Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033787.2 Cucumis melo HOM05D009026 ORTHO05D011369 3.8e-30 134.0 62 100.0
MELO3C005270.2 Cucumis melo HOM05D009026 ORTHO05D011369 4.1e-24 114.0 62 87.1
MELO3C033786.2 Cucumis melo HOM05D009026 ORTHO05D011369 4.1e-24 114.0 62 87.1
Cpa.g.sc263.3 Carica papaya HOM05D009026 ORTHO05D011369 3.3e-21 104.4 62 80.6
Cfa023012 Carpinus fangiana HOM05D009026 ORTHO05D011369 1.6e-20 102.1 62 79.0
QL10p061779 Quercus lobata HOM05D009026 ORTHO05D011369 2.1e-20 101.7 61 78.7
Sopen05g012660 Solanum pennellii HOM05D009026 ORTHO05D011369 8.0e-20 99.8 62 77.4
LjContig00315g0016791 Lotus japonicus HOM05D009026 ORTHO05D011369 2.3e-19 98.2 61 77.0
LjContig00315g0017150 Lotus japonicus HOM05D009026 ORTHO05D011369 2.3e-19 98.2 61 77.0
Psat3g040200 Pisum sativum HOM05D009026 ORTHO05D011369 4.0e-19 97.4 59 78.0
TPR.G20553 Trifolium pratense HOM05D009026 ORTHO05D011369 4.0e-19 97.4 59 78.0
Nitab4.5_0004300g0210 Nicotiana tabacum HOM05D009026 ORTHO05D011369 5.8e-18 93.6 62 74.2
Sopen05g012650 Solanum pennellii HOM05D009026 ORTHO05D011369 1.3e-17 92.4 62 74.2
Glyma.17G185400 Glycine max HOM05D009026 ORTHO05D011369 1.7e-17 92.0 61 72.1
MELO3C033550.2 Cucumis melo HOM05D009026 ORTHO05D011369 1.9e-16 88.6 59 72.9
PGSC0003DMG400017855 Solanum tuberosum HOM05D009026 ORTHO05D011369 1.9e-16 88.6 62 69.4
HPP92_026906 Vanilla planifolia HOM05D009026 ORTHO05D011369 4.1e-16 87.4 62 67.7
Nitab4.5_0000161g0010 Nicotiana tabacum HOM05D009026 ORTHO05D011369 7.8e-15 83.2 62 67.7
CDE02G0817 Ceratophyllum demersum HOM05D009026 ORTHO05D011369 1.9e-13 78.6 45 80.0
Nitab4.5_0000866g0200 Nicotiana tabacum HOM05D009026 ORTHO05D011369 3.3e-13 77.8 50 76.0
Peaxi162Scf00651g00613 Petunia axillaris HOM05D009026 ORTHO05D011369 3.3e-13 77.8 54 72.2
Nitab4.5_0001702g0040 Nicotiana tabacum HOM05D009026 ORTHO05D011369 9.5e-13 76.3 49 73.5
Nitab4.5_0001922g0040 Nicotiana tabacum HOM05D009026 ORTHO05D011369 1.6e-12 75.5 48 75.0
ATR0609G099 Amborella trichopoda HOM05D009026 ORTHO05D011369 2.8e-12 74.7 44 79.5
Solyc07g017930.1 Solanum lycopersicum HOM05D009026 ORTHO05D011369 6.0e-07 57.0 40 65.0


User provided reference genes

Program Settings