Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034232.2 Cucumis melo HOM05D011461 ORTHO05D003213 2.9e-63 245.0 116 100.0
MELO3C034165.2 Cucumis melo HOM05D011461 ORTHO05D003213 5.3e-25 117.9 70 80.0
MELO3C035254.2 Cucumis melo HOM05D011461 ORTHO05D003213 5.9e-24 114.4 70 77.1
MELO3C029442.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.1e-22 110.2 70 72.9
MELO3C032443.2 Cucumis melo HOM05D011461 ORTHO05D003213 3.2e-22 108.6 70 74.3
MELO3C029378.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.8e-20 102.8 70 67.1
MELO3C010327.2 Cucumis melo HOM05D000107 ORTHO05D000062 1.5e-19 99.8 100 51.0
MELO3C028675.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.5e-19 99.8 64 71.9
MELO3C030406.2 Cucumis melo HOM05D011461 ORTHO05D003213 4.1e-17 91.7 70 64.3
MELO3C033077.2 Cucumis melo HOM05D011461 ORTHO05D003213 5.9e-16 87.8 53 71.7
MELO3C028783.2 Cucumis melo HOM05D011461 ORTHO05D000062 1.7e-15 86.3 67 64.2
MELO3C033122.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.5e-14 83.2 56 67.9
MELO3C034883.2 Cucumis melo HOM05D011461 ORTHO05D003213 4.2e-14 81.6 55 69.1
MELO3C031108.2 Cucumis melo HOM05D011461 ORTHO05D003213 2.1e-13 79.3 57 64.9
MELO3C033743.2 Cucumis melo HOM05D011461 ORTHO05D003213 3.0e-12 75.5 48 72.9
MELO3C028709.2 Cucumis melo HOM05D011461 ORTHO05D003213 4.0e-12 75.1 48 68.8
MELO3C031723.2 Cucumis melo HOM05D011461 ORTHO05D003213 5.2e-12 74.7 55 63.6
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-11 73.6 88 38.6
MBI11_g22671_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.2e-10 69.3 81 39.5
MBI06_g42454_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 2.8e-10 68.9 81 35.8
CSS0003322 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.8e-10 68.2 116 33.6
CSS0012803 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.8e-10 68.2 116 33.6
CSS0024740 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.8e-10 68.2 116 33.6
CSS0032482 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.8e-10 68.2 116 33.6
CSS0047068 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.8e-10 68.2 116 33.6
CSS0048301 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.8e-10 68.2 116 33.6
Oeu027214.1 Olea europaea HOM05D000107 ORTHO05D003213 1.4e-09 66.6 109 33.9
PGR102G0480 Punica granatum HOM05D000107 ORTHO05D000062 1.4e-09 66.6 78 38.5
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 1.8e-09 66.2 81 39.5
Atru.chr6.2082 Acer truncatum HOM05D000107 ORTHO05D000062 3.1e-09 65.5 73 38.4
MBI06_g15134_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.1e-09 65.1 81 34.6
CANSAT01G1055 Cannabis sativa HOM05D000107 ORTHO05D000062 7.0e-09 64.3 109 32.1
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-08 63.5 81 38.3
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-08 63.5 110 32.7
RhsimUnG0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-08 63.5 81 38.3
CANSAT80G0114 Cannabis sativa HOM05D000107 ORTHO05D000062 1.6e-08 63.2 113 32.7
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-08 62.0 109 33.0
Oeu005851.1 Olea europaea HOM05D000107 ORTHO05D003213 4.5e-08 61.6 108 33.3
CSS0022362 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.9e-08 61.2 78 34.6
QL12p013571 Quercus lobata HOM05D000107 ORTHO05D000062 5.9e-08 61.2 73 35.6
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-08 61.2 91 34.1
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-08 61.2 91 34.1
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-08 61.2 91 34.1
Oeu017731.1 Olea europaea HOM05D000107 ORTHO05D003213 1.0e-07 60.5 93 30.1
Oeu017732.1 Olea europaea HOM05D000107 ORTHO05D003213 1.0e-07 60.5 93 30.1
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 60.1 92 31.5
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 60.1 92 31.5
Rhsim10G0071800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 60.1 81 35.8
CANSAT78G0770 Cannabis sativa HOM05D000107 ORTHO05D000062 1.7e-07 59.7 108 25.9
CANSAT80G1283 Cannabis sativa HOM05D013174 ORTHO05D015289 2.3e-07 59.3 109 32.1
MBI08_g15727_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D003213 2.3e-07 59.3 73 38.4
QL05p055903 Quercus lobata HOM05D000240 ORTHO05D003213 2.3e-07 59.3 93 31.2
CANSAT54G1543 Cannabis sativa HOM05D000107 ORTHO05D000062 2.9e-07 58.9 79 31.6
CANSAT71G0016 Cannabis sativa HOM05D000107 ORTHO05D000062 2.9e-07 58.9 79 31.6
RhsimUnG0068500 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-07 58.9 73 38.4
CANSAT25G1518 Cannabis sativa HOM05D000107 ORTHO05D000062 3.8e-07 58.5 73 32.9
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-07 58.5 92 30.4
Oeu062448.1 Olea europaea HOM05D000107 ORTHO05D003213 5.0e-07 58.2 89 30.3
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.6e-07 57.8 92 28.3
MELO3C032774.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.6e-07 57.4 43 62.8
Lj8C456G3 Lonicera japonica HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 32.3
MBI18_g23349_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 1.1e-06 57.0 64 39.1
PSO017G5467 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.0 110 32.7
Rhsim01G0164300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 57.0 92 28.3
Rhsim04G0033300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 57.0 92 28.3
CANSAT56G2720 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 56.6 70 34.3
MELO3C029231.2 Cucumis melo HOM05D001963 ORTHO05D003213 1.5e-06 56.6 38 68.4
QL01p002857 Quercus lobata HOM05D000240 ORTHO05D003213 1.5e-06 56.6 93 31.2
QL04p081146 Quercus lobata HOM05D000107 ORTHO05D003213 1.5e-06 56.6 93 31.2
CANSAT01G2457 Cannabis sativa HOM05D000107 ORTHO05D000062 1.9e-06 56.2 73 32.9
Oeu030082.1 Olea europaea HOM05D000107 ORTHO05D003213 1.9e-06 56.2 93 28.0
Oeu030830.1 Olea europaea HOM05D000107 ORTHO05D003213 1.9e-06 56.2 109 29.4
CANSAT64G0358 Cannabis sativa HOM05D000107 ORTHO05D000062 2.5e-06 55.8 88 33.0
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.3e-06 55.5 65 35.4
Aqoxy1G03105 Aquilegia oxysepala HOM05D000107 ORTHO05D003213 5.5e-06 54.7 73 39.7
Oeu004802.1 Olea europaea HOM05D000107 ORTHO05D003213 5.5e-06 54.7 109 29.4
Aqoxy2G01704 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 7.2e-06 54.3 95 29.5
CANSAT25G2889 Cannabis sativa HOM05D000107 ORTHO05D000062 7.2e-06 54.3 73 32.9
CANSAT78G0768 Cannabis sativa HOM05D000107 ORTHO05D000062 7.2e-06 54.3 73 32.9
HanXRQChr05g0142351 Helianthus annuus HOM05D000107 ORTHO05D000062 7.2e-06 54.3 64 35.9
MBI16_g22305_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 7.2e-06 54.3 64 34.4
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.2e-06 54.3 111 27.0
Oeu018272.1 Olea europaea HOM05D000107 ORTHO05D003213 9.5e-06 53.9 109 30.3
Rhsim09G0057000 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.5e-06 53.9 78 30.8
Rhsim09G0096400 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.5e-06 53.9 108 32.4


User provided reference genes

Program Settings