Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.9e-119 432.6 223 100.0
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 1.2e-62 243.8 197 69.5
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 4.6e-33 145.6 97 82.5
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 4.3e-31 139.0 98 75.5
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 9.6e-31 137.9 122 60.7
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.6e-30 137.1 181 50.8
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 1.6e-30 137.1 123 62.6
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 2.1e-30 136.7 101 74.3
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.1e-30 136.7 101 74.3
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.1e-30 136.7 101 74.3
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 2.8e-30 136.3 101 72.3
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 3.6e-30 136.0 101 73.3
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.6e-30 136.0 101 73.3
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.6e-30 136.0 101 73.3
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 6.2e-30 135.2 101 73.3
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 8.1e-30 134.8 101 70.3
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.1e-29 134.4 101 72.3
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 1.1e-29 134.4 101 73.3
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 1.4e-29 134.0 101 71.3
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 1.4e-29 134.0 101 72.3
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.4e-29 134.0 101 72.3
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 1.8e-29 133.7 101 72.3
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 1.8e-29 133.7 101 72.3
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 1.8e-29 133.7 101 70.3
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 1.8e-29 133.7 98 71.4
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 1.8e-29 133.7 101 71.3
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 2.4e-29 133.3 101 68.3
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 2.4e-29 133.3 101 72.3
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 2.4e-29 133.3 101 72.3
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 3.1e-29 132.9 101 70.3
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 3.1e-29 132.9 101 69.3
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 3.1e-29 132.9 101 70.3
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 4.0e-29 132.5 101 72.3
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 4.0e-29 132.5 101 71.3
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 4.0e-29 132.5 101 71.3
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 4.0e-29 132.5 101 72.3
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 4.0e-29 132.5 101 69.3
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.0e-29 132.5 101 71.3
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 5.3e-29 132.1 100 71.0
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 5.3e-29 132.1 101 71.3
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 6.9e-29 131.7 101 70.3
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 6.9e-29 131.7 101 71.3
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 1.2e-28 131.0 101 72.3
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 2.0e-28 130.2 101 67.3
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 2.0e-28 130.2 101 69.3
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.0e-28 130.2 101 70.3
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 2.6e-28 129.8 101 71.3
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 2.6e-28 129.8 101 70.3
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 3.4e-28 129.4 98 71.4
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 3.4e-28 129.4 101 71.3
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 5.8e-28 128.6 101 69.3
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 5.8e-28 128.6 101 66.3
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 7.6e-28 128.3 101 68.3
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 7.6e-28 128.3 101 67.3
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 9.9e-28 127.9 149 50.3
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 1.3e-27 127.5 101 68.3
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.7e-27 127.1 101 68.3
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 1.7e-27 127.1 101 68.3
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 2.2e-27 126.7 95 70.5
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 2.9e-27 126.3 165 48.5
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 2.9e-27 126.3 101 70.3
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 4.9e-27 125.6 101 68.3
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 1.1e-26 124.4 101 63.4
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 1.1e-26 124.4 101 65.3
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.9e-26 123.6 92 67.4
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 7.1e-26 121.7 100 69.0
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 1.2e-25 120.9 101 62.4
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 1.2e-25 120.9 101 62.4
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.6e-25 120.6 101 64.4
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.1e-25 120.2 92 72.8
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 6.0e-25 118.6 101 65.3
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.9e-25 118.2 101 67.3
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 1.8e-24 117.1 101 61.4
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 5.1e-24 115.5 101 63.4
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 8.7e-24 114.8 117 56.4
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 4.3e-23 112.5 94 64.9
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 1.3e-22 110.9 101 58.4
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 4.8e-22 109.0 92 64.1
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 4.0e-21 105.9 165 46.1
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 5.3e-21 105.5 101 60.4
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 2.0e-20 103.6 101 55.4
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 1.3e-19 100.9 79 72.2
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 4.9e-19 99.0 69 65.2
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 8.4e-19 98.2 66 71.2
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 1.9e-18 97.1 101 54.5
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 2.4e-18 96.7 89 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 5.5e-18 95.5 101 51.5
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 7.9e-17 91.7 60 78.3
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.0e-16 89.7 160 42.5
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 1.1e-15 87.8 101 52.5
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 1.9e-15 87.0 53 81.1
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 5.6e-15 85.5 52 80.8
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.6e-15 85.5 155 43.9
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 1.3e-14 84.3 100 52.0
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 3.7e-14 82.8 48 81.2
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 1.8e-13 80.5 101 46.5
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 2.4e-13 80.1 101 49.5
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 3.1e-13 79.7 101 49.5
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 6.9e-13 78.6 109 47.7
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.8e-12 75.5 61 70.5
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 7.6e-12 75.1 137 41.6
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 2.7e-09 66.6 42 71.4
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 4.6e-09 65.9 40 75.0
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 7.9e-09 65.1 40 77.5
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-06 57.0 87 43.7


User provided reference genes

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