Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034962.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.4e-124 448.4 228 100.0
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.6e-87 323.9 232 73.3
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.1e-85 318.9 245 70.6
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.6e-84 314.3 268 64.9
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.4e-72 276.9 222 66.7
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.8e-70 269.2 193 73.6
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.1e-65 251.5 264 58.3
MELO3C033464.2 Cucumis melo HOM05D007209 ORTHO05D000921 8.0e-57 224.6 150 75.3
MELO3C030265.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-55 220.7 273 51.6
MELO3C034270.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.2e-48 195.3 110 88.2
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.7e-47 191.8 219 54.3
ClCG03G008640 Citrullus lanatus HOM05D007209 ORTHO05D000921 7.5e-47 191.4 191 56.0
ClCG07G007780 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.3e-46 190.7 207 56.0
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.0e-44 183.3 124 77.4
MELO3C029808.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.7e-43 180.3 106 85.8
MELO3C031338.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.2e-43 179.9 124 75.0
MELO3C032288.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.9e-42 176.8 150 65.3
MELO3C033912.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.4e-42 174.5 195 54.4
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 8.0e-41 171.4 229 42.8
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.0e-37 158.3 228 41.2
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 7.0e-37 158.3 228 41.7
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.7e-35 153.7 195 48.2
Sed0011521 Sechium edule HOM05D007209 ORTHO05D000921 2.3e-35 153.3 227 39.6
MELO3C035462.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.5e-34 150.6 161 54.0
MELO3C029648.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.5e-34 149.8 110 70.9
MELO3C035128.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.5e-34 147.9 89 82.0
MELO3C032294.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.3e-32 143.3 85 87.1
Sed0016419 Sechium edule HOM05D007209 ORTHO05D000921 2.9e-30 136.3 123 63.4
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.1e-29 134.4 228 37.3
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.1e-29 134.4 228 37.3
MELO3C030181.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.1e-29 132.5 111 64.9
MELO3C032195.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.6e-28 129.0 89 75.3
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 4.6e-28 129.0 256 35.2
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 1.1e-26 124.4 225 36.4
MELO3C032620.2 Cucumis melo HOM05D007209 ORTHO05D000285 3.3e-26 122.9 173 45.1
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 1.3e-22 110.9 223 35.0
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.1e-21 107.8 219 32.9
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 3.2e-21 106.3 219 32.9
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 4.1e-21 105.9 219 32.0
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 5.4e-21 105.5 222 34.2
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 9.2e-21 104.8 232 33.6
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 2.0e-20 103.6 220 29.5
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 3.5e-20 102.8 263 31.9
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 6.0e-20 102.1 176 35.8
ClCG09G017120 Citrullus lanatus HOM05D007209 ORTHO05D000921 7.8e-20 101.7 58 82.8
Rhsim01G0206000 Rhododendron simsii HOM05D007209 ORTHO05D000921 5.0e-19 99.0 175 36.0
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 3.3e-18 96.3 223 32.7
MELO3C031356.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.5e-18 94.7 66 72.7
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 2.8e-17 93.2 244 28.7
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.2e-17 92.0 239 31.4
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.4e-16 90.9 237 32.1
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 4.0e-16 89.4 201 32.8
Sed0024451 Sechium edule HOM05D007209 ORTHO05D000921 8.9e-16 88.2 173 37.0
MELO3C031404.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.4e-15 85.9 47 85.1
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 9.8e-15 84.7 166 32.5
Dinv11546 Davidia involucrata HOM05D007209 ORTHO05D000921 1.3e-14 84.3 130 37.7
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 2.2e-14 83.6 166 32.5
TWI09G1246 Tripterygium wilfordii HOM05D000665 ORTHO05D000921 3.7e-14 82.8 174 32.8
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 6.4e-14 82.0 183 30.6
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 1.1e-13 81.3 222 28.4
COL.COLO4_05628 Corchorus olitorius HOM05D007209 ORTHO05D000921 2.4e-13 80.1 200 30.0
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 2.4e-13 80.1 192 31.2
CANSAT21G1611 Cannabis sativa HOM05D007209 ORTHO05D000921 1.2e-12 77.8 145 37.9
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 1.6e-12 77.4 196 28.1
Lj1g0024899 Lotus japonicus HOM05D000665 ORTHO05D000921 4.6e-12 75.9 149 35.6
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 7.8e-12 75.1 156 32.1
Dinv07014 Davidia involucrata HOM05D000665 ORTHO05D000921 2.3e-11 73.6 154 28.6
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 3.9e-11 72.8 120 35.0
CSS0046487 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.6e-11 72.0 152 34.9
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 8.6e-11 71.6 83 45.8
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 8.6e-11 71.6 130 36.2
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.1e-10 71.2 189 30.2
Actinidia03524 Actinidia chinensis HOM05D013777 ORTHO05D000921 4.3e-10 69.3 117 32.5
Actinidia24178 Actinidia chinensis HOM05D013777 ORTHO05D000921 4.3e-10 69.3 130 34.6
Dinv44163 Davidia involucrata HOM05D007209 ORTHO05D000921 7.3e-10 68.6 75 46.7
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 7.3e-10 68.6 164 26.8
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 7.3e-10 68.6 164 26.8
EL10Ac6g14409 Beta vulgaris HOM05D007209 ORTHO05D000921 9.5e-10 68.2 185 29.2
COL.COLO4_33426 Corchorus olitorius HOM05D007209 ORTHO05D000921 9.5e-10 68.2 128 34.4
Sed0007988 Sechium edule HOM05D007209 ORTHO05D000921 9.5e-10 68.2 177 30.5
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.2e-09 67.8 160 31.9
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.6e-09 67.4 173 30.1
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 1.6e-09 67.4 193 28.0
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.1e-09 67.0 173 30.1
Actinidia05403 Actinidia chinensis HOM05D013777 ORTHO05D000921 2.8e-09 66.6 122 36.1
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 2.8e-09 66.6 187 26.7
COL.COLO4_24640 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.6e-09 66.2 116 41.4
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 6.2e-09 65.5 146 32.2
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 6.2e-09 65.5 146 32.2
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 6.2e-09 65.5 146 32.2
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 6.2e-09 65.5 135 30.4
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.4e-08 64.3 173 28.9
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 1.4e-08 64.3 87 43.7
MELO3C032265.2 Cucumis melo HOM05D003346 ORTHO05D000921 1.4e-08 64.3 36 77.8
CSS0028686 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.8e-08 63.9 173 28.9
Dinv27628 Davidia involucrata HOM05D007209 ORTHO05D000921 1.8e-08 63.9 117 34.2
Hund13763 Selenicereus undatus HOM05D000665 ORTHO05D000921 1.8e-08 63.9 214 25.7
CSS0037006 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.1e-08 63.2 132 31.8
CANSAT01G1814 Cannabis sativa HOM05D007209 ORTHO05D000921 3.1e-08 63.2 220 26.4
AUR62042144 Chenopodium quinoa HOM05D007209 ORTHO05D000921 4.0e-08 62.8 86 40.7
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 4.0e-08 62.8 100 37.0
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-07 61.2 86 37.2
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 1.2e-07 61.2 179 27.9
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.2e-07 61.2 180 31.1
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.5e-07 60.8 178 27.5
Dinv23342 Davidia involucrata HOM05D012675 ORTHO05D181573 1.5e-07 60.8 51 51.0
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 1.5e-07 60.8 128 32.0
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 2.0e-07 60.5 171 28.7
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 2.0e-07 60.5 61 52.5
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 2.6e-07 60.1 164 25.6
Eucgr.E03640 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.4e-07 59.7 142 29.6
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 3.4e-07 59.7 146 28.1
CANSAT21G0095 Cannabis sativa HOM05D007209 ORTHO05D000921 5.8e-07 58.9 110 34.5
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 5.8e-07 58.9 146 27.4
Aa31LG3G4690 Aethionema arabicum HOM05D000876 ORTHO05D000285 7.6e-07 58.5 211 27.0
Rhsim12G0122900 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.6e-07 58.5 139 35.3
ClCG09G017130 Citrullus lanatus HOM05D007209 ORTHO05D000921 9.9e-07 58.2 126 36.5
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 9.9e-07 58.2 62 50.0
Rhsim03G0129100 Rhododendron simsii HOM05D007209 ORTHO05D000921 9.9e-07 58.2 91 40.7
CSS0029683 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.3e-06 57.8 178 27.0
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.3e-06 57.8 165 29.1
AUR62012087 Chenopodium quinoa HOM05D000665 ORTHO05D000921 1.7e-06 57.4 159 29.6
AUR62039377 Chenopodium quinoa HOM05D000665 ORTHO05D000921 1.7e-06 57.4 159 29.6
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.7e-06 57.4 176 28.4
Lj2g0008174 Lotus japonicus HOM05D000876 ORTHO05D000285 1.7e-06 57.4 124 30.6
Rhsim05G0204000 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.7e-06 57.4 121 33.1
Rhsim12G0033100 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.7e-06 57.4 121 33.1
RhsimUnG0122200 Rhododendron simsii HOM05D000153 ORTHO05D000921 1.7e-06 57.4 121 33.1
CSS0047450 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.2e-06 57.0 164 28.0
ClCG10G005970 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.2e-06 57.0 37 70.3
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 2.2e-06 57.0 137 29.9
EL10Ac2g04750 Beta vulgaris HOM05D000665 ORTHO05D000921 2.9e-06 56.6 134 28.4
Carub.0003s1061 Capsella rubella HOM05D000876 ORTHO05D000285 2.9e-06 56.6 124 29.0
AL3G22820 Arabidopsis lyrata HOM05D000876 ORTHO05D000285 4.9e-06 55.8 124 28.2
Dinv31500 Davidia involucrata HOM05D007209 ORTHO05D000921 4.9e-06 55.8 61 49.2
Rhsim11G0031900 Rhododendron simsii HOM05D007209 ORTHO05D000921 4.9e-06 55.8 54 46.3
SGA_v2.0_scaffold74G24728 Striga asiatica HOM05D011217 ORTHO05D013910 4.9e-06 55.8 161 28.0
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 4.9e-06 55.8 129 24.0
CANSAT11G2265 Cannabis sativa HOM05D007209 ORTHO05D000921 8.4e-06 55.1 54 50.0
AUR62002905 Chenopodium quinoa HOM05D007209 ORTHO05D000921 8.4e-06 55.1 103 37.9
THA.LOC104823140 Tarenaya hassleriana HOM05D000876 ORTHO05D000285 8.4e-06 55.1 149 27.5
TAR625G0890 Trochodendron aralioides HOM05D015137 ORTHO05D000921 8.4e-06 55.1 105 31.4


User provided reference genes

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