Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034509.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.8e-151 537.3 280 100.0
MELO3C031804.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.3e-89 332.0 354 57.6
CsaV3_2G017350 Cucumis sativus L. HOM05D001963 ORTHO05D001863 2.2e-69 266.5 222 64.9
MELO3C028799.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.8e-66 255.0 345 51.6
MELO3C032669.2 Cucumis melo HOM05D001963 ORTHO05D001863 7.0e-55 218.4 181 68.5
MELO3C033043.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.0e-50 202.6 282 51.4
MELO3C030419.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.5e-46 189.5 200 57.5
MELO3C034489.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.1e-27 125.2 206 44.7
ClCG03G006670 Citrullus lanatus HOM05D001963 ORTHO05D001863 1.1e-18 98.2 94 58.5
Sed0000006 Sechium edule HOM05D000791 ORTHO05D001863 3.1e-18 96.7 278 25.5
MELO3C030180.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.0e-17 94.0 160 32.5
MELO3C031334.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.6e-17 93.6 160 31.9
MELO3C034958.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.2e-16 90.5 160 31.9
MELO3C029715.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.1e-15 88.2 161 31.7
MELO3C034455.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.4e-15 87.8 160 31.2
MELO3C034470.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.4e-15 87.0 160 31.2
MELO3C033468.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.2e-15 86.3 154 33.8
MELO3C030170.2 Cucumis melo HOM05D001963 ORTHO05D001863 5.4e-15 85.9 160 30.6
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 7.1e-15 85.5 181 27.6
MELO3C029216.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.3e-15 85.1 183 29.0
MELO3C029233.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.3e-15 85.1 160 30.6
MELO3C028240.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.6e-14 82.8 156 30.8
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 6.0e-14 82.4 180 31.7
MELO3C033641.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.0e-13 81.6 148 31.8
MELO3C033917.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.0e-13 80.1 149 30.2
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.9e-13 79.7 192 27.6
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 8.7e-13 78.6 192 27.1
Prupe.5G199500 Prunus persica HOM05D008985 ORTHO05D000222 8.7e-13 78.6 134 35.8
MELO3C028551.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.5e-12 77.0 120 33.3
RcHm_v2.0_Chr4g0410891 Rosa chinensis HOM05D008705 ORTHO05D000669 2.5e-12 77.0 151 29.8
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 3.3e-12 76.6 172 29.1
MELO3C028156.2 Cucumis melo HOM05D001963 ORTHO05D001863 7.3e-12 75.5 131 33.6
CsaV3_6G034360 Cucumis sativus L. HOM05D001963 ORTHO05D001863 1.3e-11 74.7 62 58.1
PSO349G0003 Papaver somniferum HOM05D000791 ORTHO05D000669 2.1e-11 73.9 159 28.9
MELO3C028253.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.8e-11 73.6 119 33.6
PSO732G0435 Papaver somniferum HOM05D000791 ORTHO05D000669 3.6e-11 73.2 138 30.4
MELO3C027661.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.8e-11 72.8 119 31.1
MELO3C033430.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.8e-11 72.8 159 27.7
FAN17G1365 Fragaria x ananassa HOM05D008705 ORTHO05D000669 4.8e-11 72.8 181 27.1
PSO675G3471 Papaver somniferum HOM05D000791 ORTHO05D000669 4.8e-11 72.8 138 30.4
COL.COLO4_19832 Corchorus olitorius HOM05D015286 ORTHO05D000669 6.2e-11 72.4 203 25.6
MELO3C032745.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.2e-11 72.4 174 25.9
PSO724G0226 Papaver somniferum HOM05D000791 ORTHO05D000669 6.2e-11 72.4 159 28.3
MELO3C028216.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.1e-11 72.0 139 29.5
MELO3C034992.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.1e-11 72.0 182 25.8
PSO724G1017 Papaver somniferum HOM05D000791 ORTHO05D000669 8.1e-11 72.0 159 28.3
RcHm_v2.0_Chr4g0402051 Rosa chinensis HOM05D000791 ORTHO05D000669 1.1e-10 71.6 138 34.8
RcHm_v2.0_Chr6g0272461 Rosa chinensis HOM05D008705 ORTHO05D000669 1.1e-10 71.6 123 28.5
MELO3C027970.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.4e-10 71.2 160 28.8
MELO3C029679.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.4e-10 71.2 159 27.7
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.4e-10 71.2 151 28.5
MELO3C033301.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.1e-10 70.1 162 26.5
MELO3C032712.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.0e-10 69.7 119 31.1
PSO421G0478 Papaver somniferum HOM05D000791 ORTHO05D000669 4.0e-10 69.7 138 29.0
MELO3C029861.2 Cucumis melo HOM05D001963 ORTHO05D001863 5.3e-10 69.3 120 31.7
RcHm_v2.0_Chr2g0086631 Rosa chinensis HOM05D002291 ORTHO05D000222 6.9e-10 68.9 155 31.6
MELO3C035017.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.0e-10 68.6 162 28.4
FvH4_1g01701 Fragaria vesca HOM05D002291 ORTHO05D000222 9.0e-10 68.6 155 31.6
FAN19G1637 Fragaria x ananassa HOM05D002291 ORTHO05D000222 9.0e-10 68.6 155 31.6
FAN28G2311 Fragaria x ananassa HOM05D002291 ORTHO05D000222 9.0e-10 68.6 155 31.6
MELO3C033814.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.5e-09 67.8 159 27.0
MELO3C032226.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.6e-09 67.0 143 28.7
MELO3C035493.2 Cucumis melo HOM05D001963 ORTHO05D001863 7.6e-09 65.5 173 25.4
MELO3C032003.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.3e-08 64.7 149 28.2
MELO3C033515.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.7e-08 64.3 152 28.9
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.2e-08 63.9 166 26.5
MELO3C032183.2 Cucumis melo HOM05D028489 ORTHO05D165921 2.9e-08 63.5 45 71.1
Os12g0231700 Oryza sativa ssp. japonica HOM05D000791 ORTHO05D000669 2.9e-08 63.5 194 28.4
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 2.9e-08 63.5 164 28.7
MELO3C027560.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.8e-08 63.2 141 27.0
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 8.4e-08 62.0 201 25.4
MELO3C033357.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.1e-07 61.6 42 71.4
MELO3C032245.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.4e-07 61.2 158 25.3
MELO3C034837.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.4e-07 61.2 95 33.7
MELO3C028235.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.9e-07 60.8 159 27.0
MELO3C030925.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.9e-07 60.8 159 24.5
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 1.9e-07 60.8 206 28.6
PSO210G2850 Papaver somniferum HOM05D000791 ORTHO05D000669 1.9e-07 60.8 165 24.2
MELO3C031127.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.4e-07 60.5 148 31.1
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 4.2e-07 59.7 167 28.1
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.2e-07 59.7 152 28.9
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.2e-07 59.7 152 28.3
MELO3C030815.2 Cucumis melo HOM05D001963 ORTHO05D001863 5.4e-07 59.3 159 25.2
MELO3C033734.2 Cucumis melo HOM05D001963 ORTHO05D001863 7.1e-07 58.9 125 27.2
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.1e-07 58.9 152 28.3
MELO3C027728.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.3e-07 58.5 137 29.2
MELO3C030283.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.3e-07 58.5 122 31.1
MELO3C030972.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.2e-06 58.2 156 26.3
MELO3C035485.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.2e-06 58.2 171 25.7
RcHm_v2.0_Chr5g0029021 Rosa chinensis HOM05D008485 ORTHO05D009647 1.2e-06 58.2 142 29.6
RcHm_v2.0_Chr1g0381361 Rosa chinensis HOM05D016653 ORTHO05D009647 1.6e-06 57.8 226 26.1
CANSAT80G1283 Cannabis sativa HOM05D013174 ORTHO05D015289 2.1e-06 57.4 144 30.6
MELO3C028826.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.1e-06 57.4 159 25.2
RcHm_v2.0_Chr5g0070861 Rosa chinensis HOM05D008485 ORTHO05D009647 2.1e-06 57.4 163 28.8
MELO3C032181.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.7e-06 57.0 156 26.3
Aqoxy4G01021 Aquilegia oxysepala HOM05D000791 ORTHO05D000669 3.5e-06 56.6 152 27.0
MELO3C035560.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.0e-06 55.8 83 33.7
Ciclev10013495m.g Citrus clementina HOM05D024304 ORTHO05D025109 7.9e-06 55.5 79 40.5


User provided reference genes

Program Settings