Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035094.2 Cucumis melo HOM05D008341 ORTHO05D009679 2.5e-97 358.6 164 100.0
MELO3C027159.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.1e-27 126.3 67 89.6
CsaV3_5G029370 Cucumis sativus L. HOM05D008341 ORTHO05D009679 4.4e-25 118.6 63 84.1
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 1.0e-21 107.5 62 69.4
MELO3C027326.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.1e-18 97.4 58 82.8
MELO3C029097.2 Cucumis melo HOM05D000176 ORTHO05D000106 4.4e-17 92.0 67 68.7
MELO3C031494.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.3e-16 90.5 51 82.4
MELO3C027496.2 Cucumis melo HOM05D000176 ORTHO05D009679 1.4e-15 87.0 46 87.0
CsaV3_5G039840 Cucumis sativus L. HOM05D000176 ORTHO05D000106 1.9e-15 86.7 65 64.6
MELO3C027426.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.2e-15 85.9 50 82.0
MELO3C033541.2 Cucumis melo HOM05D000176 ORTHO05D000106 4.2e-15 85.5 65 61.5
Dinv10054 Davidia involucrata HOM05D000017 ORTHO05D000013 1.6e-14 83.6 116 35.3
ClCG05G015720 Citrullus lanatus HOM05D000176 ORTHO05D000106 1.6e-11 73.6 43 67.4
Dinv10194 Davidia involucrata HOM05D000017 ORTHO05D009679 3.6e-11 72.4 71 43.7
MELO3C027711.2 Cucumis melo HOM05D000176 ORTHO05D000106 6.2e-11 71.6 40 85.0
Dinv44214 Davidia involucrata HOM05D007975 ORTHO05D010011 8.1e-11 71.2 67 43.3
ClCG01G008600 Citrullus lanatus HOM05D000176 ORTHO05D000106 1.1e-10 70.9 40 70.0
Dinv09635 Davidia involucrata HOM05D008341 ORTHO05D009679 1.1e-10 70.9 71 42.3
Dinv20712 Davidia involucrata HOM05D008341 ORTHO05D009679 1.1e-10 70.9 71 43.7
Hma1.2p1_0043F.1_g025800 Hydrangea macrophylla HOM05D008341 ORTHO05D009679 1.8e-10 70.1 69 43.5
Hma1.2p1_2104F.1_g314140 Hydrangea macrophylla HOM05D008341 ORTHO05D009679 1.8e-10 70.1 68 45.6
ClCG09G013770 Citrullus lanatus HOM05D000176 ORTHO05D000106 2.4e-10 69.7 41 65.9
QL08p006036 Quercus lobata HOM05D000017 ORTHO05D007253 3.1e-10 69.3 82 42.7
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 3.1e-10 69.3 82 42.7
Sopen08g006100 Solanum pennellii HOM05D000017 ORTHO05D000013 3.1e-10 69.3 67 46.3
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 4.0e-10 68.9 71 40.8
Dinv16753 Davidia involucrata HOM05D008341 ORTHO05D009679 4.0e-10 68.9 68 45.6
Sopen06g017080 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-10 68.9 67 49.3
Dinv23640 Davidia involucrata HOM05D008341 ORTHO05D009679 5.2e-10 68.6 71 42.3
Dinv12769 Davidia involucrata HOM05D008341 ORTHO05D009679 9.0e-10 67.8 71 40.8
Dinv07965 Davidia involucrata HOM05D008341 ORTHO05D009679 1.2e-09 67.4 71 40.8
QL08p005699 Quercus lobata HOM05D000017 ORTHO05D007253 1.2e-09 67.4 82 41.5
CsaV3_6G016110 Cucumis sativus L. HOM05D000176 ORTHO05D000106 1.5e-09 67.0 54 59.3
QL02p062658 Quercus lobata HOM05D000017 ORTHO05D009679 1.5e-09 67.0 69 46.4
Dinv09463 Davidia involucrata HOM05D007975 ORTHO05D010011 2.6e-09 66.2 74 35.1
Dinv38149 Davidia involucrata HOM05D008341 ORTHO05D009679 3.4e-09 65.9 71 40.8
QL10p055041 Quercus lobata HOM05D000017 ORTHO05D009679 3.4e-09 65.9 69 44.9
Hma1.2p1_0152F.1_g067670 Hydrangea macrophylla HOM05D008341 ORTHO05D009679 4.4e-09 65.5 70 40.0
Peaxi162Scf01517g00007 Petunia axillaris HOM05D009235 ORTHO05D011889 8.4e-08 61.2 65 43.1
Dinv21333 Davidia involucrata HOM05D008341 ORTHO05D009679 1.9e-07 60.1 67 40.3
CSS0024128 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.4e-07 59.7 70 44.3
Dinv02986 Davidia involucrata HOM05D008341 ORTHO05D009679 2.4e-07 59.7 63 44.4
PGSC0003DMG400040773 Solanum tuberosum HOM05D005268 ORTHO05D011324 4.2e-07 58.9 71 40.8
CSS0001578 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.4e-07 58.5 70 42.9
CSS0007981 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.4e-07 58.5 70 42.9
CSS0008184 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.4e-07 58.5 70 42.9
CSS0014296 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.4e-07 58.5 70 42.9
CSS0025680 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.4e-07 58.5 70 42.9
CSS0042409 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.4e-07 58.5 70 42.9
CSS0003513 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.1e-07 58.2 77 32.5
CSS0010991 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.8 77 32.5
CSS0031504 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.8 77 32.5
CSS0034764 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.8 77 32.5
CSS0050215 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.3e-07 57.8 77 32.5
SHI45280 Sapria himalayana HOM05D000017 ORTHO05D000013 9.3e-07 57.8 68 38.2
Dinv08619 Davidia involucrata HOM05D008341 ORTHO05D009679 1.6e-06 57.0 61 39.3
CSS0024407 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.1e-06 56.6 73 34.2
Peaxi162Scf00351g00219 Petunia axillaris HOM05D005268 ORTHO05D011324 2.1e-06 56.6 73 38.4
MELO3C029627.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.5e-06 55.8 51 60.8
CSS0015352 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.6e-06 55.5 68 41.2
Peaxi162Scf00000g08425 Petunia axillaris HOM05D005268 ORTHO05D011324 7.8e-06 54.7 73 37.0
Peaxi162Scf00338g00523 Petunia axillaris HOM05D005268 ORTHO05D011324 7.8e-06 54.7 71 38.0


User provided reference genes

Program Settings