Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034226.2 Cucumis melo HOM05D001033 ORTHO05D004888 1.7e-27 125.2 59 100.0
EL10Ac5g11368 Beta vulgaris HOM05D001033 ORTHO05D004888 9.1e-13 76.3 60 68.3
CAN.G1183.6 Capsicum annuum HOM05D001033 ORTHO05D004888 7.7e-12 73.2 46 73.9
CAN.G219.25 Capsicum annuum HOM05D001033 ORTHO05D004888 7.7e-12 73.2 46 73.9
CAN.G386.17 Capsicum annuum HOM05D000388 ORTHO05D004888 7.7e-12 73.2 46 73.9
Gohir.A10G200850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 7.7e-12 73.2 35 91.4
Nitab4.5_0001841g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 7.7e-12 73.2 46 76.1
Solyc00g500061.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 7.7e-12 73.2 46 73.9
PGSC0003DMG400002651 Solanum tuberosum HOM05D001033 ORTHO05D004888 7.7e-12 73.2 46 73.9
Eucgr.A02747 Eucalyptus grandis HOM05D001033 ORTHO05D004888 1.0e-11 72.8 35 91.4
DCAR_022590 Daucus carota HOM05D013260 ORTHO05D004888 1.3e-11 72.4 35 88.6
DCAR_032487 Daucus carota HOM05D001033 ORTHO05D004888 1.3e-11 72.4 35 88.6
FAN19G1182 Fragaria x ananassa HOM05D001033 ORTHO05D004888 1.3e-11 72.4 35 88.6
MELO3C029536.2 Cucumis melo HOM05D001033 ORTHO05D004888 2.2e-11 71.6 53 66.0
COL.COLO4_03102 Corchorus olitorius HOM05D001033 ORTHO05D004888 2.9e-11 71.2 53 66.0
Gohir.1Z049399 Gossypium hirsutum HOM05D001033 ORTHO05D004888 2.9e-11 71.2 53 66.0
Gohir.A09G102100 Gossypium hirsutum HOM05D001033 ORTHO05D004888 2.9e-11 71.2 53 66.0
Gohir.D01G102242 Gossypium hirsutum HOM05D001033 ORTHO05D004888 2.9e-11 71.2 53 66.0
Gohir.D03G073392 Gossypium hirsutum HOM05D001033 ORTHO05D004888 2.9e-11 71.2 53 66.0
Gorai.001G177200 Gossypium raimondii HOM05D001033 ORTHO05D004888 2.9e-11 71.2 53 66.0
HanXRQChr17g0559251 Helianthus annuus HOM05D001033 ORTHO05D004888 2.9e-11 71.2 35 88.6
RcHm_v2.0_Chr7g0209391 Rosa chinensis HOM05D001033 ORTHO05D004888 2.9e-11 71.2 53 66.0
Sc19g0006000 Simmondsia chinensis HOM05D001033 ORTHO05D004888 2.9e-11 71.2 53 66.0
Ah.09g227310 Amaranthus hybridus HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
Ah.10g027550 Amaranthus hybridus HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
EL10As12g24022 Beta vulgaris HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
EL10As1g23049 Beta vulgaris HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
EL10As5g23626 Beta vulgaris HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
Lj4g0025955 Lotus japonicus HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
LjContig00318g0025596 Lotus japonicus HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
Nn021s41548 Nelumbo nucifera HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
Nn055s41942 Nelumbo nucifera HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
Nn071s42392 Nelumbo nucifera HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
Prupe.1G270900 Prunus persica HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
RcHm_v2.0_CPg0502181 Rosa chinensis HOM05D001033 ORTHO05D004888 3.8e-11 70.9 53 66.0
Hma1.2p1_2223F.1_g317410 Hydrangea macrophylla HOM05D001033 ORTHO05D004888 5.0e-11 70.5 53 64.2
Medtr4g035040 Medicago truncatula HOM05D001033 ORTHO05D004888 5.0e-11 70.5 53 64.2
Medtr7g021800 Medicago truncatula HOM05D001033 ORTHO05D004888 5.0e-11 70.5 53 64.2
PSO548G0080 Papaver somniferum HOM05D001033 ORTHO05D004888 5.0e-11 70.5 53 64.2
Peaxi162Scf00110g00002 Petunia axillaris HOM05D001033 ORTHO05D004888 5.0e-11 70.5 53 64.2
Peaxi162Scf00334g00124 Petunia axillaris HOM05D001033 ORTHO05D004888 5.0e-11 70.5 53 64.2
arahy.Tifrunner.gnm1.ann1.WN69VX Arachis hypogaea HOM05D001033 ORTHO05D004888 6.5e-11 70.1 53 66.0
CSS0012650 Camellia sinensis var. sinensis HOM05D001033 ORTHO05D004888 8.5e-11 69.7 53 62.3
Migut.D01354 Erythranthe guttata HOM05D001033 ORTHO05D004888 8.5e-11 69.7 53 62.3
Migut.D01427 Erythranthe guttata HOM05D001033 ORTHO05D004888 8.5e-11 69.7 53 62.3
Nitab4.5_0001761g0190 Nicotiana tabacum HOM05D001033 ORTHO05D004888 8.5e-11 69.7 44 75.0
HanXRQChr00c0345g0573891 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr00c0702g0576871 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr02g0041501 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr02g0044951 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr07g0201011 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr08g0210301 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr09g0274591 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr10g0283491 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr10g0289211 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr10g0303781 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQChr11g0326761 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
HanXRQCPg0579971 Helianthus annuus HOM05D001033 ORTHO05D004888 1.1e-10 69.3 53 64.2
PGR111G0105 Punica granatum HOM05D001033 ORTHO05D004888 1.4e-10 68.9 53 64.2
PGSC0003DMG400019224 Solanum tuberosum HOM05D001033 ORTHO05D004888 1.4e-10 68.9 46 67.4
CAN.G91.9 Capsicum annuum HOM05D001033 ORTHO05D004888 1.9e-10 68.6 51 64.7
CARHR282040 Cardamine hirsuta HOM05D001033 ORTHO05D004888 1.9e-10 68.6 35 85.7
Haze_27536 Corylus avellana HOM05D001033 ORTHO05D004888 1.9e-10 68.6 53 64.2
Potri.013G163200 Populus trichocarpa HOM05D001033 ORTHO05D004888 1.9e-10 68.6 53 64.2
Sed0001763 Sechium edule HOM05D001033 ORTHO05D004888 1.9e-10 68.6 53 64.2
BolC9t55818H Brassica oleracea HOM05D001033 ORTHO05D004888 2.5e-10 68.2 53 64.2
BolSC35t60639H Brassica oleracea HOM05D001033 ORTHO05D004888 2.5e-10 68.2 53 64.2
QL93p0270_0002 Quercus lobata HOM05D001033 ORTHO05D004888 2.5e-10 68.2 53 64.2
VMungo0498G0002 Vigna mungo HOM05D001033 ORTHO05D004888 3.2e-10 67.8 53 62.3
Lsat_1_v5_gn_2_5601 Lactuca sativa HOM05D001033 ORTHO05D004888 4.2e-10 67.4 51 64.7
Lalb_Chr03g0039371 Lupinus albus HOM05D001033 ORTHO05D004888 4.2e-10 67.4 53 62.3
Lalb_Chr07g0192281 Lupinus albus HOM05D001033 ORTHO05D004888 4.2e-10 67.4 53 62.3
Lalb_Chr20g0115661 Lupinus albus HOM05D001033 ORTHO05D004888 4.2e-10 67.4 53 62.3
Phvul.011G056548 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 4.2e-10 67.4 53 60.4
SalBow1G1376 Salvia bowleyana HOM05D001033 ORTHO05D004888 4.2e-10 67.4 53 60.4
unitig_87.g27944 Utricularia gibba HOM05D000388 ORTHO05D004888 5.5e-10 67.0 35 80.0
unitig_91.g26504 Utricularia gibba HOM05D001033 ORTHO05D004888 5.5e-10 67.0 35 80.0
AL2G20710 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
AL2G21460 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
ATCG00420 Arabidopsis thaliana HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BNapus_Darmor_BZH_scaffold_253p00160 Brassica napus HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BNapus_Darmor_BZH_scaffold_287p00080 Brassica napus HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
C02p43470 Brassica napus HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
C09p40480 Brassica napus HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BolSC29t60459H Brassica oleracea HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BolSC29t60582H Brassica oleracea HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BolSC45t60865H Brassica oleracea HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BolSC45t60947H Brassica oleracea HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BolSC46t61041H Brassica oleracea HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BolSC47t61103H Brassica oleracea HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BraSC25t45841Z Brassica rapa HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BraSC25t45874Z Brassica rapa HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BraSC58t46413Z Brassica rapa HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
BraSC58t46484Z Brassica rapa HOM05D001033 ORTHO05D004888 7.2e-10 66.6 53 62.3
HanXRQChr10g0285321 Helianthus annuus HOM05D001033 ORTHO05D004888 9.4e-10 66.2 53 62.3
Lsat_1_v5_gn_3_99221 Lactuca sativa HOM05D001033 ORTHO05D004888 1.2e-09 65.9 51 62.7
Lsat_1_v5_gn_3_99300 Lactuca sativa HOM05D001033 ORTHO05D004888 1.2e-09 65.9 51 62.7
Lsat_1_v5_gn_4_40440 Lactuca sativa HOM05D001033 ORTHO05D004888 1.2e-09 65.9 51 62.7
CAN.G170.11 Capsicum annuum HOM05D001033 ORTHO05D004888 1.6e-09 65.5 46 67.4
SGA_v2.0_scaffold781G53594 Striga asiatica HOM05D001033 ORTHO05D004888 6.1e-09 63.5 55 56.4
TWI36G0295 Tripterygium wilfordii HOM05D001033 ORTHO05D004888 6.1e-09 63.5 53 64.2
BraA06t25427Z Brassica rapa HOM05D001033 ORTHO05D004888 7.9e-09 63.2 35 80.0
MBI06_g39081_MAGBIO Magnolia biondii HOM05D001033 ORTHO05D004888 7.9e-09 63.2 33 81.8
EL10As15g24143 Beta vulgaris HOM05D001033 ORTHO05D004888 1.4e-08 62.4 31 90.3
BolC7t41665H Brassica oleracea HOM05D001033 ORTHO05D004888 1.4e-08 62.4 53 58.5
A06p23250 Brassica napus HOM05D001033 ORTHO05D004888 2.3e-08 61.6 35 77.1
Lalb_Chr03g0030871 Lupinus albus HOM05D001033 ORTHO05D004888 2.3e-08 61.6 30 90.0
Medtr0002s0630 Medicago truncatula HOM05D001033 ORTHO05D004888 5.1e-08 60.5 34 82.4
SEGI_08348 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 8.8e-08 59.7 35 74.3
SEGI_19633 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 8.8e-08 59.7 35 74.3
SEGI_20198 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 8.8e-08 59.7 35 74.3
SEGI_35798 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 8.8e-08 59.7 35 74.3
SEGI_38193 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 8.8e-08 59.7 35 74.3
EL10Ac9g20715 Beta vulgaris HOM05D001033 ORTHO05D004888 2.6e-07 58.2 32 84.4
Thhalv10010993m.g Eutrema salsugineum HOM05D001033 ORTHO05D004888 3.3e-07 57.8 53 54.7
BolSC46t60994H Brassica oleracea HOM05D001033 ORTHO05D004888 1.7e-06 55.5 28 85.7


User provided reference genes

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