Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034911.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.2e-90 333.6 153 100.0
MELO3C030140.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.9e-47 192.2 145 64.8
MELO3C032631.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.4e-44 183.3 123 74.0
MELO3C034500.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-44 182.6 130 70.0
MELO3C035035.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.3e-42 174.5 163 57.7
MELO3C034970.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.7e-40 169.1 149 59.1
MELO3C027996.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.5e-40 168.7 168 54.2
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.5e-40 168.7 216 45.8
MELO3C029153.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.5e-40 168.7 168 54.8
MELO3C035129.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.9e-39 165.6 114 72.8
MELO3C034519.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.6e-37 159.8 212 44.8
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 6.2e-29 131.3 136 46.3
MELO3C029607.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.2e-29 131.3 72 81.9
MELO3C030915.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-28 129.4 166 44.6
MELO3C027432.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.0e-28 128.6 157 48.4
MELO3C029129.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.5e-27 126.7 177 42.4
MELO3C027818.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.2e-26 122.9 76 75.0
MELO3C029201.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.7e-26 122.1 100 62.0
MELO3C030224.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.9e-26 121.7 76 75.0
MELO3C034440.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.9e-25 119.8 102 58.8
MELO3C028238.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.5e-22 110.2 71 73.2
ClCG11G007640 Citrullus lanatus HOM05D007110 ORTHO05D000592 9.8e-19 97.4 113 46.9
MELO3C021501.2 Cucumis melo HOM05D000502 ORTHO05D000356 2.2e-18 96.3 50 82.0
MELO3C028199.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.4e-18 94.7 50 80.0
MELO3C034441.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-17 94.0 52 78.8
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.4e-17 91.7 206 27.2
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.2e-16 90.5 206 26.7
MELO3C029127.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.6e-16 90.1 89 52.8
MELO3C033343.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.1e-16 89.7 46 80.4
MELO3C035372.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.1e-15 85.1 75 58.7
MELO3C035597.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-14 84.0 102 46.1
MELO3C000067.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.6e-14 81.6 38 97.4
MELO3C028541.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.5e-14 80.9 74 58.1
MELO3C032765.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.8e-13 79.3 38 94.7
MELO3C028426.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.1e-13 77.8 72 56.9
MELO3C027681.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.8e-12 76.6 59 62.7
MELO3C031851.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.8e-12 76.6 40 90.0
MELO3C029126.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-12 76.3 37 91.9
MELO3C032064.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-12 76.3 59 64.4
MELO3C034491.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-12 76.3 52 71.2
MELO3C035417.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.1e-12 75.9 52 69.2
MELO3C033304.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.0e-12 75.5 51 70.6
MELO3C031430.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.2e-11 73.9 54 63.0
MELO3C029881.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.6e-11 72.8 67 56.7
MELO3C034551.2 Cucumis melo HOM05D007110 ORTHO05D000233 7.6e-11 71.2 52 65.4
MELO3C029556.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.9e-11 70.9 40 87.5
MELO3C032093.2 Cucumis melo HOM05D000539 ORTHO05D000592 9.2e-09 64.3 113 30.1
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 1.6e-08 63.5 129 39.5
Ca_07064_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.5e-08 62.4 118 24.6
MELO3C029690.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.5e-08 62.4 87 32.2
Atru.chr6.155 Acer truncatum HOM05D000539 ORTHO05D000592 1.0e-07 60.8 64 46.9
CsaV3_1G045370 Cucumis sativus L. HOM05D000539 ORTHO05D000592 1.7e-07 60.1 100 29.0
ClCG05G015020 Citrullus lanatus HOM05D007110 ORTHO05D000592 3.0e-07 59.3 78 41.0
Ca_20176_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-07 58.9 88 28.4
CsaV3_6G018870 Cucumis sativus L. HOM05D000539 ORTHO05D000592 5.1e-07 58.5 100 28.0
MD01G1047900 Malus domestica HOM05D000539 ORTHO05D000592 6.6e-07 58.2 75 38.7
Prupe.6G160400 Prunus persica HOM05D000539 ORTHO05D000592 6.6e-07 58.2 109 28.4
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 6.6e-07 58.2 65 41.5
Sed0000174 Sechium edule HOM05D000539 ORTHO05D000592 6.6e-07 58.2 58 41.4
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-07 57.8 65 41.5
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-07 57.8 65 41.5
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 1.1e-06 57.4 65 41.5
Sed0004440 Sechium edule HOM05D000539 ORTHO05D000592 1.1e-06 57.4 58 41.4
Sed0011271 Sechium edule HOM05D000539 ORTHO05D000592 1.1e-06 57.4 58 41.4
Sed0014995 Sechium edule HOM05D000539 ORTHO05D000592 1.1e-06 57.4 58 41.4
Sed0019579 Sechium edule HOM05D000539 ORTHO05D000592 1.1e-06 57.4 58 41.4
Ca_04527_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.9e-06 56.6 118 22.9
MELO3C027777.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.9e-06 56.6 59 52.5
Sed0007296 Sechium edule HOM05D000539 ORTHO05D000592 1.9e-06 56.6 75 33.3
CANSAT35G0077 Cannabis sativa HOM05D000539 ORTHO05D000592 2.5e-06 56.2 74 33.8
CANSAT64G2767 Cannabis sativa HOM05D000539 ORTHO05D000592 2.5e-06 56.2 74 33.8
Lj2g0024513 Lotus japonicus HOM05D052308 ORTHO05D015702 3.3e-06 55.8 75 36.0
FAN19G0444 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.6e-06 55.1 113 27.4
PSO170G4584 Papaver somniferum HOM05D000539 ORTHO05D000233 7.3e-06 54.7 64 39.1
PSO455G0142 Papaver somniferum HOM05D000539 ORTHO05D000233 7.3e-06 54.7 64 39.1


User provided reference genes

Program Settings