Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034973.2 Cucumis melo HOM05D000157 ORTHO05D004871 2.4e-150 535.4 262 100.0
MELO3C010405.2 Cucumis melo HOM05D000972 ORTHO05D002043 2.7e-24 116.7 182 37.9
MELO3C003422.2 Cucumis melo HOM05D000157 ORTHO05D004871 6.6e-23 112.1 59 84.7
CsaV3_3G049040 Cucumis sativus L. HOM05D000157 ORTHO05D004871 1.2e-21 107.8 59 83.1
Sed0020307 Sechium edule HOM05D000157 ORTHO05D004871 2.7e-16 90.1 65 58.5
Sed0020036 Sechium edule HOM05D000157 ORTHO05D004871 1.9e-14 84.0 60 58.3
RcHm_v2.0_Chr7g0210121 Rosa chinensis HOM05D000157 ORTHO05D004871 1.2e-08 64.7 52 55.8
Ciclev10018251m.g Citrus clementina HOM05D000157 ORTHO05D004871 3.9e-07 59.7 32 68.8
Prupe.5G033100 Prunus persica HOM05D000157 ORTHO05D004871 3.9e-07 59.7 49 57.1
Hma1.2p1_0574F.1_g181550 Hydrangea macrophylla HOM05D000157 ORTHO05D004871 6.6e-07 58.9 56 51.8
Hma1.2p1_1379F.1_g279200 Hydrangea macrophylla HOM05D000157 ORTHO05D004871 6.6e-07 58.9 56 51.8
THA.LOC104827752 Tarenaya hassleriana HOM05D000157 ORTHO05D004871 6.6e-07 58.9 46 56.5
MD06G1036300 Malus domestica HOM05D000157 ORTHO05D004871 8.7e-07 58.5 42 59.5
BcaNung00043 Brassica carinata HOM05D000157 ORTHO05D004871 1.5e-06 57.8 44 54.5
AT4G17920 Arabidopsis thaliana HOM05D000157 ORTHO05D004871 1.9e-06 57.4 46 54.3
Cpa.g.sc90.65 Carica papaya HOM05D000157 ORTHO05D004871 1.9e-06 57.4 44 56.8
Peaxi162Scf00961g00038 Petunia axillaris HOM05D000972 ORTHO05D007902 1.9e-06 57.4 44 56.8
Thhalv10025826m.g Eutrema salsugineum HOM05D000157 ORTHO05D004871 2.5e-06 57.0 46 54.3
Sp7g16180 Schrenkiella parvula HOM05D000157 ORTHO05D004871 2.5e-06 57.0 46 54.3
AL7G36580 Arabidopsis lyrata HOM05D000157 ORTHO05D004871 3.3e-06 56.6 46 54.3
Carub.0007s2341 Capsella rubella HOM05D000157 ORTHO05D004871 3.3e-06 56.6 46 54.3
Actinidia25973 Actinidia chinensis HOM05D004949 ORTHO05D006006 4.3e-06 56.2 42 59.5
CARHR224660 Cardamine hirsuta HOM05D000157 ORTHO05D004871 5.6e-06 55.8 38 60.5
Rhsim11G0016900 Rhododendron simsii HOM05D000157 ORTHO05D004871 5.6e-06 55.8 42 57.1
BcaC09g51584 Brassica carinata HOM05D000157 ORTHO05D004871 7.3e-06 55.5 54 46.3
A01p09970 Brassica napus HOM05D000157 ORTHO05D004871 7.3e-06 55.5 54 46.3
C01p11770 Brassica napus HOM05D000157 ORTHO05D004871 7.3e-06 55.5 54 46.3
C07p49260 Brassica napus HOM05D000157 ORTHO05D004871 7.3e-06 55.5 44 54.5
BolC1t01139H Brassica oleracea HOM05D000157 ORTHO05D004871 7.3e-06 55.5 54 46.3
BraA01t00941Z Brassica rapa HOM05D000157 ORTHO05D004871 7.3e-06 55.5 54 46.3
FAN04G2730 Fragaria x ananassa HOM05D000157 ORTHO05D004871 7.3e-06 55.5 53 50.9


User provided reference genes

Program Settings