Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035176.2 Cucumis melo HOM05D010941 ORTHO05D000412 2.3e-108 395.6 201 100.0
CsaV3_6G014900 Cucumis sativus L. HOM05D010941 ORTHO05D000412 1.2e-56 223.8 128 89.1
ClCG02G022070 Citrullus lanatus HOM05D010941 ORTHO05D000412 1.5e-51 206.8 125 84.8
Sed0003716 Sechium edule HOM05D010941 ORTHO05D000412 1.5e-43 180.3 125 73.6
Gorai.009G087000 Gossypium raimondii HOM05D000581 ORTHO05D000412 3.1e-20 102.8 127 44.1
Gohir.D05G085200 Gossypium hirsutum HOM05D010941 ORTHO05D000412 4.0e-20 102.4 106 48.1
Duzib170G0821 Durio zibethinus HOM05D000581 ORTHO05D000412 5.3e-20 102.1 128 45.3
Gohir.A05G082300 Gossypium hirsutum HOM05D010941 ORTHO05D000412 2.6e-19 99.8 106 47.2
QL01p013207 Quercus lobata HOM05D000581 ORTHO05D000412 2.6e-19 99.8 117 48.7
Glyma.13G317900 Glycine max HOM05D000581 ORTHO05D000412 3.8e-18 95.9 122 43.4
CiPaw.13G138400 Carya illinoinensis HOM05D000581 ORTHO05D000412 1.4e-17 94.0 119 42.0
Sabra09G0112800 Salix brachista HOM05D000581 ORTHO05D000412 2.4e-17 93.2 118 45.8
Lalb_Chr24g0395251 Lupinus albus HOM05D000581 ORTHO05D000412 3.2e-17 92.8 128 39.8
TPR.G23789 Trifolium pratense HOM05D010941 ORTHO05D000412 3.2e-17 92.8 122 40.2
PGR102G2836 Punica granatum HOM05D000581 ORTHO05D000412 1.6e-16 90.5 125 46.4
Dinv29449 Davidia involucrata HOM05D000581 ORTHO05D000412 6.0e-16 88.6 122 41.8
GSVIVG01036181001 Vitis vinifera HOM05D010941 ORTHO05D000412 1.7e-15 87.0 109 48.6
Medtr2g085155 Medicago truncatula HOM05D010941 ORTHO05D000412 1.9e-14 83.6 147 34.0
Phvul.005G125700 Phaseolus vulgaris HOM05D000581 ORTHO05D000412 4.3e-14 82.4 122 41.8
Duzib168G0145 Durio zibethinus HOM05D010941 ORTHO05D000412 1.3e-13 80.9 98 44.9
Medtr2g086010 Medicago truncatula HOM05D010941 ORTHO05D000412 3.6e-13 79.3 123 33.3
Cfa010058 Carpinus fangiana HOM05D000581 ORTHO05D000412 1.8e-12 77.0 89 48.3
Lj3g0023809 Lotus japonicus HOM05D010941 ORTHO05D000412 4.0e-12 75.9 101 41.6
VMungo1080G1526 Vigna mungo HOM05D000581 ORTHO05D000412 1.5e-11 73.9 127 37.0
Prupe.6G124800 Prunus persica HOM05D000581 ORTHO05D000412 2.0e-11 73.6 85 49.4
Thecc.09G287400 Theobroma cacao HOM05D010941 ORTHO05D000412 9.9e-11 71.2 85 41.2
MBI17_g16875_MAGBIO Magnolia biondii HOM05D000581 ORTHO05D000412 6.4e-10 68.6 125 29.6
Solyc12g036230.3 Solanum lycopersicum HOM05D010941 ORTHO05D000412 1.9e-09 67.0 143 28.7
Ciclev10029511m.g Citrus clementina HOM05D000581 ORTHO05D000412 5.4e-09 65.5 120 29.2
AagrBONN_evm.TU.Sc2ySwM_117.2310 Anthoceros agrestis HOM05D000581 ORTHO05D000412 9.3e-09 64.7 99 31.3
CDE08G0017 Ceratophyllum demersum HOM05D000581 ORTHO05D000412 4.6e-08 62.4 125 29.6
Sopen12g016360 Solanum pennellii HOM05D010941 ORTHO05D000412 4.6e-08 62.4 122 30.3
COL.COLO4_19933 Corchorus olitorius HOM05D010941 ORTHO05D000412 6.0e-08 62.0 112 34.8
Mapoly0091s0072 Marchantia polymorpha HOM05D000581 ORTHO05D000412 7.9e-08 61.6 111 27.9
CDE06G0806 Ceratophyllum demersum HOM05D000581 ORTHO05D000412 1.0e-07 61.2 120 30.0
Glyma.11G187300 Glycine max HOM05D000581 ORTHO05D000412 1.0e-07 61.2 120 27.5
QL01p013198 Quercus lobata HOM05D000581 ORTHO05D000412 1.0e-07 61.2 108 25.0
RcHm_v2.0_Chr3g0472651 Rosa chinensis HOM05D018852 ORTHO05D000412 1.0e-07 61.2 126 27.0
Duzib093G1459 Durio zibethinus HOM05D000581 ORTHO05D000412 1.8e-07 60.5 120 30.0
Thecc.05G085200 Theobroma cacao HOM05D000581 ORTHO05D000412 1.8e-07 60.5 120 29.2
Atru.chr2.525 Acer truncatum HOM05D000581 ORTHO05D000412 3.0e-07 59.7 122 23.0
CSS0026132 Camellia sinensis var. sinensis HOM05D000581 ORTHO05D000412 3.0e-07 59.7 118 23.7
Dinv31661 Davidia involucrata HOM05D000581 ORTHO05D000412 3.9e-07 59.3 139 27.3
FvH4_6g18230 Fragaria vesca HOM05D018852 ORTHO05D022587 3.9e-07 59.3 126 28.6
VMungo0720G0007 Vigna mungo HOM05D000581 ORTHO05D000412 3.9e-07 59.3 119 26.9
Actinidia05735 Actinidia chinensis HOM05D000581 ORTHO05D000412 5.1e-07 58.9 119 25.2
Aa31LG8G8190 Aethionema arabicum HOM05D000581 ORTHO05D000412 5.1e-07 58.9 120 26.7
Duzib128G0312 Durio zibethinus HOM05D000581 ORTHO05D000412 6.7e-07 58.5 120 27.5
Duzib128G2008 Durio zibethinus HOM05D000581 ORTHO05D000412 8.7e-07 58.2 119 24.4
FAN05G4728 Fragaria x ananassa HOM05D000581 ORTHO05D000412 1.1e-06 57.8 120 26.7
TAR362G1287 Trochodendron aralioides HOM05D000581 ORTHO05D000412 1.1e-06 57.8 119 25.2
Manes.09G059100 Manihot esculenta HOM05D000581 ORTHO05D000412 1.5e-06 57.4 120 31.7
Medtr1g082290 Medicago truncatula HOM05D000581 ORTHO05D000412 1.5e-06 57.4 136 23.5
Eucgr.B01218 Eucalyptus grandis HOM05D000581 ORTHO05D000412 1.9e-06 57.0 111 26.1
Actinidia40207 Actinidia chinensis HOM05D000581 ORTHO05D000412 3.3e-06 56.2 116 25.9
Haze_23422 Corylus avellana HOM05D010941 ORTHO05D000412 3.3e-06 56.2 91 42.9
FvH4_6g04970 Fragaria vesca HOM05D000581 ORTHO05D000412 3.3e-06 56.2 120 25.8
FAN02G3497 Fragaria x ananassa HOM05D000581 ORTHO05D000412 3.3e-06 56.2 120 25.8
FAN05G4004 Fragaria x ananassa HOM05D000581 ORTHO05D000412 3.3e-06 56.2 120 25.8
TAR365G0048 Trochodendron aralioides HOM05D000581 ORTHO05D000412 3.3e-06 56.2 120 24.2
TAR623G0761 Trochodendron aralioides HOM05D000581 ORTHO05D000412 3.3e-06 56.2 102 30.4
Gohir.D09G136500 Gossypium hirsutum HOM05D000581 ORTHO05D000412 4.3e-06 55.8 127 26.8
Gorai.006G156600 Gossypium raimondii HOM05D000581 ORTHO05D000412 5.6e-06 55.5 127 26.8
Solyc01g098400.3 Solanum lycopersicum HOM05D000581 ORTHO05D000412 5.6e-06 55.5 121 24.8
Sopen01g041970 Solanum pennellii HOM05D000581 ORTHO05D000412 5.6e-06 55.5 121 24.8
Ciclev10002761m.g Citrus clementina HOM05D000581 ORTHO05D000412 7.4e-06 55.1 111 26.1
Cc02_g32420 Coffea canephora HOM05D000581 ORTHO05D000412 7.4e-06 55.1 119 23.5
Gohir.A09G232600 Gossypium hirsutum HOM05D000581 ORTHO05D000412 7.4e-06 55.1 111 27.9
Actinidia23447 Actinidia chinensis HOM05D000581 ORTHO05D000412 9.6e-06 54.7 116 25.0
MSTRG.24770 Avicennia marina HOM05D000581 ORTHO05D000412 9.6e-06 54.7 116 24.1
Cpa.g.sc84.120 Carica papaya HOM05D000581 ORTHO05D000412 9.6e-06 54.7 119 21.8


User provided reference genes

Program Settings