Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035234.2 Cucumis melo HOM05D001521 ORTHO05D001342 2.4e-65 251.9 117 100.0
MELO3C000313.2 Cucumis melo HOM05D001521 ORTHO05D001342 4.2e-54 214.5 96 100.0
CsaV3_6G008860 Cucumis sativus L. HOM05D001521 ORTHO05D001342 4.2e-46 188.0 95 85.3
CsaV3_6G008840 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.1e-45 185.7 94 85.1
MELO3C022430.2 Cucumis melo HOM05D001521 ORTHO05D001342 3.3e-14 82.0 107 39.3
CsaV3_6G006950 Cucumis sativus L. HOM05D001521 ORTHO05D001342 7.3e-14 80.9 88 45.5
CsaV3_6G006980 Cucumis sativus L. HOM05D001521 ORTHO05D001342 9.5e-14 80.5 77 46.8
ClCG06G001050 Citrullus lanatus HOM05D001521 ORTHO05D001342 2.8e-13 79.0 76 48.7
ClCG06G001060 Citrullus lanatus HOM05D001521 ORTHO05D001342 3.6e-13 78.6 77 41.6
CsaV3_6G006990 Cucumis sativus L. HOM05D001521 ORTHO05D001342 3.6e-13 78.6 86 41.9
Actinidia11759 Actinidia chinensis HOM05D001521 ORTHO05D001342 6.2e-13 77.8 96 41.7
Sed0020102 Sechium edule HOM05D001521 ORTHO05D001342 6.2e-13 77.8 77 42.9
CsaV3_6G006960 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.1e-12 77.0 73 42.5
CsaV3_6G006970 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.4e-12 76.6 77 42.9
Sed0026868 Sechium edule HOM05D001521 ORTHO05D001342 1.4e-12 76.6 85 42.4
Sed0027182 Sechium edule HOM05D001521 ORTHO05D001342 1.4e-12 76.6 92 40.2
Rhsim05G0011500 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.8e-12 76.3 79 46.8
MELO3C022429.2 Cucumis melo HOM05D001521 ORTHO05D001342 2.3e-12 75.9 77 41.6
GSVIVG01028617001 Vitis vinifera HOM05D001521 ORTHO05D001342 2.3e-12 75.9 91 42.9
Dinv37728 Davidia involucrata HOM05D001521 ORTHO05D001342 5.2e-12 74.7 79 45.6
Rhsim05G0009900 Rhododendron simsii HOM05D001521 ORTHO05D001342 6.8e-12 74.3 95 42.1
Lj4P822T29 Lonicera japonica HOM05D001521 ORTHO05D001342 1.2e-11 73.6 96 41.7
Gohir.D02G009400 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.5e-11 73.2 96 41.7
Gorai.005G011500 Gossypium raimondii HOM05D001521 ORTHO05D001342 1.5e-11 73.2 96 41.7
Rhsim05G0011800 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.5e-11 73.2 101 37.6
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 1.5e-11 73.2 81 45.7
Lj1C599T6 Lonicera japonica HOM05D001521 ORTHO05D001342 2.0e-11 72.8 92 37.0
Lj1P1067T12 Lonicera japonica HOM05D001521 ORTHO05D001342 2.0e-11 72.8 97 37.1
AUR62016613 Chenopodium quinoa HOM05D001521 ORTHO05D001342 2.6e-11 72.4 91 47.3
Prupe.2G097700 Prunus persica HOM05D001521 ORTHO05D001342 2.6e-11 72.4 103 38.8
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 2.6e-11 72.4 93 41.9
Gorai.005G023100 Gossypium raimondii HOM05D001521 ORTHO05D001342 3.4e-11 72.0 107 37.4
Lj1C599T5 Lonicera japonica HOM05D001521 ORTHO05D001342 3.4e-11 72.0 92 37.0
Gohir.D02G009366 Gossypium hirsutum HOM05D001521 ORTHO05D001342 4.4e-11 71.6 93 44.1
Gorai.005G011400 Gossypium raimondii HOM05D001521 ORTHO05D001342 4.4e-11 71.6 93 44.1
Rhsim05G0010000 Rhododendron simsii HOM05D001521 ORTHO05D001342 4.4e-11 71.6 87 40.2
Duzib177G0352 Durio zibethinus HOM05D001521 ORTHO05D001342 5.8e-11 71.2 83 43.4
Duzib177G1034 Durio zibethinus HOM05D001521 ORTHO05D001342 7.5e-11 70.9 83 44.6
Duzib177G1049 Durio zibethinus HOM05D001521 ORTHO05D001342 7.5e-11 70.9 81 44.4
Gohir.D02G018600 Gossypium hirsutum HOM05D001521 ORTHO05D001342 7.5e-11 70.9 93 41.9
Lj1C599T0 Lonicera japonica HOM05D001521 ORTHO05D001342 7.5e-11 70.9 84 40.5
Gohir.A02G009180 Gossypium hirsutum HOM05D001521 ORTHO05D001342 9.9e-11 70.5 93 43.0
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 9.9e-11 70.5 79 43.0
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 9.9e-11 70.5 79 43.0
ClCG06G000920 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.3e-10 70.1 79 48.1
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 1.3e-10 70.1 100 39.0
Dinv37719 Davidia involucrata HOM05D001521 ORTHO05D001342 1.3e-10 70.1 79 44.3
Rhsim05G0011700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.3e-10 70.1 87 39.1
Gohir.D02G009550 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.2e-10 69.3 93 41.9
Lj6P278T5 Lonicera japonica HOM05D001521 ORTHO05D001342 2.2e-10 69.3 77 42.9
Gohir.A02G009200 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.9e-10 68.9 80 45.0
Prupe.2G087400 Prunus persica HOM05D001521 ORTHO05D001342 2.9e-10 68.9 104 36.5
Duzib177G0760 Durio zibethinus HOM05D001521 ORTHO05D001342 3.7e-10 68.6 81 44.4
Sed0027833 Sechium edule HOM05D001521 ORTHO05D001342 3.7e-10 68.6 87 36.8
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 4.9e-10 68.2 91 41.8
Cpa.g.c44888 Carica papaya HOM05D001521 ORTHO05D001342 6.4e-10 67.8 79 43.0
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 6.4e-10 67.8 79 43.0
Duzib192G0699 Durio zibethinus HOM05D001521 ORTHO05D001342 8.3e-10 67.4 83 45.8
Hma1.2p1_0439F.1_g153190 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 8.3e-10 67.4 84 41.7
Oeu035081.1 Olea europaea HOM05D001521 ORTHO05D001342 1.1e-09 67.0 85 38.8
Rhsim05G0009700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.1e-09 67.0 77 41.6
Rhsim07G0026400 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.1e-09 67.0 79 39.2
AUR62011447 Chenopodium quinoa HOM05D001521 ORTHO05D001342 1.4e-09 66.6 100 43.0
AUR62016615 Chenopodium quinoa HOM05D001521 ORTHO05D001342 1.4e-09 66.6 91 46.2
Dinv37733 Davidia involucrata HOM05D001521 ORTHO05D001342 1.4e-09 66.6 78 43.6
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.4e-09 66.6 92 39.1
Sed0019348 Sechium edule HOM05D001521 ORTHO05D001342 1.4e-09 66.6 71 43.7
Duzib177G0128 Durio zibethinus HOM05D001521 ORTHO05D001342 1.9e-09 66.2 83 42.2
Duzib177G0132 Durio zibethinus HOM05D001521 ORTHO05D001342 1.9e-09 66.2 106 35.8
Duzib177G0777 Durio zibethinus HOM05D001521 ORTHO05D001342 1.9e-09 66.2 83 42.2
Gohir.D02G019700 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.9e-09 66.2 81 38.3
Gorai.005G024800 Gossypium raimondii HOM05D001521 ORTHO05D001342 1.9e-09 66.2 81 38.3
Gohir.A02G009300 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.4e-09 65.9 78 42.3
Hma1.2p1_0033F.1_g020950 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 3.2e-09 65.5 78 41.0
Hma1.2p1_0033F.1_g020970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 4.1e-09 65.1 78 41.0
Hma1.2p1_0033F.1_g020980 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 4.1e-09 65.1 78 41.0
Dinv04994 Davidia involucrata HOM05D001521 ORTHO05D001342 5.4e-09 64.7 97 37.1
PSO717G0140 Papaver somniferum HOM05D001521 ORTHO05D001342 7.1e-09 64.3 98 33.7
CSS0010403 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 9.2e-09 63.9 88 39.8
COL.COLO4_27137 Corchorus olitorius HOM05D001521 ORTHO05D001342 9.2e-09 63.9 82 42.7
Duzib192G0018 Durio zibethinus HOM05D001521 ORTHO05D001342 9.2e-09 63.9 83 42.2
ClCG06G003020 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.2e-08 63.5 82 34.1
MELO3C022436.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.2e-08 63.5 93 34.4
Dinv05622 Davidia involucrata HOM05D001521 ORTHO05D001342 1.2e-08 63.5 99 36.4
SalBow6G5371 Salvia bowleyana HOM05D001521 ORTHO05D001342 1.2e-08 63.5 83 39.8
Sed0024723 Sechium edule HOM05D001521 ORTHO05D001342 1.2e-08 63.5 79 41.8
CSS0049728 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 1.6e-08 63.2 89 37.1
Gohir.A02G009148 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.6e-08 63.2 85 41.2
PSO017G3707 Papaver somniferum HOM05D001521 ORTHO05D001342 1.6e-08 63.2 98 33.7
Lj9P654T21 Lonicera japonica HOM05D001521 ORTHO05D001342 2.1e-08 62.8 77 39.0
AUR62011446 Chenopodium quinoa HOM05D001521 ORTHO05D001342 2.7e-08 62.4 92 44.6
CsaV3_6G006870 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.7e-08 62.4 93 34.4
Gorai.005G011900 Gossypium raimondii HOM05D001521 ORTHO05D001342 2.7e-08 62.4 79 41.8
PSO246G0001 Papaver somniferum HOM05D001521 ORTHO05D001342 2.7e-08 62.4 98 33.7
PSO717G0052 Papaver somniferum HOM05D001521 ORTHO05D001342 2.7e-08 62.4 98 33.7
PSO717G0099 Papaver somniferum HOM05D001521 ORTHO05D001342 2.7e-08 62.4 98 33.7
Rhsim05G0010100 Rhododendron simsii HOM05D001521 ORTHO05D001342 3.5e-08 62.0 117 33.3
RcHm_v2.0_Chr1g0337031 Rosa chinensis HOM05D001521 ORTHO05D001342 3.5e-08 62.0 88 39.8
Gohir.D02G009600 Gossypium hirsutum HOM05D001521 ORTHO05D001342 4.6e-08 61.6 79 41.8
SalBow6G1515 Salvia bowleyana HOM05D001521 ORTHO05D001342 4.6e-08 61.6 76 39.5
Hma1.2p1_3600F.1_g336970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.0e-08 61.2 83 37.3
Gohir.A02G016901 Gossypium hirsutum HOM05D001521 ORTHO05D001342 7.8e-08 60.8 103 33.0
MD02G1240000 Malus domestica HOM05D001521 ORTHO05D001342 7.8e-08 60.8 93 36.6
SalBow6G2139 Salvia bowleyana HOM05D001521 ORTHO05D001342 7.8e-08 60.8 77 37.7
MELO3C022437.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.0e-07 60.5 93 33.3
Hma1.2p1_0439F.1_g153130 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.0e-07 60.5 83 36.1
MD02G1240200 Malus domestica HOM05D001521 ORTHO05D001342 1.0e-07 60.5 118 32.2
PSO675G6111 Papaver somniferum HOM05D001521 ORTHO05D001342 1.0e-07 60.5 85 30.6
Ah.06g190230 Amaranthus hybridus HOM05D001521 ORTHO05D001342 1.7e-07 59.7 103 36.9
Gohir.A02G009500 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.7e-07 59.7 91 37.4
Gohir.D02G009800 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.7e-07 59.7 91 38.5
Gorai.005G012100 Gossypium raimondii HOM05D001521 ORTHO05D001342 1.7e-07 59.7 91 37.4
MD07G1171100 Malus domestica HOM05D001521 ORTHO05D001342 1.7e-07 59.7 84 41.7
COL.COLO4_27140 Corchorus olitorius HOM05D001521 ORTHO05D001342 2.3e-07 59.3 93 37.6
Gorai.005G011800 Gossypium raimondii HOM05D001521 ORTHO05D001342 2.3e-07 59.3 84 40.5
Prupe.2G097500 Prunus persica HOM05D001521 ORTHO05D001342 2.3e-07 59.3 90 35.6
CANSAT25G3031 Cannabis sativa HOM05D001521 ORTHO05D001342 3.0e-07 58.9 86 36.0
MD01G1104300 Malus domestica HOM05D001521 ORTHO05D001342 3.0e-07 58.9 84 40.5
ECA233G0417 Erigeron canadensis HOM05D001521 ORTHO05D001342 3.9e-07 58.5 99 35.4
ECA233G3555 Erigeron canadensis HOM05D001521 ORTHO05D001342 3.9e-07 58.5 99 35.4
ECA233G4386 Erigeron canadensis HOM05D001521 ORTHO05D001342 3.9e-07 58.5 99 35.4
MD03G1201500 Malus domestica HOM05D001521 ORTHO05D001342 3.9e-07 58.5 77 35.1
Sed0017234 Sechium edule HOM05D001521 ORTHO05D001342 3.9e-07 58.5 80 41.2
TAR636G2451 Trochodendron aralioides HOM05D001521 ORTHO05D001342 3.9e-07 58.5 73 41.1
ClCG06G003010 Citrullus lanatus HOM05D001521 ORTHO05D001342 6.6e-07 57.8 77 35.1
MELO3C021143.2 Cucumis melo HOM05D001521 ORTHO05D001342 6.6e-07 57.8 80 36.2
Aqoxy7G03595 Aquilegia oxysepala HOM05D001521 ORTHO05D001342 8.6e-07 57.4 77 39.0
Gohir.D02G009700 Gossypium hirsutum HOM05D001521 ORTHO05D001342 8.6e-07 57.4 89 37.1
Gorai.005G012000 Gossypium raimondii HOM05D001521 ORTHO05D001342 8.6e-07 57.4 89 37.1
Sed0023613 Sechium edule HOM05D001521 ORTHO05D001342 8.6e-07 57.4 96 36.5
Sed0028148 Sechium edule HOM05D001521 ORTHO05D001342 8.6e-07 57.4 92 34.8
CSS0039569 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 1.1e-06 57.0 98 34.7
CANSAT21G0839 Cannabis sativa HOM05D001521 ORTHO05D001342 1.1e-06 57.0 81 38.3
Hma1.2p1_0439F.1_g153140 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.1e-06 57.0 78 34.6
PSO409G0016 Papaver somniferum HOM05D001521 ORTHO05D001342 1.1e-06 57.0 77 35.1
Sed0024914 Sechium edule HOM05D001521 ORTHO05D001342 1.1e-06 57.0 93 36.6
MELO3C022434.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.5e-06 56.6 97 38.1
AUR62040541 Chenopodium quinoa HOM05D001521 ORTHO05D001342 1.9e-06 56.2 84 40.5
Sed0023711 Sechium edule HOM05D001521 ORTHO05D001342 1.9e-06 56.2 82 36.6
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 4.3e-06 55.1 101 35.6
Rhsim05G0009800 Rhododendron simsii HOM05D001521 ORTHO05D001342 5.6e-06 54.7 60 40.0
Ah.06g190240 Amaranthus hybridus HOM05D001521 ORTHO05D001342 7.3e-06 54.3 101 34.7


User provided reference genes

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