Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035435.2 Cucumis melo HOM05D004313 ORTHO05D005036 6.0e-49 197.2 100 100.0
MELO3C017136.2 Cucumis melo HOM05D004313 ORTHO05D005036 1.5e-20 102.8 52 96.2
CsaV3_1G001930 Cucumis sativus L. HOM05D004313 ORTHO05D005036 1.5e-20 102.8 52 96.2
Glyma.17G094800 Glycine max HOM05D004313 ORTHO05D005036 5.8e-20 100.9 52 94.2
Lalb_Chr07g0182441 Lupinus albus HOM05D004313 ORTHO05D005036 5.8e-20 100.9 52 94.2
Sed0007676 Sechium edule HOM05D004313 ORTHO05D005036 5.8e-20 100.9 52 94.2
CANSAT80G2445 Cannabis sativa HOM05D004313 ORTHO05D005036 1.3e-19 99.8 52 92.3
Medtr4g107290 Medicago truncatula HOM05D004313 ORTHO05D005036 1.3e-19 99.8 52 92.3
Phvul.003G195400 Phaseolus vulgaris HOM05D004313 ORTHO05D005036 1.7e-19 99.4 78 67.9
Glyma.05G031900 Glycine max HOM05D004313 ORTHO05D005036 2.9e-19 98.6 69 75.4
ClCG06G016580 Citrullus lanatus HOM05D004313 ORTHO05D005036 3.8e-19 98.2 53 94.3
GSVIVG01007840001 Vitis vinifera HOM05D004313 ORTHO05D005036 3.8e-19 98.2 57 86.0
Ca_21869_v3 Cicer arietinum L. HOM05D004313 ORTHO05D005036 4.9e-19 97.8 52 88.5
VMungo1215G1877 Vigna mungo HOM05D004313 ORTHO05D005036 4.9e-19 97.8 52 92.3
Psat4g054720 Pisum sativum HOM05D004313 ORTHO05D005036 6.4e-19 97.4 52 90.4
CARHR276380 Cardamine hirsuta HOM05D004313 ORTHO05D005036 1.1e-18 96.7 52 88.5
Lj4g0005973 Lotus japonicus HOM05D004313 ORTHO05D005036 1.1e-18 96.7 52 90.4
TAR374G1555 Trochodendron aralioides HOM05D004313 ORTHO05D005036 1.1e-18 96.7 57 84.2
BcaC04g23404 Brassica carinata HOM05D004313 ORTHO05D005036 1.4e-18 96.3 52 88.5
BcaNung01388 Brassica carinata HOM05D004313 ORTHO05D005036 1.4e-18 96.3 52 88.5
A09p07780 Brassica napus HOM05D004313 ORTHO05D005036 1.4e-18 96.3 52 88.5
C09p08680 Brassica napus HOM05D004313 ORTHO05D005036 1.4e-18 96.3 52 88.5
BolC9t53779H Brassica oleracea HOM05D004313 ORTHO05D005036 1.4e-18 96.3 52 88.5
BraA09t36426Z Brassica rapa HOM05D004313 ORTHO05D005036 1.4e-18 96.3 52 88.5
Cpa.g.sc391.2 Carica papaya HOM05D004313 ORTHO05D005036 1.4e-18 96.3 52 88.5
Ciclev10018728m.g Citrus clementina HOM05D004313 ORTHO05D005036 1.4e-18 96.3 52 90.4
arahy.Tifrunner.gnm1.ann1.PL6DWX Arachis hypogaea HOM05D004313 ORTHO05D005036 1.9e-18 95.9 52 88.5
Carub.0008s2330 Capsella rubella HOM05D004313 ORTHO05D005036 2.4e-18 95.5 52 88.5
TPR.G38443 Trifolium pratense HOM05D004313 ORTHO05D005036 2.4e-18 95.5 52 88.5
arahy.Tifrunner.gnm1.ann1.ZX441X Arachis hypogaea HOM05D004313 ORTHO05D005036 3.2e-18 95.1 69 69.6
BcaC01g02491 Brassica carinata HOM05D004313 ORTHO05D005036 3.2e-18 95.1 52 86.5
A06p29280 Brassica napus HOM05D004313 ORTHO05D005036 3.2e-18 95.1 52 86.5
C03p64200 Brassica napus HOM05D004313 ORTHO05D005036 3.2e-18 95.1 52 86.5
BolC3t18678H Brassica oleracea HOM05D004313 ORTHO05D005036 3.2e-18 95.1 52 86.5
BraA06t25884Z Brassica rapa HOM05D004313 ORTHO05D005036 3.2e-18 95.1 52 86.5
TAR629G1960 Trochodendron aralioides HOM05D004313 ORTHO05D005036 3.2e-18 95.1 57 80.7
MD06G1183500 Malus domestica HOM05D004313 ORTHO05D005036 4.2e-18 94.7 70 72.9
THA.LOC104818250 Tarenaya hassleriana HOM05D004313 ORTHO05D005036 4.2e-18 94.7 52 86.5
AL8G39490 Arabidopsis lyrata HOM05D004313 ORTHO05D005036 5.4e-18 94.4 52 86.5
Cc04_g16080 Coffea canephora HOM05D004313 ORTHO05D005036 5.4e-18 94.4 57 80.7
Thhalv10003602m.g Eutrema salsugineum HOM05D004313 ORTHO05D005036 5.4e-18 94.4 52 86.5
MBI18_g11290_MAGBIO Magnolia biondii HOM05D004313 ORTHO05D005036 5.4e-18 94.4 57 84.2
Sp2g25780 Schrenkiella parvula HOM05D004313 ORTHO05D005036 5.4e-18 94.4 78 65.4
Prupe.5G182200 Prunus persica HOM05D004313 ORTHO05D005036 9.3e-18 93.6 69 71.0
Eucgr.B00381 Eucalyptus grandis HOM05D004313 ORTHO05D005036 1.2e-17 93.2 52 84.6
Hma1.2p1_0002F.1_g003010 Hydrangea macrophylla HOM05D004313 ORTHO05D005036 1.2e-17 93.2 52 84.6
THA.LOC104819430 Tarenaya hassleriana HOM05D004313 ORTHO05D005036 1.2e-17 93.2 52 84.6
Dinv07987 Davidia involucrata HOM05D004313 ORTHO05D005036 1.6e-17 92.8 57 80.7
MD14G1189400 Malus domestica HOM05D004313 ORTHO05D005036 1.6e-17 92.8 69 69.6
AT5G62600 Arabidopsis thaliana HOM05D004313 ORTHO05D005036 2.1e-17 92.4 52 84.6
Aa31LG11G1040 Aethionema arabicum HOM05D004313 ORTHO05D005036 2.7e-17 92.0 52 84.6
CAN.G628.58 Capsicum annuum HOM05D004313 ORTHO05D005036 4.6e-17 91.3 52 82.7
Dinv13117 Davidia involucrata HOM05D004313 ORTHO05D005036 4.6e-17 91.3 57 78.9
Lj9A456G24 Lonicera japonica HOM05D004313 ORTHO05D005036 4.6e-17 91.3 69 66.7
Manes.06G098800 Manihot esculenta HOM05D004313 ORTHO05D005036 4.6e-17 91.3 52 84.6
Nn4g22972 Nelumbo nucifera HOM05D004313 ORTHO05D005036 4.6e-17 91.3 57 77.2
Nitab4.5_0000758g0080 Nicotiana tabacum HOM05D004313 ORTHO05D005036 4.6e-17 91.3 52 82.7
Peaxi162Scf00689g00546 Petunia axillaris HOM05D004313 ORTHO05D005036 4.6e-17 91.3 52 82.7
Solyc06g071200.3 Solanum lycopersicum HOM05D004313 ORTHO05D005036 4.6e-17 91.3 52 82.7
Sopen06g027510 Solanum pennellii HOM05D004313 ORTHO05D005036 4.6e-17 91.3 52 82.7
TWI60G1492 Tripterygium wilfordii HOM05D004313 ORTHO05D005036 4.6e-17 91.3 52 86.5
DCAR_031273 Daucus carota HOM05D004313 ORTHO05D005036 6.0e-17 90.9 52 80.8
Lsat_1_v5_gn_4_106321 Lactuca sativa HOM05D004313 ORTHO05D005036 6.0e-17 90.9 69 66.7
Oeu022185.1 Olea europaea HOM05D004313 ORTHO05D005036 6.0e-17 90.9 52 82.7
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 1.0e-16 90.1 52 80.8
Nitab4.5_0000003g0130 Nicotiana tabacum HOM05D004313 ORTHO05D005036 1.0e-16 90.1 52 80.8
Potri.015G068600 Populus trichocarpa HOM05D004313 ORTHO05D005036 1.0e-16 90.1 52 84.6
Haze_07414 Corylus avellana HOM05D004313 ORTHO05D005036 1.3e-16 89.7 52 84.6
ECA232G1058 Erigeron canadensis HOM05D004313 ORTHO05D005036 1.3e-16 89.7 69 66.7
Potri.012G073600 Populus trichocarpa HOM05D004313 ORTHO05D005036 1.8e-16 89.4 52 84.6
Cfa019038 Carpinus fangiana HOM05D004313 ORTHO05D005036 2.3e-16 89.0 52 84.6
Atru.chr9.2370 Acer truncatum HOM05D004313 ORTHO05D005036 3.0e-16 88.6 52 82.7
CSS0037121 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 3.0e-16 88.6 52 80.8
CiPaw.12G022100 Carya illinoinensis HOM05D004313 ORTHO05D005036 3.0e-16 88.6 52 84.6
COL.COLO4_07633 Corchorus olitorius HOM05D004313 ORTHO05D005036 3.0e-16 88.6 52 82.7
Duzib205G0385 Durio zibethinus HOM05D004313 ORTHO05D005036 3.0e-16 88.6 52 82.7
HanXRQChr09g0271451 Helianthus annuus HOM05D004313 ORTHO05D005036 3.0e-16 88.6 96 54.2
Hund09391 Selenicereus undatus HOM05D004313 ORTHO05D005036 3.9e-16 88.2 57 75.4
TWI81G0241 Tripterygium wilfordii HOM05D004313 ORTHO05D005036 3.9e-16 88.2 52 82.7
Rhsim08G0163500 Rhododendron simsii HOM05D004313 ORTHO05D005036 5.1e-16 87.8 52 78.8
vmacro19341 Vaccinium macrocarpon HOM05D004313 ORTHO05D005036 5.1e-16 87.8 52 78.8
MSTRG.4395 Avicennia marina HOM05D004313 ORTHO05D005036 6.7e-16 87.4 52 80.8
Gohir.A07G071100 Gossypium hirsutum HOM05D004313 ORTHO05D005036 6.7e-16 87.4 69 65.2
Gohir.D07G075600 Gossypium hirsutum HOM05D004313 ORTHO05D005036 6.7e-16 87.4 69 65.2
Gorai.001G079800 Gossypium raimondii HOM05D004313 ORTHO05D005036 6.7e-16 87.4 69 65.2
Thecc.03G071100 Theobroma cacao HOM05D004313 ORTHO05D005036 6.7e-16 87.4 91 56.0
CiPaw.11G034400 Carya illinoinensis HOM05D004313 ORTHO05D005036 1.1e-15 86.7 52 82.7
Migut.D01890 Erythranthe guttata HOM05D004313 ORTHO05D005036 1.5e-15 86.3 52 80.8
QL10p014006 Quercus lobata HOM05D004313 ORTHO05D005036 1.9e-15 85.9 52 82.7
SalBow3G4066 Salvia bowleyana HOM05D004313 ORTHO05D005036 1.9e-15 85.9 52 78.8
SGA_v2.0_scaffold114G31867 Striga asiatica HOM05D004313 ORTHO05D005036 1.9e-15 85.9 52 78.8
Duzib084G0573 Durio zibethinus HOM05D004313 ORTHO05D005036 2.5e-15 85.5 69 65.2
SEGI_36637 Sequoiadendron giganteum HOM05D004313 ORTHO05D005036 2.5e-15 85.5 57 71.9
FvH4_5g16030 Fragaria vesca HOM05D004313 ORTHO05D005036 3.3e-15 85.1 52 78.8
FAN04G0114 Fragaria x ananassa HOM05D004313 ORTHO05D005036 3.3e-15 85.1 52 78.8
FAN08G2034 Fragaria x ananassa HOM05D004313 ORTHO05D005036 3.3e-15 85.1 52 78.8
FAN13G2316 Fragaria x ananassa HOM05D004313 ORTHO05D005036 3.3e-15 85.1 52 78.8
FAN18G3297 Fragaria x ananassa HOM05D004313 ORTHO05D005036 3.3e-15 85.1 52 78.8
RcHm_v2.0_Chr7g0180041 Rosa chinensis HOM05D004313 ORTHO05D005036 3.3e-15 85.1 69 63.8
Aqoxy3G03179 Aquilegia oxysepala HOM05D004313 ORTHO05D005036 7.4e-15 84.0 52 76.9
Sc12g0005870 Simmondsia chinensis HOM05D004313 ORTHO05D005036 7.4e-15 84.0 57 71.9
ATR0322G074 Amborella trichopoda HOM05D004313 ORTHO05D005036 9.6e-15 83.6 57 71.9
unitig_744.g24392 Utricularia gibba HOM05D004313 ORTHO05D005036 9.6e-15 83.6 52 76.9
SEGI_31090 Sequoiadendron giganteum HOM05D004313 ORTHO05D005036 1.3e-14 83.2 57 66.7
PSO591G0306 Papaver somniferum HOM05D004313 ORTHO05D005036 1.6e-14 82.8 69 62.3
PSO832G0682 Papaver somniferum HOM05D004313 ORTHO05D005036 1.6e-14 82.8 69 62.3
CSS0019418 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 2.1e-14 82.4 52 76.9
SHI08465 Sapria himalayana HOM05D004313 ORTHO05D005036 2.1e-14 82.4 51 74.5
CDE05G2166 Ceratophyllum demersum HOM05D004313 ORTHO05D005036 4.8e-14 81.3 52 73.1
Ah.11g045580 Amaranthus hybridus HOM05D004313 ORTHO05D005036 6.2e-14 80.9 52 73.1
AUR62008311 Chenopodium quinoa HOM05D004313 ORTHO05D005036 6.2e-14 80.9 91 51.6
AUR62021785 Chenopodium quinoa HOM05D004313 ORTHO05D005036 6.2e-14 80.9 91 51.6
unitig_21.g20456 Utricularia gibba HOM05D004313 ORTHO05D005036 8.1e-14 80.5 52 73.1
EL10Ac5g10873 Beta vulgaris HOM05D004313 ORTHO05D005036 1.4e-13 79.7 57 68.4
Os10g0477800 Oryza sativa ssp. japonica HOM05D004313 ORTHO05D005036 1.8e-13 79.3 52 73.1
HPP92_025605 Vanilla planifolia HOM05D004313 ORTHO05D005036 1.8e-13 79.3 63 63.5
Zm00001eb045810 Zea mays HOM05D004313 ORTHO05D005036 1.2e-12 76.6 52 71.2
AagrBONN_evm.TU.Sc2ySwM_117.3833 Anthoceros agrestis HOM05D004313 ORTHO05D005036 5.8e-12 74.3 52 67.3
Zm00001eb221820 Zea mays HOM05D004313 ORTHO05D005036 2.2e-11 72.4 52 67.3
Pp3c11_11570 Physcomitrium patens HOM05D004313 ORTHO05D005036 3.8e-11 71.6 52 65.4
SMO144G0109 Selaginella moellendorffii HOM05D004313 ORTHO05D005036 6.5e-11 70.9 52 61.5
Mapoly0187s0007 Marchantia polymorpha HOM05D004313 ORTHO05D005036 9.3e-10 67.0 50 60.0
CBR_g24406 Chara braunii HOM05D004313 ORTHO05D005036 4.6e-09 64.7 49 61.2
MELO3C031896.2 Cucumis melo HOM05D004313 ORTHO05D005036 2.3e-08 62.4 60 60.0


User provided reference genes

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