Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034869.2 Cucumis melo HOM05D000507 ORTHO05D166760 4.7e-31 137.1 64 100.0
MELO3C030386.2 Cucumis melo HOM05D000507 ORTHO05D168167 1.3e-25 119.0 63 87.3
MELO3C028859.2 Cucumis melo HOM05D000507 ORTHO05D169823 9.5e-24 112.8 63 82.5
MELO3C031720.2 Cucumis melo HOM05D000507 ORTHO05D168480 2.3e-22 108.2 63 79.4
MELO3C019607.2 Cucumis melo HOM05D000507 ORTHO05D166834 5.2e-22 107.1 63 77.8
MELO3C034676.2 Cucumis melo HOM05D000507 ORTHO05D171602 4.9e-20 100.5 63 74.6
MELO3C012552.2 Cucumis melo HOM05D000507 ORTHO05D168172 2.4e-19 98.2 58 79.3
MELO3C034700.2 Cucumis melo HOM05D000507 ORTHO05D168609 1.2e-15 85.9 53 79.2
MELO3C012364.2 Cucumis melo HOM05D000507 ORTHO05D000416 1.6e-15 85.5 53 73.6
MELO3C024852.2 Cucumis melo HOM05D000507 ORTHO05D034925 1.8e-14 82.0 53 73.6
CsaV3_5G035630 Cucumis sativus L. HOM05D000507 ORTHO05D000416 4.0e-14 80.9 54 74.1
ClCG05G021600 Citrullus lanatus HOM05D000507 ORTHO05D000416 1.2e-13 79.3 53 71.7
MELO3C032391.2 Cucumis melo HOM05D000507 ORTHO05D166737 1.3e-12 75.9 45 80.0
MELO3C030658.2 Cucumis melo HOM05D000507 ORTHO05D169221 1.7e-12 75.5 46 78.3
MELO3C032414.2 Cucumis melo HOM05D000507 ORTHO05D166779 3.7e-12 74.3 51 70.6
MELO3C023356.2 Cucumis melo HOM05D000507 ORTHO05D169504 6.0e-10 67.0 43 74.4
CiPaw.13G036500 Carya illinoinensis HOM05D000507 ORTHO05D000416 1.5e-08 62.4 53 58.5
Haze_02600 Corylus avellana HOM05D000507 ORTHO05D000416 1.9e-08 62.0 53 58.5
ClCG08G008110 Citrullus lanatus HOM05D000507 ORTHO05D000416 3.3e-08 61.2 53 56.6
MELO3C033675.2 Cucumis melo HOM05D000507 ORTHO05D166369 7.3e-08 60.1 36 77.8
Cfa011228 Carpinus fangiana HOM05D000507 ORTHO05D000416 9.5e-08 59.7 53 56.6
Sed0001507 Sechium edule HOM05D000507 ORTHO05D000416 1.2e-07 59.3 53 54.7
VMungo0720G2560 Vigna mungo HOM05D000507 ORTHO05D000416 1.2e-07 59.3 53 54.7
Phvul.007G104800 Phaseolus vulgaris HOM05D000507 ORTHO05D000416 1.6e-07 58.9 53 54.7
MELO3C019884.2 Cucumis melo HOM05D000507 ORTHO05D000416 2.1e-07 58.5 53 52.8
CsaV3_6G004090 Cucumis sativus L. HOM05D000507 ORTHO05D000416 2.1e-07 58.5 53 54.7
Manes.07G091600 Manihot esculenta HOM05D000507 ORTHO05D000416 2.1e-07 58.5 53 54.7
Lalb_Chr02g0151391 Lupinus albus HOM05D000507 ORTHO05D000416 3.6e-07 57.8 53 50.9
AL6G14260 Arabidopsis lyrata HOM05D000507 ORTHO05D000416 6.2e-07 57.0 53 49.1
Carub.0006s0355 Capsella rubella HOM05D000507 ORTHO05D000416 6.2e-07 57.0 53 49.1
Eucgr.J01011 Eucalyptus grandis HOM05D000507 ORTHO05D000416 6.2e-07 57.0 53 52.8
Sabra08G0017200 Salix brachista HOM05D000507 ORTHO05D000416 6.2e-07 57.0 53 52.8
Sed0001855 Sechium edule HOM05D000507 ORTHO05D000416 6.2e-07 57.0 53 52.8
AL6G14280 Arabidopsis lyrata HOM05D000507 ORTHO05D000416 8.1e-07 56.6 53 50.9
AT5G04630 Arabidopsis thaliana HOM05D000507 ORTHO05D000416 8.1e-07 56.6 53 49.1
AT5G04660 Arabidopsis thaliana HOM05D000507 ORTHO05D000416 8.1e-07 56.6 53 50.9
BcaC05g29448 Brassica carinata HOM05D000507 ORTHO05D000416 8.1e-07 56.6 53 50.9
C05p57480 Brassica napus HOM05D000507 ORTHO05D000416 8.1e-07 56.6 53 50.9
Thhalv10020529m.g Eutrema salsugineum HOM05D000507 ORTHO05D000416 8.1e-07 56.6 53 50.9
Sabra08G0017100 Salix brachista HOM05D000507 ORTHO05D000416 8.1e-07 56.6 53 50.9
Sp3g08860 Schrenkiella parvula HOM05D000507 ORTHO05D000416 8.1e-07 56.6 53 50.9
TAR284G0003 Trochodendron aralioides HOM05D000507 ORTHO05D000416 1.1e-06 56.2 53 50.9
TAR369G0104 Trochodendron aralioides HOM05D000507 ORTHO05D000416 1.1e-06 56.2 53 50.9
BolC5t34405H Brassica oleracea HOM05D000507 ORTHO05D000416 1.4e-06 55.8 53 50.9
MD02G1247800 Malus domestica HOM05D000507 ORTHO05D000416 1.4e-06 55.8 53 49.1
unitig_46.g18616 Utricularia gibba HOM05D000507 ORTHO05D000416 1.4e-06 55.8 53 49.1
Aa31LG3G3430 Aethionema arabicum HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 49.1
BcaB01g05908 Brassica carinata HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 47.2
BcaNung06523 Brassica carinata HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 49.1
A03p01730 Brassica napus HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 47.2
A05p38590 Brassica napus HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 49.1
C03p02140 Brassica napus HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 47.2
BraA03t09548Z Brassica rapa HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 47.2
CANSAT56G3984 Cannabis sativa HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 50.9
Thhalv10016078m.g Eutrema salsugineum HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 49.1
FAN01G0159 Fragaria x ananassa HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 47.2
FAN03G1756 Fragaria x ananassa HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 47.2
Glyma.10G202400 Glycine max HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 49.1
Glyma.20G188000 Glycine max HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 49.1
RcHm_v2.0_Chr1g0333181 Rosa chinensis HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 49.1
Sp6g38150 Schrenkiella parvula HOM05D000507 ORTHO05D000416 1.8e-06 55.5 53 52.8
TWI38G1909 Tripterygium wilfordii HOM05D000507 ORTHO05D000416 1.8e-06 55.5 52 53.8
arahy.Tifrunner.gnm1.ann1.CNM5E0 Arachis hypogaea HOM05D000507 ORTHO05D000416 2.3e-06 55.1 53 49.1
arahy.Tifrunner.gnm1.ann1.E3VCX4 Arachis hypogaea HOM05D000507 ORTHO05D000416 2.3e-06 55.1 53 49.1
BraA05t22650Z Brassica rapa HOM05D000507 ORTHO05D000416 2.3e-06 55.1 53 49.1
CARHR208640 Cardamine hirsuta HOM05D000507 ORTHO05D000416 2.3e-06 55.1 53 47.2
Ciclev10031286m.g Citrus clementina HOM05D000507 ORTHO05D000416 2.3e-06 55.1 53 50.9
Lj3A931T45 Lonicera japonica HOM05D000507 ORTHO05D000416 2.3e-06 55.1 53 49.1
BcaNung05853 Brassica carinata HOM05D000507 ORTHO05D000416 3.1e-06 54.7 53 47.2
BolC3t12766H Brassica oleracea HOM05D000507 ORTHO05D000416 3.1e-06 54.7 53 47.2
FvH4_7g05960 Fragaria vesca HOM05D000507 ORTHO05D000416 3.1e-06 54.7 53 45.3
FAN06G3035 Fragaria x ananassa HOM05D000507 ORTHO05D000416 3.1e-06 54.7 53 45.3
Gohir.D10G204800 Gossypium hirsutum HOM05D000507 ORTHO05D000416 3.1e-06 54.7 53 45.3
Gorai.011G229800 Gossypium raimondii HOM05D000507 ORTHO05D000416 3.1e-06 54.7 53 45.3
Prupe.2G086300 Prunus persica HOM05D000507 ORTHO05D000416 3.1e-06 54.7 53 50.9
PGR044G1824 Punica granatum HOM05D000507 ORTHO05D000416 3.1e-06 54.7 53 50.9
Lalb_Chr03g0036361 Lupinus albus HOM05D000507 ORTHO05D000416 4.0e-06 54.3 53 45.3
PSO339G3437 Papaver somniferum HOM05D000507 ORTHO05D000416 4.0e-06 54.3 53 47.2
PSO384G1763 Papaver somniferum HOM05D000507 ORTHO05D000416 4.0e-06 54.3 53 47.2
Atru.chr12.972 Acer truncatum HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 47.2
Aa31LG11G5490 Aethionema arabicum HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 47.2
Cpa.g.sc128.44 Carica papaya HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 45.3
Gohir.D12G091200 Gossypium hirsutum HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 45.3
Gorai.008G098700 Gossypium raimondii HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 45.3
MD07G1068700 Malus domestica HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 49.1
Nn6g35029 Nelumbo nucifera HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 49.1
Potri.008G025500 Populus trichocarpa HOM05D000507 ORTHO05D000416 5.2e-06 53.9 43 55.8
Thecc.10G110500 Theobroma cacao HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 47.2
TAR623G1483 Trochodendron aralioides HOM05D000507 ORTHO05D000416 5.2e-06 53.9 53 49.1
BcaC06g32174 Brassica carinata HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
BcaC06g32176 Brassica carinata HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
A10p31470 Brassica napus HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
C09p72160 Brassica napus HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
BolC9t59960H Brassica oleracea HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
BraA10t45193Z Brassica rapa HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
COL.COLO4_33904 Corchorus olitorius HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
Gohir.A10G197700 Gossypium hirsutum HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 45.3
Lj5g0025187 Lotus japonicus HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
PSO384G0207 Papaver somniferum HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 47.2
QL04p041297 Quercus lobata HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 50.9
QL04p041340 Quercus lobata HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 50.9
GSVIVG01034704001 Vitis vinifera HOM05D000507 ORTHO05D000416 6.8e-06 53.5 53 49.1
Carub.0003s0980 Capsella rubella HOM05D000507 ORTHO05D000416 8.9e-06 53.1 53 49.1
Carub.0006s0356 Capsella rubella HOM05D000507 ORTHO05D000416 8.9e-06 53.1 53 49.1
Nitab4.5_0000096g0120 Nicotiana tabacum HOM05D000507 ORTHO05D000416 8.9e-06 53.1 53 47.2


User provided reference genes

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