Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035372.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.2e-82 309.7 150 100.0
MELO3C029201.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.0e-40 169.5 163 57.1
MELO3C027818.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.7e-39 166.4 148 60.1
MELO3C034519.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.4e-39 164.1 123 66.7
MELO3C035035.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.6e-35 150.6 119 63.9
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.1e-34 147.5 113 67.3
MELO3C034970.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.1e-34 147.5 119 62.2
MELO3C030224.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.9e-32 140.6 113 62.8
MELO3C033304.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.3e-31 140.2 119 62.2
MELO3C034551.2 Cucumis melo HOM05D007110 ORTHO05D000233 3.2e-30 135.6 130 57.7
MELO3C028199.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-28 129.4 98 65.3
MELO3C029607.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.3e-26 123.6 115 57.4
MELO3C029129.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.0e-21 104.8 90 61.1
MELO3C030915.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-20 102.8 90 60.0
MELO3C029127.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.7e-20 100.9 136 47.1
MELO3C032064.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-19 100.5 56 83.9
MELO3C032631.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-19 100.5 58 81.0
MELO3C028238.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.5e-19 100.1 57 80.7
MELO3C034440.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.5e-19 100.1 57 80.7
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.5e-19 100.1 113 46.9
MELO3C034491.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.7e-19 97.4 55 83.6
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.3e-18 97.1 113 45.1
MELO3C031430.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.3e-18 97.1 57 77.2
MELO3C027681.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.7e-18 95.5 54 81.5
MELO3C027996.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.7e-18 95.5 56 78.6
MELO3C029153.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.7e-18 95.5 56 76.8
MELO3C035129.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.8e-18 95.1 53 84.9
MELO3C035417.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.3e-18 94.7 56 80.4
MELO3C033540.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.2e-18 94.4 125 46.4
MELO3C034500.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.2e-18 94.4 57 77.2
MELO3C029881.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.2e-16 90.5 56 78.6
ClCG11G007640 Citrullus lanatus HOM05D007110 ORTHO05D000592 1.0e-15 87.4 53 71.7
MELO3C034911.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.5e-15 84.3 75 58.7
MELO3C028426.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.1e-13 79.7 82 53.7
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 1.1e-11 73.9 127 39.4
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 1.5e-11 73.6 57 57.9
Sed0024905 Sechium edule HOM05D000539 ORTHO05D000592 9.7e-11 70.9 117 34.2
MELO3C035597.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.3e-10 70.5 98 46.9
CsaV3_3G028110 Cucumis sativus L. HOM05D007110 ORTHO05D000592 2.8e-10 69.3 42 71.4
MELO3C031851.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-09 67.4 34 88.2
SHI25573 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-09 67.4 84 38.1
MELO3C029556.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.4e-09 67.0 34 85.3
Sed0026544 Sechium edule HOM05D000539 ORTHO05D000592 1.8e-09 66.6 117 32.5
MELO3C035580.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.1e-09 65.9 90 40.0
MELO3C021501.2 Cucumis melo HOM05D000502 ORTHO05D000356 1.2e-08 63.9 36 80.6
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-08 63.9 111 32.4
Ciclev10012877m.g Citrus clementina HOM05D000539 ORTHO05D000592 1.5e-08 63.5 114 31.6
SHI07450 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-08 63.5 80 37.5
MELO3C034441.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.0e-08 63.2 33 84.8
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.0e-08 63.2 101 31.7
SHI29962 Sapria himalayana HOM05D000616 ORTHO05D000233 2.6e-08 62.8 82 36.6
Atru.chr1.738 Acer truncatum HOM05D000539 ORTHO05D000592 3.4e-08 62.4 125 32.0
Rhsim08G0058500 Rhododendron simsii HOM05D000539 ORTHO05D000592 3.4e-08 62.4 113 29.2
Rhsim08G0058700 Rhododendron simsii HOM05D000539 ORTHO05D000592 3.4e-08 62.4 113 29.2
MELO3C029067.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.5e-08 62.0 109 31.2
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-08 62.0 101 29.7
MELO3C031391.2 Cucumis melo HOM05D000539 ORTHO05D000592 7.7e-08 61.2 88 36.4
MELO3C032093.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-07 60.5 121 29.8
MD01G1047900 Malus domestica HOM05D000539 ORTHO05D000592 1.3e-07 60.5 64 43.8
SHI00755 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-07 60.5 118 29.7
MELO3C000336.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.7e-07 60.1 88 36.4
MELO3C028463.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.7e-07 60.1 88 36.4
MELO3C033256.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.7e-07 60.1 37 75.7
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 1.7e-07 60.1 54 51.9
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 1.7e-07 60.1 54 51.9
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 2.2e-07 59.7 54 51.9
MELO3C030218.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.0e-07 58.5 88 36.4
MELO3C030782.2 Cucumis melo HOM05D000002 ORTHO05D000001 5.0e-07 58.5 30 90.0
Ciclev10005682m.g Citrus clementina HOM05D000539 ORTHO05D000592 6.5e-07 58.2 109 30.3
MELO3C027777.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.5e-07 58.2 90 41.1
MELO3C035055.2 Cucumis melo HOM05D000004 ORTHO05D000002 1.1e-06 57.4 106 30.2
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 1.1e-06 57.4 54 50.0
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.1e-06 57.4 127 27.6
MELO3C027967.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.4e-06 57.0 109 27.5
MELO3C033511.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.4e-06 57.0 111 30.6
FAN10G3810 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-06 57.0 90 32.2
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.9e-06 56.6 100 29.0
SHI38698 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-06 56.6 78 30.8
MELO3C034193.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.5e-06 55.1 106 30.2
MELO3C029090.2 Cucumis melo HOM05D008781 ORTHO05D000592 7.2e-06 54.7 117 30.8
MELO3C030161.2 Cucumis melo HOM05D000539 ORTHO05D000592 7.2e-06 54.7 106 29.2
SHI07672 Sapria himalayana HOM05D000616 ORTHO05D000233 9.4e-06 54.3 77 36.4
SHI35917 Sapria himalayana HOM05D000616 ORTHO05D000233 9.4e-06 54.3 78 29.5


User provided reference genes

Program Settings