74.3 74 62.2
Sc21g0000340 Simmondsia chinensis HOM05D001145 ORTHO05D001415 9.0e-10 66.6 74 48.6
Prupe.6G113600 Prunus persica HOM05D001145 ORTHO05D001415 7.6e-09 63.5 74 54.1
Ciclev10028147m.g Citrus clementina HOM05D001145 ORTHO05D001415 1.3e-08 62.8 74 54.1
Potri.004G217200 Populus trichocarpa HOM05D001145 ORTHO05D001415 2.2e-08 62.0 74 48.6
QL01p014896 Quercus lobata HOM05D001145 ORTHO05D001415 2.2e-08 62.0 74 51.4
GSVIVG01031457001 Vitis vinifera HOM05D001145 ORTHO05D001415 2.9e-08 61.6 74 52.7
AUR62014978 Chenopodium quinoa HOM05D001145 ORTHO05D001415 3.8e-08 61.2 74 47.3
Aqoxy2G01627 Aquilegia oxysepala HOM05D001145 ORTHO05D001415 4.9e-08 60.8 74 51.4
MD11G1149200 Malus domestica HOM05D001145 ORTHO05D001415 4.9e-08 60.8 74 51.4
CiPaw.14G107000 Carya illinoinensis HOM05D001145 ORTHO05D001415 8.4e-08 60.1 74 51.4
AUR62029149 Chenopodium quinoa HOM05D001145 ORTHO05D001415 8.4e-08 60.1 74 47.3
Lalb_Chr01g0004621 Lupinus albus HOM05D001145 ORTHO05D001415 8.4e-08 60.1 74 50.0
MSTRG.21084 Avicennia marina HOM05D001145 ORTHO05D001415 1.1e-07 59.7 74 50.0
COL.COLO4_19206 Corchorus olitorius HOM05D001145 ORTHO05D001415 1.1e-07 59.7 74 50.0
Duzib150G0831 Durio zibethinus HOM05D001145 ORTHO05D001415 1.1e-07 59.7 74 48.6
Ah.01g014130 Amaranthus hybridus HOM05D001145 ORTHO05D001415 1.4e-07 59.3 74 47.3
Thhalv10002475m.g Eutrema salsugineum HOM05D001145 ORTHO05D001415 1.4e-07 59.3 74 48.6
RcHm_v2.0_Chr5g0056561 Rosa chinensis HOM05D001145 ORTHO05D001415 2.5e-07 58.5 74 51.4
Nitab4.5_0009628g0010 Nicotiana tabacum HOM05D001145 ORTHO05D001415 3.2e-07 58.2 74 45.9
Sabra04G0147900 Salix brachista HOM05D001145 ORTHO05D001415 3.2e-07 58.2 74 45.9
Thecc.09G298000 Theobroma cacao HOM05D001145 ORTHO05D001415 3.2e-07 58.2 74 50.0
EL10Ac9g22627 Beta vulgaris HOM05D001145 ORTHO05D001415 4.2e-07 57.8 74 45.9
PGR102G3025 Punica granatum HOM05D001145 ORTHO05D001415 4.2e-07 57.8 74 50.0
TWI75G1305 Tripterygium wilfordii HOM05D001145 ORTHO05D001415 4.2e-07 57.8 73 49.3
Ca_19325_v3 Cicer arietinum L. HOM05D001145 ORTHO05D001415 5.5e-07 57.4 74 48.6
Glyma.11G192300 Glycine max HOM05D001145 ORTHO05D001415 5.5e-07 57.4 73 49.3
SEGI_32230 Sequoiadendron giganteum HOM05D001145 ORTHO05D001415 5.5e-07 57.4 73 47.9
FAN21G3468 Fragaria x ananassa HOM05D001145 ORTHO05D001415 7.1e-07 57.0 74 50.0
Hma1.2p1_0772F.1_g215990 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 7.1e-07 57.0 74 44.6
Hma1.2p1_0772F.1_g216000 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 7.1e-07 57.0 74 44.6
Dinv16229 Davidia involucrata HOM05D001145 ORTHO05D001415 9.3e-07 56.6 74 45.9
Medtr4g057200 Medicago truncatula HOM05D001145 ORTHO05D001415 9.3e-07 56.6 74 47.3
AL5G23340 Arabidopsis lyrata HOM05D001145 ORTHO05D001415 1.2e-06 56.2 74 45.9
BcaC09g49659 Brassica carinata HOM05D001145 ORTHO05D001415 1.2e-06 56.2 74 47.3
C01p34130 Brassica napus HOM05D001145 ORTHO05D001415 1.2e-06 56.2 74 47.3
BolC1t03382H Brassica oleracea HOM05D001145 ORTHO05D001415 1.2e-06 56.2 74 47.3
Cfa010142 Carpinus fangiana HOM05D001145 ORTHO05D001415 1.2e-06 56.2 74 47.3
Nitab4.5_0000173g0160 Nicotiana tabacum HOM05D001145 ORTHO05D001415 1.2e-06 56.2 74 43.2
PGSC0003DMG400000457 Solanum tuberosum HOM05D001145 ORTHO05D001415 1.2e-06 56.2 74 43.2
CiPaw.13G144900 Carya illinoinensis HOM05D001145 ORTHO05D001415 1.6e-06 55.8 74 48.6
A01p26740 Brassica napus HOM05D001145 ORTHO05D001415 2.1e-06 55.5 74 47.3
BraA01t02603Z Brassica rapa HOM05D001145 ORTHO05D001415 2.1e-06 55.5 74 47.3
FvH4_3g30560 Fragaria vesca HOM05D001145 ORTHO05D001415 2.1e-06 55.5 74 48.6
FAN25G1127 Fragaria x ananassa HOM05D001145 ORTHO05D001415 2.1e-06 55.5 74 48.6
Lj3g0004371 Lotus japonicus HOM05D001145 ORTHO05D001415 2.1e-06 55.5 74 48.6
Peaxi162Scf00983g00004 Petunia axillaris HOM05D001145 ORTHO05D001415 2.1e-06 55.5 74 45.9
Rhsim13G0101100 Rhododendron simsii HOM05D001145 ORTHO05D001415 2.1e-06 55.5 74 41.9
AT3G44880 Arabidopsis thaliana HOM05D001145 ORTHO05D001415 2.7e-06 55.1 74 45.9
Carub.0005s1062 Capsella rubella HOM05D001145 ORTHO05D001415 2.7e-06 55.1 74 45.9
Haze_11468 Corylus avellana HOM05D001145 ORTHO05D001415 2.7e-06 55.1 74 45.9
Haze_23528 Corylus avellana HOM05D001145 ORTHO05D001415 2.7e-06 55.1 74 47.3
Glyma.12G082100 Glycine max HOM05D001145 ORTHO05D001415 2.7e-06 55.1 73 46.6
Solyc11g066440.2 Solanum lycopersicum HOM05D001145 ORTHO05D001415 2.7e-06 55.1 74 43.2
Sopen11g026190 Solanum pennellii HOM05D001145 ORTHO05D001415 2.7e-06 55.1 74 43.2
THA.LOC104810883 Tarenaya hassleriana HOM05D001145 ORTHO05D001415 2.7e-06 55.1 74 45.9
Gohir.A07G105000 Gossypium hirsutum HOM05D001145 ORTHO05D001415 3.5e-06 54.7 74 44.6
Gohir.D07G109100 Gossypium hirsutum HOM05D001145 ORTHO05D001415 3.5e-06 54.7 74 44.6
Gorai.001G117200 Gossypium raimondii HOM05D001145 ORTHO05D001415 3.5e-06 54.7 74 44.6
CSS0024763 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D001415 4.6e-06 54.3 74 41.9
Haze_23533 Corylus avellana HOM05D001145 ORTHO05D001415 4.6e-06 54.3 74 47.3
Oeu007728.1 Olea europaea HOM05D001145 ORTHO05D001415 4.6e-06 54.3 74 40.5
SGA_v2.0_scaffold27G11573 Striga asiatica HOM05D001145 ORTHO05D001415 6.0e-06 53.9 74 43.2
TAR633G2303 Trochodendron aralioides HOM05D001145 ORTHO05D001415 7.9e-06 53.5 74 44.6


User provided reference genes

Program Settings