Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 3.1e-89 332.0 200 100.0
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 7.5e-27 124.8 167 64.7
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 7.3e-14 81.6 67 74.6
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 2.8e-13 79.7 66 72.7
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 3.6e-13 79.3 67 73.1
MELO3C033194.2 Cucumis melo HOM05D005607 ORTHO05D168223 2.0e-11 73.6 127 55.9
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 7.6e-11 71.6 67 64.2
MELO3C035675.2 Cucumis melo HOM05D005607 ORTHO05D166573 2.2e-10 70.1 131 43.5
MELO3C021649.2 Cucumis melo HOM05D005607 ORTHO05D167078 2.9e-10 69.7 99 44.4
MELO3C029056.2 Cucumis melo HOM05D005607 ORTHO05D170482 2.9e-10 69.7 130 41.5
MELO3C033822.2 Cucumis melo HOM05D005607 ORTHO05D000012 8.4e-10 68.2 89 48.3
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 4.1e-09 65.9 70 55.7
MELO3C035653.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.2e-09 64.7 98 60.2
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 9.2e-09 64.7 81 50.6
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.2e-08 64.3 69 56.5
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.6e-08 63.9 69 56.5
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 2.1e-08 63.5 65 56.9
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 3.5e-08 62.8 66 57.6
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 4.6e-08 62.4 69 53.6
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 4.6e-08 62.4 69 53.6
MELO3C030928.2 Cucumis melo HOM05D005607 ORTHO05D170178 4.6e-08 62.4 72 83.3
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 4.6e-08 62.4 69 55.1
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 6.0e-08 62.0 65 56.9
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 7.8e-08 61.6 69 53.6
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 7.8e-08 61.6 69 53.6
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.0e-07 61.2 69 53.6
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 1.0e-07 61.2 69 50.7
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 1.3e-07 60.8 69 52.2
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.3e-07 60.8 66 53.0
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 3.0e-07 59.7 66 53.0
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 3.0e-07 59.7 66 53.0
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 3.0e-07 59.7 69 49.3
MELO3C033728.2 Cucumis melo HOM05D005607 ORTHO05D169673 5.1e-07 58.9 49 63.3
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 5.1e-07 58.9 64 54.7
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 5.1e-07 58.9 65 53.8
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 5.1e-07 58.9 66 53.0
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 5.1e-07 58.9 66 48.5
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 8.7e-07 58.2 69 49.3
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 1.5e-06 57.4 69 55.1
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 1.5e-06 57.4 66 51.5
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 1.5e-06 57.4 69 47.8
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.9e-06 57.0 65 50.8
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 1.9e-06 57.0 66 53.0
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 1.9e-06 57.0 69 49.3
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 2.5e-06 56.6 67 49.3
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 2.5e-06 56.6 65 49.2
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 3.3e-06 56.2 64 53.1
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 4.3e-06 55.8 66 51.5
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 5.6e-06 55.5 66 51.5
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 7.3e-06 55.1 66 51.5
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 9.6e-06 54.7 66 50.0
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 9.6e-06 54.7 69 55.1


User provided reference genes

Program Settings