Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035463.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.5e-101 372.1 185 100.0
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-74 283.5 170 85.9
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-60 236.9 138 86.2
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-58 230.3 225 59.6
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.5e-56 222.6 147 74.1
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-55 220.3 147 76.2
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.0e-42 176.4 101 84.2
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 4.5e-42 175.3 195 46.7
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.9e-42 174.9 171 59.1
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 5.5e-40 168.3 147 55.8
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 9.4e-40 167.5 137 57.7
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.6e-39 166.8 131 71.8
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 3.6e-39 165.6 137 56.9
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 1.0e-38 164.1 137 56.9
COL.COLO4_34392 Corchorus olitorius HOM05D007230 ORTHO05D004756 2.6e-37 159.5 118 63.6
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-35 153.3 143 63.6
Sabra18G0086500 Salix brachista HOM05D007230 ORTHO05D004756 4.1e-35 152.1 136 57.4
MELO3C029836.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.0e-23 111.3 61 88.5
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 1.0e-22 110.9 137 43.1
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-22 110.2 76 65.8
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.3e-22 109.8 154 38.3
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.3e-22 109.8 154 39.6
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.7e-22 108.2 154 40.3
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 8.8e-22 107.8 155 37.4
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.0e-21 106.7 156 38.5
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.6e-21 106.3 154 38.3
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.3e-21 105.9 156 38.5
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.3e-21 105.9 156 38.5
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.7e-21 105.1 154 38.3
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.5e-21 104.8 156 37.8
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.7e-20 103.6 75 62.7
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.8e-20 102.8 71 71.8
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.0e-18 96.7 133 40.6
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.7e-18 96.3 180 30.6
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 3.5e-18 95.9 150 36.0
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 4.5e-18 95.5 150 36.0
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 4.5e-18 95.5 150 36.0
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-17 94.0 150 35.3
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-17 94.0 150 35.3
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 1.7e-17 93.6 146 33.6
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 6.5e-17 91.7 150 35.3
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 8.5e-17 91.3 172 30.8
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 8.5e-17 91.3 172 30.8
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 8.5e-17 91.3 172 30.8
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-16 90.1 172 30.8
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 2.5e-16 89.7 150 32.0
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 3.2e-16 89.4 166 30.7
QL09p018296 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-15 87.4 160 34.4
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-15 86.7 173 29.5
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 4.7e-15 85.5 172 29.7
PSO063G0989 Papaver somniferum HOM05D007230 ORTHO05D004756 1.0e-14 84.3 127 33.9
PSO675G6160 Papaver somniferum HOM05D000002 ORTHO05D004756 3.0e-14 82.8 126 32.5
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-14 82.4 148 31.1
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 6.8e-14 81.6 148 31.1
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 6.8e-14 81.6 148 31.8
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 2.0e-13 80.1 148 31.1
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-13 80.1 148 31.8
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 2.6e-13 79.7 145 33.8
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 2.6e-13 79.7 148 30.4
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-13 79.3 148 31.1
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 4.4e-13 79.0 148 30.4
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 5.7e-13 78.6 120 34.2
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 5.7e-13 78.6 120 34.2
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-13 78.2 148 30.4
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-13 78.2 148 31.1
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 1.3e-12 77.4 52 71.2
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 2.2e-12 76.6 148 30.4
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 4.8e-12 75.5 148 29.7
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 4.8e-12 75.5 148 29.7
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 4.8e-12 75.5 148 29.7
SHI05604 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-12 75.1 120 34.2
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 8.3e-12 74.7 148 31.1
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 8.3e-12 74.7 123 32.5
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.1e-11 74.3 148 29.1
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-11 74.3 120 33.3
COL.COLO4_09335 Corchorus olitorius HOM05D007230 ORTHO05D004756 1.8e-11 73.6 123 34.1
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-11 72.0 150 30.7
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-11 72.0 120 33.3
MELO3C031455.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.0e-11 71.6 39 84.6
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-11 71.2 120 33.3
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 1.2e-10 70.9 137 29.9
CSS0040816 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-10 70.9 117 32.5
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.6e-10 70.5 151 25.8
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 1.6e-10 70.5 148 25.7
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 2.0e-10 70.1 119 30.3
Rhsim11G0089400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.7e-10 69.7 136 33.8
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 4.5e-10 68.9 141 29.8
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-10 68.6 137 28.5
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 1.0e-09 67.8 69 40.6
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-09 67.8 134 29.9
COL.COLO4_28935 Corchorus olitorius HOM05D007230 ORTHO05D004756 2.9e-09 66.2 134 28.4
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.8e-09 65.9 82 39.0
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 5.0e-09 65.5 159 26.4
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-08 64.3 68 52.9
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 1.1e-08 64.3 142 28.9
Aqoxy5G03695 Aquilegia oxysepala HOM05D000002 ORTHO05D004756 1.5e-08 63.9 124 29.0
CSS0046298 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.5e-08 63.9 127 29.1
Ah.06g182540 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.9e-08 63.5 125 28.8
Sopen03g016180 Solanum pennellii HOM05D000006 ORTHO05D000001 3.2e-08 62.8 125 30.4
Sopen04g002540 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-08 62.8 125 30.4
vmacro05503 Vaccinium macrocarpon HOM05D002996 ORTHO05D004756 3.2e-08 62.8 165 24.2
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 5.5e-08 62.0 85 34.1
AUR62041465 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.2e-07 60.8 127 28.3
PSO063G3207 Papaver somniferum HOM05D007908 ORTHO05D009653 1.2e-07 60.8 124 29.0
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 1.2e-07 60.8 117 29.9
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 1.2e-07 60.8 137 27.7
RhsimUnG0057000 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.2e-07 60.8 149 25.5
CSS0043144 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.6e-07 60.5 69 42.0
ECA232G4252 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 60.5 133 34.6
ECA232G3985 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-07 60.1 125 31.2
Hma1.2p1_1655F.1_g295950 Hydrangea macrophylla HOM05D007230 ORTHO05D004756 2.1e-07 60.1 146 23.3
PSO017G2245 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-07 60.1 73 37.0
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.1e-07 60.1 149 25.5
Rhsim13G0148200 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.1e-07 60.1 149 25.5
RhsimUnG0157400 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.1e-07 60.1 149 25.5
PSO170G3518 Papaver somniferum HOM05D007230 ORTHO05D004756 2.8e-07 59.7 62 43.5
Manes.14G134321 Manihot esculenta HOM05D007230 ORTHO05D004756 3.6e-07 59.3 108 30.6
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 3.6e-07 59.3 132 31.1
Ah.12g058030 Amaranthus hybridus HOM05D000002 ORTHO05D000047 4.7e-07 58.9 121 29.8
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.7e-07 58.9 45 60.0
SHI00533 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-07 58.9 157 27.4
SHI22439 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-07 58.9 157 26.8
SHI30744 Sapria himalayana HOM05D000002 ORTHO05D004756 4.7e-07 58.9 111 30.6
COL.COLO4_21692 Corchorus olitorius HOM05D007230 ORTHO05D004756 6.1e-07 58.5 36 72.2
Nn4g25076 Nelumbo nucifera HOM05D000414 ORTHO05D009653 6.1e-07 58.5 120 28.3
THA.LOC104798893 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 6.1e-07 58.5 160 28.1
TPR.G9895 Trifolium pratense HOM05D007908 ORTHO05D009653 6.1e-07 58.5 111 35.1
PGR031G0692 Punica granatum HOM05D000002 ORTHO05D000047 8.0e-07 58.2 159 27.0
CSS0002158 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.0e-06 57.8 72 41.7
PGR044G0180 Punica granatum HOM05D000002 ORTHO05D000047 1.0e-06 57.8 141 28.4
SHI10167 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 57.8 157 28.7
Ah.12g058440 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.4e-06 57.4 132 27.3
Ah.14g088300 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.4e-06 57.4 132 27.3
PGR142G0044 Punica granatum HOM05D000002 ORTHO05D000047 1.8e-06 57.0 152 23.7
Sopen05g009210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.0 123 30.1
Sopen09g007300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.0 123 30.1
PGSC0003DMG400045810 Solanum tuberosum HOM05D007908 ORTHO05D009653 1.8e-06 57.0 158 28.5
Ah.07g205280 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.3e-06 56.6 129 27.9
CSS0049897 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-06 56.6 64 40.6
ECA240G0418 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-06 56.6 132 28.0
Ah.09g230280 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.0e-06 56.2 144 27.1
ECA234G2160 Erigeron canadensis HOM05D000470 ORTHO05D000348 3.0e-06 56.2 135 30.4
ECA240G0648 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 56.2 186 24.7
Rhsim05G0129400 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.0e-06 56.2 133 30.1
CANSAT78G1870 Cannabis sativa HOM05D000002 ORTHO05D000047 4.0e-06 55.8 121 29.8
Psat5g221080 Pisum sativum HOM05D000002 ORTHO05D000047 4.0e-06 55.8 158 25.9
PGR004G1445 Punica granatum HOM05D000002 ORTHO05D000047 4.0e-06 55.8 109 31.2
PGR044G2298 Punica granatum HOM05D000002 ORTHO05D000047 4.0e-06 55.8 109 31.2
Sopen07g026850 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-06 55.8 123 30.1
PGSC0003DMG400015663 Solanum tuberosum HOM05D007908 ORTHO05D009653 4.0e-06 55.8 144 29.2
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-06 55.5 104 30.8
MD17G1267900 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-06 55.5 133 24.1
Rhsim05G0175500 Rhododendron simsii HOM05D000244 ORTHO05D000047 5.2e-06 55.5 128 30.5
Sopen02g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.5 149 27.5
TWI77G1008 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 5.2e-06 55.5 150 24.7
Ah.06g181200 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.8e-06 55.1 122 27.9
Ah.10g035860 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.8e-06 55.1 125 28.8
CANSAT35G1454 Cannabis sativa HOM05D000002 ORTHO05D000047 6.8e-06 55.1 134 29.9
ECA233G4906 Erigeron canadensis HOM05D000002 ORTHO05D000047 6.8e-06 55.1 127 28.3
ECA238G0087 Erigeron canadensis HOM05D000002 ORTHO05D000047 6.8e-06 55.1 132 27.3
Solyc10g009595.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 6.8e-06 55.1 138 29.0
Solyc11g011275.1 Solanum lycopersicum HOM05D000002 ORTHO05D000047 6.8e-06 55.1 138 29.0
Sopen00g010600 Solanum pennellii HOM05D000002 ORTHO05D000047 6.8e-06 55.1 138 29.0
Sopen01g008150 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.1 138 29.0
Sopen01g048330 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.1 138 29.0
Sopen04g023020 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.1 138 29.0
Sopen04g031140 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.1 138 29.0
Sopen09g009900 Solanum pennellii HOM05D000014 ORTHO05D000016 6.8e-06 55.1 150 25.3
Aa31LG10G11130 Aethionema arabicum HOM05D000002 ORTHO05D000047 8.8e-06 54.7 146 27.4
AUR62005061 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.8e-06 54.7 137 26.3
AUR62041521 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.8e-06 54.7 136 27.9
AUR62043221 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.8e-06 54.7 130 26.9
AUR62043299 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.8e-06 54.7 136 27.9
ECA233G3814 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-06 54.7 153 29.4
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.8e-06 54.7 129 27.9
PSO675G4469 Papaver somniferum HOM05D000002 ORTHO05D000001 8.8e-06 54.7 67 37.3
Potri.006G109250 Populus trichocarpa HOM05D007908 ORTHO05D009653 8.8e-06 54.7 113 31.0
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 8.8e-06 54.7 62 41.9
Sopen06g006340 Solanum pennellii HOM05D000002 ORTHO05D000047 8.8e-06 54.7 117 31.6


User provided reference genes

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