Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034852.2 Cucumis melo HOM05D003525 ORTHO05D167553 2.9e-20 100.9 50 100.0
MELO3C020978.2 Cucumis melo HOM05D003525 ORTHO05D004578 1.8e-17 91.7 49 89.8
CsaV3_2G014670 Cucumis sativus L. HOM05D003525 ORTHO05D004578 1.8e-17 91.7 49 89.8
ClCG11G004450 Citrullus lanatus HOM05D003525 ORTHO05D004578 2.8e-15 84.3 49 83.7
Sed0019550 Sechium edule HOM05D003525 ORTHO05D004578 6.3e-15 83.2 49 81.6
Sed0023087 Sechium edule HOM05D003525 ORTHO05D004578 1.8e-14 81.6 49 79.6
PGR142G1190 Punica granatum HOM05D003525 ORTHO05D004578 4.5e-13 77.0 49 73.5
RcHm_v2.0_Chr6g0264151 Rosa chinensis HOM05D003525 ORTHO05D004578 1.3e-12 75.5 49 69.4
FvH4_2g08710 Fragaria vesca HOM05D003525 ORTHO05D004578 1.7e-12 75.1 49 69.4
FAN24G2203 Fragaria x ananassa HOM05D003525 ORTHO05D004578 1.7e-12 75.1 49 69.4
FAN27G1229 Fragaria x ananassa HOM05D003525 ORTHO05D004578 1.7e-12 75.1 49 69.4
Prupe.8G097900 Prunus persica HOM05D003525 ORTHO05D004578 1.7e-12 75.1 49 71.4
CANSAT01G0222 Cannabis sativa HOM05D003525 ORTHO05D004578 2.9e-12 74.3 49 69.4
MD05G1067200 Malus domestica HOM05D003525 ORTHO05D004578 2.9e-12 74.3 49 67.3
FAN20G1110 Fragaria x ananassa HOM05D003525 ORTHO05D004578 3.8e-12 73.9 49 67.3
Potri.004G153900 Populus trichocarpa HOM05D003525 ORTHO05D004578 3.8e-12 73.9 49 69.4
Haze_02380 Corylus avellana HOM05D003525 ORTHO05D004578 5.0e-12 73.6 48 70.8
Cfa005008 Carpinus fangiana HOM05D003525 ORTHO05D004578 6.5e-12 73.2 47 70.2
Sabra04G0102300 Salix brachista HOM05D003525 ORTHO05D004578 6.5e-12 73.2 49 67.3
GSVIVG01031961001 Vitis vinifera HOM05D003525 ORTHO05D004578 6.5e-12 73.2 49 67.3
Atru.chr5.3008 Acer truncatum HOM05D003525 ORTHO05D004578 8.5e-12 72.8 49 67.3
vmacro17495 Vaccinium macrocarpon HOM05D003525 ORTHO05D004578 8.5e-12 72.8 48 70.8
CiPaw.05G064000 Carya illinoinensis HOM05D003525 ORTHO05D004578 1.1e-11 72.4 49 71.4
FAN15G1113 Fragaria x ananassa HOM05D003525 ORTHO05D004578 1.1e-11 72.4 49 67.3
Peaxi162Scf00003g01338 Petunia axillaris HOM05D003525 ORTHO05D004578 1.1e-11 72.4 49 65.3
Actinidia17817 Actinidia chinensis HOM05D003525 ORTHO05D004578 1.4e-11 72.0 42 78.6
CAN.G1.44 Capsicum annuum HOM05D003525 ORTHO05D004578 1.4e-11 72.0 49 65.3
Migut.B00240 Erythranthe guttata HOM05D003525 ORTHO05D004578 1.4e-11 72.0 49 67.3
Peaxi162Scf00016g00826 Petunia axillaris HOM05D003525 ORTHO05D004578 1.4e-11 72.0 49 67.3
TWI31G1364 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 1.4e-11 72.0 48 72.9
Dinv42068 Davidia involucrata HOM05D003525 ORTHO05D004578 1.9e-11 71.6 48 70.8
CSS0028225 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D004578 2.5e-11 71.2 49 69.4
Rhsim05G0074500 Rhododendron simsii HOM05D003525 ORTHO05D004578 2.5e-11 71.2 48 68.8
CSS0001193 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D004578 4.2e-11 70.5 49 65.3
Nn1g05019 Nelumbo nucifera HOM05D003525 ORTHO05D004578 4.2e-11 70.5 48 68.8
CiPaw.06G135700 Carya illinoinensis HOM05D003525 ORTHO05D004578 5.5e-11 70.1 48 68.8
Eucgr.I01265 Eucalyptus grandis HOM05D003525 ORTHO05D004578 5.5e-11 70.1 49 67.3
MD10G1076900 Malus domestica HOM05D003525 ORTHO05D004578 7.2e-11 69.7 49 67.3
TAR628G1296 Trochodendron aralioides HOM05D003525 ORTHO05D004578 7.2e-11 69.7 49 67.3
Actinidia00521 Actinidia chinensis HOM05D003525 ORTHO05D004578 9.4e-11 69.3 49 69.4
Aqoxy5G01649 Aquilegia oxysepala HOM05D003525 ORTHO05D004578 9.4e-11 69.3 49 69.4
MBI19_g07191_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 9.4e-11 69.3 49 65.3
Nn5g29579 Nelumbo nucifera HOM05D003525 ORTHO05D004578 9.4e-11 69.3 49 67.3
Nitab4.5_0005152g0050 Nicotiana tabacum HOM05D003525 ORTHO05D004578 9.4e-11 69.3 49 63.3
SGA_v2.0_scaffold58G20536 Striga asiatica HOM05D003525 ORTHO05D004578 1.6e-10 68.6 49 67.3
TWI79G1197 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 1.6e-10 68.6 48 68.8
DCAR_022933 Daucus carota HOM05D003525 ORTHO05D004578 2.1e-10 68.2 48 64.6
Potri.009G115500 Populus trichocarpa HOM05D003525 ORTHO05D004578 2.1e-10 68.2 49 65.3
PGSC0003DMG400000723 Solanum tuberosum HOM05D003525 ORTHO05D004578 2.1e-10 68.2 49 63.3
Nitab4.5_0000308g0040 Nicotiana tabacum HOM05D003525 ORTHO05D004578 2.7e-10 67.8 49 63.3
Sopen01g051770 Solanum pennellii HOM05D003525 ORTHO05D004578 2.7e-10 67.8 49 63.3
TAR376G0071 Trochodendron aralioides HOM05D003525 ORTHO05D004578 3.6e-10 67.4 49 63.3
QL11p043469 Quercus lobata HOM05D003525 ORTHO05D004578 4.7e-10 67.0 49 67.3
Solyc10g051340.2 Solanum lycopersicum HOM05D003525 ORTHO05D004578 4.7e-10 67.0 49 61.2
Sopen10g023030 Solanum pennellii HOM05D003525 ORTHO05D004578 4.7e-10 67.0 49 61.2
MSTRG.20085 Avicennia marina HOM05D003525 ORTHO05D004578 6.1e-10 66.6 49 65.3
Oeu020764.1 Olea europaea HOM05D003525 ORTHO05D004578 7.9e-10 66.2 49 63.3
Manes.15G163700 Manihot esculenta HOM05D003525 ORTHO05D004578 1.0e-09 65.9 49 63.3
Manes.17G100700 Manihot esculenta HOM05D003525 ORTHO05D004578 1.4e-09 65.5 49 63.3
Solyc01g109580.4 Solanum lycopersicum HOM05D003525 ORTHO05D004578 1.4e-09 65.5 42 69.0
CAN.G1412.2 Capsicum annuum HOM05D003525 ORTHO05D004578 1.8e-09 65.1 49 59.2
Migut.N01237 Erythranthe guttata HOM05D003525 ORTHO05D004578 1.8e-09 65.1 49 61.2
vmacro02112 Vaccinium macrocarpon HOM05D003525 ORTHO05D004578 1.8e-09 65.1 49 63.3
PGSC0003DMG400033911 Solanum tuberosum HOM05D003525 ORTHO05D004578 2.3e-09 64.7 49 59.2
TAR381G1436 Trochodendron aralioides HOM05D003525 ORTHO05D004578 2.3e-09 64.7 48 64.6
unitig_22.g5174 Utricularia gibba HOM05D003525 ORTHO05D004578 2.3e-09 64.7 48 62.5
HanXRQChr13g0410301 Helianthus annuus HOM05D003525 ORTHO05D004578 3.0e-09 64.3 49 67.3
PSO210G1867 Papaver somniferum HOM05D003525 ORTHO05D004578 3.0e-09 64.3 48 60.4
PSO731G0006 Papaver somniferum HOM05D003525 ORTHO05D004578 3.0e-09 64.3 48 60.4
CDE07G1879 Ceratophyllum demersum HOM05D003525 ORTHO05D004578 3.9e-09 63.9 42 71.4
Cc02_g17610 Coffea canephora HOM05D003525 ORTHO05D004578 3.9e-09 63.9 48 62.5
Nitab4.5_0004172g0090 Nicotiana tabacum HOM05D003525 ORTHO05D004578 6.7e-09 63.2 46 60.9
Ciclev10028340m.g Citrus clementina HOM05D003525 ORTHO05D004578 8.8e-09 62.8 49 63.3
Oeu003718.1 Olea europaea HOM05D003525 ORTHO05D004578 1.1e-08 62.4 42 69.0
Nitab4.5_0001361g0240 Nicotiana tabacum HOM05D003525 ORTHO05D004578 2.6e-08 61.2 44 61.4
PSO541G1852 Papaver somniferum HOM05D003525 ORTHO05D004578 3.3e-08 60.8 49 61.2
Sabra09G0088700 Salix brachista HOM05D003525 ORTHO05D004578 3.3e-08 60.8 49 59.2
SalBow6G0296 Salvia bowleyana HOM05D003525 ORTHO05D004578 3.3e-08 60.8 44 65.9
SalBow6G6569 Salvia bowleyana HOM05D003525 ORTHO05D004578 3.3e-08 60.8 44 65.9
HanXRQChr16g0505731 Helianthus annuus HOM05D003525 ORTHO05D004578 4.4e-08 60.5 49 61.2
Sed0027089 Sechium edule HOM05D003525 ORTHO05D004578 4.4e-08 60.5 41 68.3
Actinidia27898 Actinidia chinensis HOM05D003525 ORTHO05D004578 5.7e-08 60.1 40 72.5
ClCG02G005050 Citrullus lanatus HOM05D003525 ORTHO05D004578 5.7e-08 60.1 41 65.9
MELO3C012526.2 Cucumis melo HOM05D003525 ORTHO05D004578 5.7e-08 60.1 41 68.3
CsaV3_7G023520 Cucumis sativus L. HOM05D003525 ORTHO05D004578 5.7e-08 60.1 41 68.3
ECA236G3498 Erigeron canadensis HOM05D003525 ORTHO05D004578 5.7e-08 60.1 42 71.4
MBI16_g38644_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 5.7e-08 60.1 43 62.8
THA.LOC104819606 Tarenaya hassleriana HOM05D003525 ORTHO05D004578 5.7e-08 60.1 49 61.2
Os03g0722600 Oryza sativa ssp. japonica HOM05D003525 ORTHO05D004578 7.4e-08 59.7 49 59.2
ECA234G0118 Erigeron canadensis HOM05D003525 ORTHO05D004578 9.7e-08 59.3 42 69.0
HanXRQChr10g0307161 Helianthus annuus HOM05D003525 ORTHO05D004578 1.7e-07 58.5 49 59.2
PSO675G1462 Papaver somniferum HOM05D003525 ORTHO05D004578 1.7e-07 58.5 49 59.2
ATR0733G133 Amborella trichopoda HOM05D003525 ORTHO05D004578 2.2e-07 58.2 50 60.0
Lsat_1_v5_gn_5_118620 Lactuca sativa HOM05D003525 ORTHO05D004578 2.2e-07 58.2 48 60.4
Zm00001eb040800 Zea mays HOM05D003525 ORTHO05D004578 2.2e-07 58.2 49 53.1
Glyma.11G118300 Glycine max HOM05D003525 ORTHO05D004578 2.8e-07 57.8 48 58.3
Glyma.12G043700 Glycine max HOM05D003525 ORTHO05D004578 2.8e-07 57.8 48 58.3
Sc18g0004490 Simmondsia chinensis HOM05D003525 ORTHO05D004578 2.8e-07 57.8 42 59.5
Aa31LG2G16030 Aethionema arabicum HOM05D003525 ORTHO05D004578 3.7e-07 57.4 49 59.2
CARHR242770 Cardamine hirsuta HOM05D003525 ORTHO05D004578 3.7e-07 57.4 49 57.1
Oeu029126.1 Olea europaea HOM05D003525 ORTHO05D004578 3.7e-07 57.4 49 57.1
unitig_8.g3568 Utricularia gibba HOM05D003525 ORTHO05D004578 3.7e-07 57.4 43 58.1
A01p03970 Brassica napus HOM05D003525 ORTHO05D004578 4.8e-07 57.0 49 59.2
BraA01t00384Z Brassica rapa HOM05D003525 ORTHO05D004578 4.8e-07 57.0 49 59.2
Lj1g0027431 Lotus japonicus HOM05D003525 ORTHO05D004578 6.3e-07 56.6 42 64.3
Medtr4g069960 Medicago truncatula HOM05D003525 ORTHO05D004578 6.3e-07 56.6 42 66.7
Hund06230 Selenicereus undatus HOM05D003525 ORTHO05D004578 6.3e-07 56.6 49 57.1
Cpa.g.sc62.144 Carica papaya HOM05D003525 ORTHO05D004578 8.2e-07 56.2 49 61.2
Duzib132G0954 Durio zibethinus HOM05D003525 ORTHO05D004578 8.2e-07 56.2 48 60.4
SMO174G0095 Selaginella moellendorffii HOM05D003525 ORTHO05D004578 8.2e-07 56.2 42 61.9
Duzib052G0238 Durio zibethinus HOM05D003525 ORTHO05D004578 1.1e-06 55.8 48 60.4
HanXRQChr04g0127991 Helianthus annuus HOM05D003525 ORTHO05D004578 1.1e-06 55.8 42 66.7
BcaB03g11830 Brassica carinata HOM05D003525 ORTHO05D004578 1.4e-06 55.5 49 57.1
C01p04280 Brassica napus HOM05D003525 ORTHO05D004578 1.4e-06 55.5 49 57.1
Lj5A197T61 Lonicera japonica HOM05D003525 ORTHO05D004578 1.4e-06 55.5 42 66.7
Phvul.011G045700 Phaseolus vulgaris HOM05D003525 ORTHO05D004578 1.4e-06 55.5 48 58.3
Zm00001eb215890 Zea mays HOM05D003525 ORTHO05D004578 1.4e-06 55.5 49 59.2
BolC1t00417H Brassica oleracea HOM05D003525 ORTHO05D004578 1.8e-06 55.1 49 57.1
COL.COLO4_25923 Corchorus olitorius HOM05D003525 ORTHO05D004578 1.8e-06 55.1 49 61.2
HPP92_017152 Vanilla planifolia HOM05D003525 ORTHO05D004578 1.8e-06 55.1 42 59.5
Zm00001eb055650 Zea mays HOM05D003525 ORTHO05D004578 1.8e-06 55.1 40 65.0
Aqoxy6G01092 Aquilegia oxysepala HOM05D003525 ORTHO05D004578 2.4e-06 54.7 42 64.3
BcaC01g00903 Brassica carinata HOM05D003525 ORTHO05D004578 2.4e-06 54.7 48 58.3
A08p16780 Brassica napus HOM05D003525 ORTHO05D004578 2.4e-06 54.7 48 58.3
C03p85740 Brassica napus HOM05D003525 ORTHO05D004578 2.4e-06 54.7 48 58.3
BolC3t20862H Brassica oleracea HOM05D003525 ORTHO05D004578 2.4e-06 54.7 48 58.3
BraA08t33643Z Brassica rapa HOM05D003525 ORTHO05D004578 2.4e-06 54.7 48 58.3
THA.LOC104807320 Tarenaya hassleriana HOM05D003525 ORTHO05D004578 2.4e-06 54.7 48 58.3
VMungo1127G1959 Vigna mungo HOM05D003525 ORTHO05D004578 2.4e-06 54.7 48 56.2
AL7G16740 Arabidopsis lyrata HOM05D003525 ORTHO05D004578 3.1e-06 54.3 49 55.1
AT4G34490 Arabidopsis thaliana HOM05D003525 ORTHO05D004578 3.1e-06 54.3 49 55.1
Duzib248G1434 Durio zibethinus HOM05D003525 ORTHO05D004578 3.1e-06 54.3 42 66.7
Thhalv10025082m.g Eutrema salsugineum HOM05D003525 ORTHO05D004578 3.1e-06 54.3 49 55.1
Gohir.D13G033000 Gossypium hirsutum HOM05D003525 ORTHO05D004578 3.1e-06 54.3 49 55.1
Gorai.013G037400 Gossypium raimondii HOM05D003525 ORTHO05D004578 3.1e-06 54.3 49 55.1
AagrBONN_evm.TU.Sc2ySwM_344.2699 Anthoceros agrestis HOM05D003525 ORTHO05D004578 4.1e-06 53.9 37 64.9
arahy.Tifrunner.gnm1.ann1.92AS0N Arachis hypogaea HOM05D003525 ORTHO05D004578 4.1e-06 53.9 48 56.2
arahy.Tifrunner.gnm1.ann1.WSY56D Arachis hypogaea HOM05D003525 ORTHO05D004578 4.1e-06 53.9 48 56.2
BcaNung06262 Brassica carinata HOM05D003525 ORTHO05D004578 4.1e-06 53.9 49 55.1
Carub.0007s0581 Capsella rubella HOM05D003525 ORTHO05D004578 4.1e-06 53.9 49 55.1
Ca_20867_v3 Cicer arietinum L. HOM05D003525 ORTHO05D004578 4.1e-06 53.9 42 61.9
MCO10G181 Micromonas commoda HOM05D003525 ORTHO05D004578 4.1e-06 53.9 44 52.3
Gohir.A03G194200 Gossypium hirsutum HOM05D003525 ORTHO05D004578 5.3e-06 53.5 47 53.2
Gohir.A13G034600 Gossypium hirsutum HOM05D003525 ORTHO05D004578 5.3e-06 53.5 49 55.1
Gohir.D02G215300 Gossypium hirsutum HOM05D003525 ORTHO05D004578 5.3e-06 53.5 47 53.2
Lalb_Chr08g0246641 Lupinus albus HOM05D003525 ORTHO05D004578 5.3e-06 53.5 42 59.5
Mapoly0074s0004 Marchantia polymorpha HOM05D003525 ORTHO05D004578 5.3e-06 53.5 42 57.1
Sp7g32280 Schrenkiella parvula HOM05D003525 ORTHO05D004578 5.3e-06 53.5 49 55.1
AUR62016732 Chenopodium quinoa HOM05D003525 ORTHO05D004578 7.0e-06 53.1 42 59.5
Gorai.005G243200 Gossypium raimondii HOM05D003525 ORTHO05D004578 9.1e-06 52.8 47 53.2
Lalb_Chr23g0265401 Lupinus albus HOM05D003525 ORTHO05D004578 9.1e-06 52.8 42 59.5
Thecc.02G086000 Theobroma cacao HOM05D003525 ORTHO05D004578 9.1e-06 52.8 48 58.3


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