Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035087.2 Cucumis melo HOM05D007849 ORTHO05D009964 6.7e-53 210.3 99 100.0
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 1.6e-17 92.8 69 68.1
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 2.7e-17 92.0 46 89.1
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 4.3e-15 84.7 46 76.1
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 9.9e-12 73.6 65 53.8
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 5.4e-10 67.8 65 47.7
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 9.2e-10 67.0 65 44.6
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 1.2e-09 66.6 65 44.6
Cpa.g.sc81.165 Carica papaya HOM05D007849 ORTHO05D009964 2.1e-09 65.9 41 63.4
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 2.1e-09 65.9 65 47.7
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 2.7e-09 65.5 69 43.5
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 3.5e-09 65.1 65 47.7
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 3.5e-09 65.1 64 45.3
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 6.0e-09 64.3 65 46.2
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 6.0e-09 64.3 44 59.1
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 6.0e-09 64.3 65 44.6
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 7.8e-09 63.9 63 50.8
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 7.8e-09 63.9 65 46.2
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 7.8e-09 63.9 65 41.5
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 1.0e-08 63.5 65 46.2
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 1.0e-08 63.5 64 45.3
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 3.0e-08 62.0 69 46.4
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 3.9e-08 61.6 65 44.6
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 5.1e-08 61.2 65 44.6
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 6.6e-08 60.8 44 54.5
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 8.6e-08 60.5 44 61.4
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 1.5e-07 59.7 64 46.9
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 1.9e-07 59.3 56 50.0
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 2.5e-07 58.9 65 46.2
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 2.5e-07 58.9 65 46.2
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.5e-07 58.9 72 40.3
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 2.5e-07 58.9 72 40.3
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 3.3e-07 58.5 45 53.3
Sc21g0005700 Simmondsia chinensis HOM05D007849 ORTHO05D009964 3.3e-07 58.5 70 40.0
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 5.6e-07 57.8 69 42.0
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 7.3e-07 57.4 42 57.1
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 9.5e-07 57.0 42 57.1
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 9.5e-07 57.0 65 40.0
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 9.5e-07 57.0 58 46.6
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 9.5e-07 57.0 42 47.6
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 1.2e-06 56.6 46 50.0
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 1.2e-06 56.6 65 41.5
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.1e-06 55.8 72 38.9
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 4.7e-06 54.7 44 54.5
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 4.7e-06 54.7 45 53.3
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 8.1e-06 53.9 42 57.1


User provided reference genes

Program Settings