Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035228.2 Cucumis melo HOM05D008150 ORTHO05D010312 4.2e-203 711.1 340 100.0
CsaV3_6G007970 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.5e-131 473.4 334 72.2
CsaV3_6G008490 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.3e-92 344.0 224 75.9
ClCG06G016080 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.7e-79 300.4 348 50.6
MELO3C035226.2 Cucumis melo HOM05D008150 ORTHO05D010312 3.8e-71 272.7 209 68.9
MELO3C033559.2 Cucumis melo HOM05D008150 ORTHO05D010312 9.4e-62 241.5 342 42.1
CsaV3_1G029060 Cucumis sativus L. HOM05D003072 ORTHO05D008464 1.8e-60 237.3 271 50.9
CsaV3_1G024350 Cucumis sativus L. HOM05D008150 ORTHO05D010312 8.8e-60 235.0 350 42.3
CsaV3_1G028910 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.6e-59 233.4 350 42.6
CsaV3_1G024330 Cucumis sativus L. HOM05D008150 ORTHO05D010312 9.1e-57 224.9 313 44.7
ClCG11G004750 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.5e-51 207.6 342 40.9
CsaV3_1G003460 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.0e-51 207.2 350 43.1
ClCG11G005140 Citrullus lanatus HOM05D008150 ORTHO05D010312 5.3e-49 199.1 347 39.5
Sed0023044 Sechium edule HOM05D008150 ORTHO05D010312 2.5e-46 190.3 337 36.8
CsaV3_1G002720 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.1e-45 187.2 260 45.4
ClCG11G005160 Citrullus lanatus HOM05D008150 ORTHO05D010312 6.8e-44 182.2 330 37.6
Sed0020143 Sechium edule HOM05D008150 ORTHO05D010312 1.2e-43 181.4 338 39.1
Sed0020268 Sechium edule HOM05D008150 ORTHO05D010312 5.7e-43 179.1 336 38.7
CsaV3_1G003470 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.8e-41 174.1 354 40.4
Sed0015862 Sechium edule HOM05D008150 ORTHO05D010312 4.5e-40 169.5 348 36.5
CsaV3_5G038910 Cucumis sativus L. HOM05D008150 ORTHO05D010312 6.5e-39 165.6 267 39.0
Sed0020127 Sechium edule HOM05D008150 ORTHO05D010312 1.5e-38 164.5 349 36.7
Sed0015534 Sechium edule HOM05D008150 ORTHO05D010312 2.1e-37 160.6 331 35.6
CsaV3_5G038900 Cucumis sativus L. HOM05D008150 ORTHO05D010312 4.0e-36 156.4 270 38.9
Sed0019399 Sechium edule HOM05D008150 ORTHO05D010312 6.8e-36 155.6 344 36.0
Sed0026264 Sechium edule HOM05D008150 ORTHO05D010312 9.1e-33 145.2 346 32.7
Sed0027992 Sechium edule HOM05D008150 ORTHO05D010312 7.2e-30 135.6 342 31.0
Sed0022366 Sechium edule HOM05D008150 ORTHO05D010312 6.1e-29 132.5 341 32.6
CsaV3_5G039080 Cucumis sativus L. HOM05D008150 ORTHO05D010312 8.9e-28 128.6 169 43.2
Sed0014209 Sechium edule HOM05D008150 ORTHO05D010312 2.4e-25 120.6 207 38.2
ClCG05G019640 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.2e-24 118.2 113 54.9
ClCG03G016610 Citrullus lanatus HOM05D008150 ORTHO05D010312 5.9e-24 115.9 353 32.0
CsaV3_6G049300 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.0e-23 113.6 353 28.6
ClCG00G005000 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.9e-23 113.2 101 58.4
ClCG06G015730 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.1e-22 111.7 201 38.8
Sed0015391 Sechium edule HOM05D008150 ORTHO05D010312 1.1e-22 111.7 343 30.0
ClCG01G022200 Citrullus lanatus HOM05D008150 ORTHO05D010312 2.5e-22 110.5 350 28.6
CsaV3_1G039380 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.5e-22 110.5 354 29.4
MELO3C007368.2 Cucumis melo HOM05D008150 ORTHO05D010312 5.6e-22 109.4 353 27.8
MELO3C002009.2 Cucumis melo HOM05D008150 ORTHO05D010312 1.2e-21 108.2 361 29.6
Sed0017849 Sechium edule HOM05D008150 ORTHO05D010312 4.7e-21 106.3 351 30.2
Sed0016315 Sechium edule HOM05D008150 ORTHO05D010312 1.4e-20 104.8 243 33.7
ClCG06G016450 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.1e-20 103.6 148 41.9
ClCG10G014280 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.1e-20 103.6 366 29.0
MELO3C015364.2 Cucumis melo HOM05D008150 ORTHO05D010312 4.0e-20 103.2 354 27.4
MELO3C022333.2 Cucumis melo HOM05D002645 ORTHO05D002741 2.0e-19 100.9 322 29.5
Sed0011109 Sechium edule HOM05D008150 ORTHO05D010312 1.3e-18 98.2 344 29.1
Sed0004387 Sechium edule HOM05D008150 ORTHO05D010312 8.3e-18 95.5 362 28.5
ClCG01G016520 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.4e-17 94.7 335 29.3
ClCG05G019650 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.4e-17 94.7 99 57.6
Sed0013863 Sechium edule HOM05D008150 ORTHO05D010312 1.2e-16 91.7 311 27.3
ClCG01G025230 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.3e-15 88.2 363 27.5
Sed0002875 Sechium edule HOM05D008150 ORTHO05D010312 1.7e-15 87.8 317 28.7
Sed0001873 Sechium edule HOM05D008150 ORTHO05D010312 3.9e-15 86.7 341 29.9
Sed0009586 Sechium edule HOM05D008150 ORTHO05D010312 6.6e-15 85.9 317 25.9
Sed0002625 Sechium edule HOM05D008150 ORTHO05D010312 2.5e-14 84.0 253 32.0
CsaV3_3G042360 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.1e-13 80.9 350 26.0
Sed0000604 Sechium edule HOM05D008150 ORTHO05D010312 2.8e-13 80.5 349 28.1
CiPaw.07G080600 Carya illinoinensis HOM05D000007 ORTHO05D000521 4.0e-12 76.6 344 26.5
Sed0025201 Sechium edule HOM05D008150 ORTHO05D010312 5.2e-12 76.3 315 29.2
Sed0019166 Sechium edule HOM05D008150 ORTHO05D010312 2.0e-11 74.3 229 27.1
PSO675G2381 Papaver somniferum HOM05D000007 ORTHO05D000017 2.2e-10 70.9 357 24.4
COL.COLO4_25856 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.7e-10 70.1 317 24.6
COL.COLO4_25431 Corchorus olitorius HOM05D000007 ORTHO05D000521 7.1e-09 65.9 331 25.1
Dinv12543 Davidia involucrata HOM05D000007 ORTHO05D000521 9.2e-09 65.5 367 23.4
Prupe.1G168000 Prunus persica HOM05D000007 ORTHO05D000521 9.2e-09 65.5 223 27.8
Potri.008G215800 Populus trichocarpa HOM05D000007 ORTHO05D000521 1.2e-08 65.1 319 24.5
Migut.C01212 Erythranthe guttata HOM05D000007 ORTHO05D000521 2.7e-08 63.9 327 25.7
Prupe.1G167900 Prunus persica HOM05D000007 ORTHO05D000521 3.5e-08 63.5 205 30.7
TAR624G0469 Trochodendron aralioides HOM05D000007 ORTHO05D000521 6.0e-08 62.8 234 23.1
Migut.C01216 Erythranthe guttata HOM05D000007 ORTHO05D000521 7.8e-08 62.4 287 28.2
CAN.G1008.32 Capsicum annuum HOM05D000007 ORTHO05D000521 2.3e-07 60.8 226 27.0
COL.COLO4_25855 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.0e-07 60.5 354 24.6
Rhsim07G0064300 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.6e-07 59.3 155 27.7
Lj8A117T66 Lonicera japonica HOM05D000007 ORTHO05D000521 1.1e-06 58.5 194 31.4
PSO648G0101 Papaver somniferum HOM05D000007 ORTHO05D000017 1.1e-06 58.5 246 25.2
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.1e-06 58.5 150 28.7
Thecc.01G185300 Theobroma cacao HOM05D000007 ORTHO05D000521 1.5e-06 58.2 319 25.1
Thhalv10012205m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.5e-06 57.4 253 23.7
SGA_v2.0_scaffold136G35012 Striga asiatica HOM05D000664 ORTHO05D000491 3.3e-06 57.0 142 28.2
Duzib138G0537 Durio zibethinus HOM05D000007 ORTHO05D000521 4.3e-06 56.6 323 25.7
ClCG05G002850 Citrullus lanatus HOM05D008150 ORTHO05D010312 5.6e-06 56.2 71 43.7
SGA_v2.0_scaffold24G10526 Striga asiatica HOM05D000007 ORTHO05D000017 5.6e-06 56.2 356 24.7
arahy.Tifrunner.gnm1.ann1.8T5694 Arachis hypogaea HOM05D000007 ORTHO05D000017 7.3e-06 55.8 247 24.3
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 7.3e-06 55.8 242 26.4
Aqoxy1G03078 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 9.5e-06 55.5 275 24.7
Lju225C3T2 Lonicera japonica HOM05D000007 ORTHO05D000039 9.5e-06 55.5 241 24.5
TAR623G1201 Trochodendron aralioides HOM05D000007 ORTHO05D012655 9.5e-06 55.5 252 26.6


User provided reference genes

Program Settings