Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.7e-159 565.5 324 100.0
MELO3C029056.2 Cucumis melo HOM05D005607 ORTHO05D170482 3.9e-33 146.4 262 43.5
MELO3C035675.2 Cucumis melo HOM05D005607 ORTHO05D166573 6.7e-33 145.6 269 43.5
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 1.1e-32 144.8 95 87.4
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.7e-32 142.5 95 86.3
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.1e-30 138.3 113 71.7
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 1.9e-27 127.5 113 66.4
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 1.3e-25 121.3 167 64.7
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 3.7e-23 113.2 116 55.2
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 3.1e-22 110.2 91 64.8
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.5e-21 107.8 95 62.1
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 2.0e-21 107.5 95 61.1
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 5.9e-21 105.9 88 62.5
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 5.9e-21 105.9 150 46.0
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.0e-20 105.1 95 61.1
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.3e-20 104.8 95 61.1
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.7e-20 104.4 95 60.0
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.7e-20 104.4 112 53.6
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 2.2e-20 104.0 92 58.7
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 2.2e-20 104.0 143 49.0
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 2.9e-20 103.6 91 59.3
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 2.9e-20 103.6 95 62.1
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 3.8e-20 103.2 95 63.2
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 6.5e-20 102.4 95 57.9
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 1.1e-19 101.7 91 58.2
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.9e-19 100.9 90 60.0
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.9e-19 100.9 90 60.0
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 2.5e-19 100.5 96 59.4
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 4.2e-19 99.8 132 47.0
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.2e-18 98.2 95 60.0
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 1.2e-18 98.2 91 59.3
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 1.2e-18 98.2 91 56.0
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.6e-18 97.8 89 56.2
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 2.1e-18 97.4 95 60.0
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 2.1e-18 97.4 90 55.6
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 2.7e-18 97.1 95 58.9
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 6.1e-18 95.9 111 50.5
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 6.1e-18 95.9 91 61.5
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 7.9e-18 95.5 95 56.8
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 7.9e-18 95.5 95 54.7
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 7.9e-18 95.5 112 49.1
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.0e-17 95.1 112 49.1
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 1.8e-17 94.4 91 60.4
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 2.3e-17 94.0 95 54.7
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 2.3e-17 94.0 115 53.9
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 2.3e-17 94.0 93 57.0
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 3.9e-17 93.2 102 53.9
MELO3C030928.2 Cucumis melo HOM05D005607 ORTHO05D170178 6.7e-17 92.4 284 41.9
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 8.8e-17 92.0 112 50.0
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 8.8e-17 92.0 95 53.7
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 8.8e-17 92.0 95 52.6
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 1.1e-16 91.7 95 52.6
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 2.0e-16 90.9 150 42.0
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 2.0e-16 90.9 114 47.4
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 2.0e-16 90.9 93 53.8
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 2.5e-16 90.5 135 44.4
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 2.5e-16 90.5 157 42.7
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 2.5e-16 90.5 83 56.6
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 3.3e-16 90.1 135 43.0
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 4.3e-16 89.7 135 46.7
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 4.3e-16 89.7 134 45.5
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 4.3e-16 89.7 95 54.7
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 4.3e-16 89.7 89 52.8
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 7.4e-16 89.0 137 47.4
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 9.7e-16 88.6 91 53.8
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 1.7e-15 87.8 91 54.9
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 2.2e-15 87.4 137 46.0
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.2e-15 87.4 135 42.2
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 2.2e-15 87.4 110 48.2
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 2.2e-15 87.4 96 50.0
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 4.8e-15 86.3 95 50.5
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 6.3e-15 85.9 95 49.5
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 6.3e-15 85.9 86 65.1
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 6.3e-15 85.9 150 42.7
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 6.3e-15 85.9 150 42.7
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 8.2e-15 85.5 91 53.8
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.1e-14 85.1 88 53.4
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.1e-14 85.1 136 41.9
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 1.1e-14 85.1 135 43.7
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 1.4e-14 84.7 135 40.7
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 1.4e-14 84.7 135 41.5
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 2.4e-14 84.0 100 45.0
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 3.1e-14 83.6 94 46.8
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 3.1e-14 83.6 94 46.8
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 4.1e-14 83.2 88 52.3
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 6.9e-14 82.4 95 46.3
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 6.9e-14 82.4 88 52.3
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 9.1e-14 82.0 95 46.3
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 1.2e-13 81.6 94 46.8
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 1.5e-13 81.3 135 40.0
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 1.5e-13 81.3 94 45.7
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.5e-13 81.3 100 44.0
MELO3C033194.2 Cucumis melo HOM05D005607 ORTHO05D168223 1.5e-13 81.3 110 60.9
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 2.6e-13 80.5 97 47.4
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 3.4e-13 80.1 135 37.8
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 5.9e-13 79.3 94 44.7
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 5.9e-13 79.3 94 44.7
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 5.9e-13 79.3 91 45.1
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 2.2e-12 77.4 94 41.5
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 2.9e-12 77.0 92 45.7
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 2.9e-12 77.0 135 37.0
MELO3C033728.2 Cucumis melo HOM05D005607 ORTHO05D169673 3.8e-12 76.6 47 85.1
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 3.8e-12 76.6 94 48.9
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 8.5e-12 75.5 137 38.0
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 3.2e-11 73.6 91 41.8
MELO3C033822.2 Cucumis melo HOM05D005607 ORTHO05D000012 1.6e-10 71.2 76 51.3
MELO3C021649.2 Cucumis melo HOM05D005607 ORTHO05D167078 2.7e-10 70.5 92 48.9
MELO3C035653.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.1e-10 69.3 167 41.3
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.4e-09 68.2 91 36.3
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 2.3e-09 67.4 93 44.1
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 1.1e-08 65.1 91 37.4
MELO3C028854.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.5e-08 64.7 47 68.1
MELO3C034152.2 Cucumis melo HOM05D005607 ORTHO05D167546 2.2e-07 60.8 39 89.7
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 3.7e-07 60.1 170 34.1
MELO3C034779.2 Cucumis melo HOM05D000107 ORTHO05D000062 1.1e-06 58.5 40 65.0
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 5.3e-06 56.2 45 68.9
MELO3C034322.2 Cucumis melo HOM05D001963 ORTHO05D001863 7.0e-06 55.8 113 38.1


User provided reference genes

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