Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035226.2 Cucumis melo HOM05D008150 ORTHO05D010312 2.2e-106 389.0 205 100.0
MELO3C035228.2 Cucumis melo HOM05D008150 ORTHO05D010312 7.9e-72 274.2 209 68.9
CsaV3_6G008490 Cucumis sativus L. HOM05D008150 ORTHO05D010312 4.9e-66 255.0 205 66.3
CsaV3_6G007970 Cucumis sativus L. HOM05D008150 ORTHO05D010312 6.5e-66 254.6 205 65.9
CsaV3_1G029060 Cucumis sativus L. HOM05D003072 ORTHO05D008464 7.9e-40 167.9 189 49.7
ClCG06G016080 Citrullus lanatus HOM05D008150 ORTHO05D010312 2.2e-37 159.8 189 50.3
MELO3C033559.2 Cucumis melo HOM05D008150 ORTHO05D010312 1.5e-30 137.1 211 37.9
CsaV3_1G024350 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.2e-27 127.5 190 41.6
CsaV3_1G028910 Cucumis sativus L. HOM05D008150 ORTHO05D010312 4.5e-27 125.6 190 41.6
CsaV3_1G024330 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.1e-25 120.9 194 41.2
ClCG11G004750 Citrullus lanatus HOM05D008150 ORTHO05D010312 4.0e-23 112.5 171 40.9
Sed0020268 Sechium edule HOM05D008150 ORTHO05D010312 4.4e-22 109.0 186 36.6
CsaV3_1G003460 Cucumis sativus L. HOM05D008150 ORTHO05D010312 6.3e-21 105.1 179 40.2
Sed0023044 Sechium edule HOM05D008150 ORTHO05D010312 1.8e-20 103.6 174 39.1
Sed0020143 Sechium edule HOM05D008150 ORTHO05D010312 4.1e-20 102.4 199 36.7
CsaV3_1G003470 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.2e-19 100.9 177 42.4
Sed0020127 Sechium edule HOM05D008150 ORTHO05D010312 4.5e-19 99.0 200 36.5
ClCG11G005140 Citrullus lanatus HOM05D008150 ORTHO05D010312 5.0e-18 95.5 180 37.2
ClCG11G005160 Citrullus lanatus HOM05D008150 ORTHO05D010312 4.2e-17 92.4 167 37.1
ClCG06G015730 Citrullus lanatus HOM05D008150 ORTHO05D010312 5.5e-17 92.0 198 39.4
CsaV3_5G039080 Cucumis sativus L. HOM05D008150 ORTHO05D010312 5.5e-17 92.0 124 40.3
ClCG01G016520 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.2e-16 90.9 169 36.7
Sed0019399 Sechium edule HOM05D008150 ORTHO05D010312 4.7e-16 89.0 171 35.1
ClCG05G019650 Citrullus lanatus HOM05D008150 ORTHO05D010312 8.8e-15 84.7 107 52.3
Sed0015534 Sechium edule HOM05D008150 ORTHO05D010312 1.5e-14 84.0 177 35.0
Sed0026264 Sechium edule HOM05D008150 ORTHO05D010312 2.2e-13 80.1 169 32.5
Sed0015862 Sechium edule HOM05D008150 ORTHO05D010312 2.8e-13 79.7 171 35.7
Sed0027992 Sechium edule HOM05D008150 ORTHO05D010312 2.4e-12 76.6 168 32.1
ClCG03G016610 Citrullus lanatus HOM05D008150 ORTHO05D010312 7.0e-12 75.1 174 32.2
CsaV3_1G002720 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.6e-11 73.9 81 50.6
Sed0013863 Sechium edule HOM05D008150 ORTHO05D010312 1.6e-11 73.9 165 33.9
ClCG05G019640 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.5e-11 72.8 53 56.6
MELO3C015364.2 Cucumis melo HOM05D008150 ORTHO05D010312 3.5e-11 72.8 185 30.3
CsaV3_1G039380 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.5e-11 72.8 182 29.7
Potri.007G130600 Populus trichocarpa HOM05D000007 ORTHO05D000521 5.9e-11 72.0 182 31.3
Sed0017849 Sechium edule HOM05D008150 ORTHO05D010312 1.0e-10 71.2 177 31.6
CsaV3_6G049300 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.7e-10 70.5 184 31.0
CsaV3_5G038900 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.9e-10 69.7 111 36.0
ClCG00G005000 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.8e-10 69.3 54 48.1
ClCG10G014280 Citrullus lanatus HOM05D008150 ORTHO05D010312 5.0e-10 68.9 188 30.3
ClCG01G025230 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.1e-09 67.8 199 31.2
CsaV3_5G038910 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.5e-09 67.4 106 37.7
Sed0002875 Sechium edule HOM05D008150 ORTHO05D010312 2.5e-09 66.6 188 28.2
Sed0009722 Sechium edule HOM05D008150 ORTHO05D010312 4.3e-09 65.9 175 30.3
MELO3C007368.2 Cucumis melo HOM05D008150 ORTHO05D010312 5.6e-09 65.5 193 28.0
Sed0015391 Sechium edule HOM05D008150 ORTHO05D010312 5.6e-09 65.5 170 31.8
Sed0022366 Sechium edule HOM05D008150 ORTHO05D010312 5.6e-09 65.5 206 29.6
ClCG01G022200 Citrullus lanatus HOM05D008150 ORTHO05D010312 6.1e-08 62.0 174 32.8
CsaV3_6G008010 Cucumis sativus L. HOM05D008150 ORTHO05D010312 6.1e-08 62.0 167 29.9
Sed0001873 Sechium edule HOM05D008150 ORTHO05D010312 1.0e-07 61.2 170 33.5
Sed0011109 Sechium edule HOM05D008150 ORTHO05D010312 1.4e-07 60.8 170 29.4
CAN.G1036.9 Capsicum annuum HOM05D000007 ORTHO05D000521 1.8e-07 60.5 168 29.8
CSS0020981 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000676 2.3e-07 60.1 169 32.5
Sed0000604 Sechium edule HOM05D008150 ORTHO05D010312 3.0e-07 59.7 186 30.1
CsaV3_3G042360 Cucumis sativus L. HOM05D008150 ORTHO05D010312 6.8e-07 58.5 181 27.1
Sed0009586 Sechium edule HOM05D008150 ORTHO05D010312 6.8e-07 58.5 166 28.9
Sed0016315 Sechium edule HOM05D008150 ORTHO05D010312 6.8e-07 58.5 111 33.3
Lj8A117T66 Lonicera japonica HOM05D000007 ORTHO05D000521 8.9e-07 58.2 174 30.5
Sed0019166 Sechium edule HOM05D008150 ORTHO05D010312 1.5e-06 57.4 162 29.6
QL10p051007 Quercus lobata HOM05D000007 ORTHO05D000521 2.6e-06 56.6 189 27.5
Peaxi162Scf00776g00005 Petunia axillaris HOM05D000007 ORTHO05D000521 3.4e-06 56.2 166 28.3
Atru.chr4.13 Acer truncatum HOM05D000007 ORTHO05D000521 4.4e-06 55.8 174 29.9
MELO3C002009.2 Cucumis melo HOM05D008150 ORTHO05D010312 4.4e-06 55.8 73 38.4
PSO447G0256 Papaver somniferum HOM05D000007 ORTHO05D000017 7.5e-06 55.1 183 26.8
TAR624G0469 Trochodendron aralioides HOM05D000007 ORTHO05D000521 7.5e-06 55.1 61 36.1


User provided reference genes

Program Settings