Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033736.2 Cucumis melo HOM05D004221 ORTHO05D004998 1.8e-27 125.2 64 100.0
CsaV3_5G020730 Cucumis sativus L. HOM05D004221 ORTHO05D004998 1.8e-27 125.2 64 100.0
ClCG01G008100 Citrullus lanatus HOM05D004221 ORTHO05D004998 4.1e-27 124.0 64 98.4
MELO3C000273.2 Cucumis melo HOM05D004221 ORTHO05D004998 5.4e-27 123.6 64 98.4
THA.LOC104800677 Tarenaya hassleriana HOM05D004221 ORTHO05D004998 1.1e-24 115.9 64 90.6
Lj3A847T45 Lonicera japonica HOM05D004221 ORTHO05D004998 1.5e-24 115.5 64 90.6
Sed0003164 Sechium edule HOM05D004221 ORTHO05D004998 1.5e-24 115.5 64 92.2
Hund24383 Selenicereus undatus HOM05D004221 ORTHO05D004998 1.5e-24 115.5 64 90.6
CSS0001435 Camellia sinensis var. sinensis HOM05D004221 ORTHO05D004998 2.5e-24 114.8 64 89.1
PGR044G1895 Punica granatum HOM05D004221 ORTHO05D004998 7.3e-24 113.2 64 87.5
DCAR_023468 Daucus carota HOM05D004221 ORTHO05D004998 9.5e-24 112.8 64 87.5
Ah.01g012690 Amaranthus hybridus HOM05D004221 ORTHO05D004998 1.2e-23 112.5 64 85.9
Cc00_g07040 Coffea canephora HOM05D004221 ORTHO05D004998 1.2e-23 112.5 64 89.1
Nn3g18605 Nelumbo nucifera HOM05D004221 ORTHO05D004998 1.2e-23 112.5 64 89.1
PSO017G5121 Papaver somniferum HOM05D004221 ORTHO05D004998 1.2e-23 112.5 64 87.5
PSO170G6579 Papaver somniferum HOM05D004221 ORTHO05D004998 1.2e-23 112.5 64 87.5
Gohir.A01G012400 Gossypium hirsutum HOM05D004221 ORTHO05D004998 1.6e-23 112.1 64 87.5
Hma1.2p1_0513F.1_g169420 Hydrangea macrophylla HOM05D004221 ORTHO05D004998 1.6e-23 112.1 64 87.5
THA.LOC104818379 Tarenaya hassleriana HOM05D004221 ORTHO05D004998 1.6e-23 112.1 64 87.5
GSVIVG01026144001 Vitis vinifera HOM05D004221 ORTHO05D004998 1.6e-23 112.1 64 89.1
Aa31LG11G2750 Aethionema arabicum HOM05D004221 ORTHO05D004998 2.1e-23 111.7 64 87.5
AL6G34550 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 2.8e-23 111.3 64 87.5
AT5G23290 Arabidopsis thaliana HOM05D004221 ORTHO05D004998 2.8e-23 111.3 64 87.5
Carub.0006s2106 Capsella rubella HOM05D004221 ORTHO05D004998 2.8e-23 111.3 64 87.5
COL.COLO4_33086 Corchorus olitorius HOM05D004221 ORTHO05D004998 2.8e-23 111.3 64 85.9
Thecc.02G156600 Theobroma cacao HOM05D004221 ORTHO05D004998 2.8e-23 111.3 64 84.4
CARHR190250 Cardamine hirsuta HOM05D004221 ORTHO05D004998 3.6e-23 110.9 64 87.5
Duzib132G0545 Durio zibethinus HOM05D004221 ORTHO05D004998 3.6e-23 110.9 64 84.4
Duzib132G0858 Durio zibethinus HOM05D004221 ORTHO05D004998 3.6e-23 110.9 64 84.4
Thhalv10005074m.g Eutrema salsugineum HOM05D004221 ORTHO05D004998 3.6e-23 110.9 64 87.5
CAN.G282.46 Capsicum annuum HOM05D004221 ORTHO05D004998 4.7e-23 110.5 64 87.5
Duzib132G0203 Durio zibethinus HOM05D004221 ORTHO05D004998 4.7e-23 110.5 64 84.4
Gorai.002G015400 Gossypium raimondii HOM05D004221 ORTHO05D004998 4.7e-23 110.5 64 87.5
Nitab4.5_0000069g0160 Nicotiana tabacum HOM05D004221 ORTHO05D004998 4.7e-23 110.5 64 87.5
Nitab4.5_0013217g0020 Nicotiana tabacum HOM05D004221 ORTHO05D004998 4.7e-23 110.5 64 87.5
Solyc01g008270.3 Solanum lycopersicum HOM05D004221 ORTHO05D004998 4.7e-23 110.5 64 87.5
Sopen01g003790 Solanum pennellii HOM05D004221 ORTHO05D004998 4.7e-23 110.5 64 87.5
PGSC0003DMG400016397 Solanum tuberosum HOM05D004221 ORTHO05D004998 4.7e-23 110.5 64 87.5
Cpa.g.sc60.76 Carica papaya HOM05D004221 ORTHO05D004998 6.1e-23 110.2 64 82.8
Gohir.D01G013600 Gossypium hirsutum HOM05D004221 ORTHO05D004998 6.1e-23 110.2 64 85.9
vmacro15987 Vaccinium macrocarpon HOM05D004221 ORTHO05D004998 6.1e-23 110.2 64 85.9
Actinidia04331 Actinidia chinensis HOM05D004221 ORTHO05D004998 8.0e-23 109.8 64 84.4
Actinidia04067 Actinidia chinensis HOM05D004221 ORTHO05D004998 1.0e-22 109.4 64 84.4
Haze_11779 Corylus avellana HOM05D004221 ORTHO05D004998 1.0e-22 109.4 64 84.4
Oeu013195.1 Olea europaea HOM05D004221 ORTHO05D004998 1.0e-22 109.4 64 84.4
AUR62017728 Chenopodium quinoa HOM05D004221 ORTHO05D004998 1.4e-22 109.0 64 84.4
AUR62032953 Chenopodium quinoa HOM05D004221 ORTHO05D004998 1.4e-22 109.0 64 84.4
Dinv17642 Davidia involucrata HOM05D004221 ORTHO05D004998 1.4e-22 109.0 64 85.9
Prupe.1G348800 Prunus persica HOM05D004221 ORTHO05D004998 1.4e-22 109.0 64 85.9
Potri.005G090100 Populus trichocarpa HOM05D004221 ORTHO05D004998 1.8e-22 108.6 64 81.2
SGA_v2.0_scaffold256G45657 Striga asiatica HOM05D004221 ORTHO05D004998 1.8e-22 108.6 64 82.8
CANSAT78G1084 Cannabis sativa HOM05D004221 ORTHO05D004998 2.3e-22 108.2 64 85.9
CiPaw.06G062100 Carya illinoinensis HOM05D004221 ORTHO05D004998 2.3e-22 108.2 64 82.8
Cfa008767 Carpinus fangiana HOM05D004221 ORTHO05D004998 3.0e-22 107.8 64 82.8
CDE02G2963 Ceratophyllum demersum HOM05D004221 ORTHO05D004998 3.0e-22 107.8 64 82.8
Ciclev10032992m.g Citrus clementina HOM05D004221 ORTHO05D004998 3.0e-22 107.8 64 84.4
Manes.11G108400 Manihot esculenta HOM05D004221 ORTHO05D004998 3.0e-22 107.8 64 82.8
AL2G24680 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 4.0e-22 107.5 64 84.4
AL8G16830 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 4.0e-22 107.5 64 84.4
SalBow2G0865 Salvia bowleyana HOM05D004221 ORTHO05D004998 4.0e-22 107.5 64 82.8
ATR0618G284 Amborella trichopoda HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 84.4
BcaB04g19880 Brassica carinata HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
BcaC04g23487 Brassica carinata HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
A06p34250 Brassica napus HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
C07p44270 Brassica napus HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
C09p07830 Brassica napus HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
BolC7t44950H Brassica oleracea HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
BolC9t53699H Brassica oleracea HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
BraA06t26357Z Brassica rapa HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
HanXRQChr04g0111871 Helianthus annuus HOM05D004221 ORTHO05D004998 5.2e-22 107.1 63 85.7
Lsat_1_v5_gn_4_64581 Lactuca sativa HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
MD16G1003800 Malus domestica HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
Rhsim09G0069500 Rhododendron simsii HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
TWI77G0364 Tripterygium wilfordii HOM05D004221 ORTHO05D004998 5.2e-22 107.1 64 82.8
ECA232G2799 Erigeron canadensis HOM05D004221 ORTHO05D004998 6.8e-22 106.7 64 82.8
FAN07G0046 Fragaria x ananassa HOM05D004221 ORTHO05D004998 6.8e-22 106.7 64 81.2
MD13G1003600 Malus domestica HOM05D004221 ORTHO05D004998 6.8e-22 106.7 64 82.8
MSTRG.13679 Avicennia marina HOM05D004221 ORTHO05D004998 8.9e-22 106.3 64 81.2
Migut.E00685 Erythranthe guttata HOM05D004221 ORTHO05D004998 8.9e-22 106.3 64 81.2
Aqoxy3G04291 Aquilegia oxysepala HOM05D004221 ORTHO05D004998 1.2e-21 105.9 63 84.1
Eucgr.J00883 Eucalyptus grandis HOM05D004221 ORTHO05D004998 1.2e-21 105.9 64 82.8
RcHm_v2.0_Chr1g0343381 Rosa chinensis HOM05D004221 ORTHO05D004998 1.2e-21 105.9 64 81.2
RcHm_v2.0_Chr2g0169341 Rosa chinensis HOM05D004221 ORTHO05D004998 1.2e-21 105.9 64 81.2
RcHm_v2.0_Chr4g0389221 Rosa chinensis HOM05D004221 ORTHO05D004998 1.2e-21 105.9 64 81.2
RcHm_v2.0_Chr6g0253901 Rosa chinensis HOM05D004221 ORTHO05D004998 1.2e-21 105.9 64 81.2
TAR629G0713 Trochodendron aralioides HOM05D004221 ORTHO05D004998 1.2e-21 105.9 64 84.4
EL10Ac9g22978 Beta vulgaris HOM05D004221 ORTHO05D004998 1.5e-21 105.5 64 81.2
AUR62032946 Chenopodium quinoa HOM05D004221 ORTHO05D004998 1.5e-21 105.5 64 81.2
Sp2g23860 Schrenkiella parvula HOM05D004221 ORTHO05D004998 1.5e-21 105.5 64 82.8
FvH4_4g37090 Fragaria vesca HOM05D004221 ORTHO05D004998 2.0e-21 105.1 64 79.7
FAN12G1261 Fragaria x ananassa HOM05D004221 ORTHO05D004998 2.0e-21 105.1 64 79.7
FAN17G0592 Fragaria x ananassa HOM05D004221 ORTHO05D004998 2.0e-21 105.1 64 79.7
Sabra07G0062100 Salix brachista HOM05D004221 ORTHO05D004998 2.0e-21 105.1 64 78.1
Duzib052G1226 Durio zibethinus HOM05D004221 ORTHO05D004998 2.6e-21 104.8 64 81.2
A09p07020 Brassica napus HOM05D004221 ORTHO05D004998 3.4e-21 104.4 64 81.2
BraA09t36350Z Brassica rapa HOM05D004221 ORTHO05D004998 3.4e-21 104.4 64 81.2
FAN03G0273 Fragaria x ananassa HOM05D004221 ORTHO05D004998 3.4e-21 104.4 64 78.1
FAN10G4155 Fragaria x ananassa HOM05D004221 ORTHO05D004998 3.4e-21 104.4 64 78.1
FAN23G3078 Fragaria x ananassa HOM05D004221 ORTHO05D004998 3.4e-21 104.4 64 78.1
Lalb_Chr06g0163921 Lupinus albus HOM05D004221 ORTHO05D004998 3.4e-21 104.4 64 81.2
TAR629G3528 Trochodendron aralioides HOM05D004221 ORTHO05D004998 4.4e-21 104.0 64 82.8
HPP92_005060 Vanilla planifolia HOM05D004221 ORTHO05D004998 4.4e-21 104.0 64 79.7
RcHm_v2.0_Chr4g0446851 Rosa chinensis HOM05D004221 ORTHO05D004998 5.7e-21 103.6 64 79.7
Potri.007G074042 Populus trichocarpa HOM05D004221 ORTHO05D004998 9.8e-21 102.8 64 75.0
RcHm_v2.0_Chr4g0391701 Rosa chinensis HOM05D004221 ORTHO05D004998 9.8e-21 102.8 64 79.7
RcHm_v2.0_Chr5g0070771 Rosa chinensis HOM05D004221 ORTHO05D004998 1.3e-20 102.4 64 78.1
SGA_v2.0_scaffold358G49836 Striga asiatica HOM05D004221 ORTHO05D004998 1.3e-20 102.4 64 78.1
FAN15G1018 Fragaria x ananassa HOM05D004221 ORTHO05D004998 1.7e-20 102.1 64 76.6
Atru.chr11.1114 Acer truncatum HOM05D004221 ORTHO05D004998 2.2e-20 101.7 64 79.7
RcHm_v2.0_Chr4g0391031 Rosa chinensis HOM05D004221 ORTHO05D004998 2.2e-20 101.7 64 78.1
RcHm_v2.0_Chr5g0039981 Rosa chinensis HOM05D004221 ORTHO05D004998 2.9e-20 101.3 64 78.1
Os10g0488100 Oryza sativa ssp. japonica HOM05D004221 ORTHO05D004998 3.7e-20 100.9 64 78.1
Sc26g0002050 Simmondsia chinensis HOM05D004221 ORTHO05D004998 4.9e-20 100.5 64 79.7
Zm00001eb045320 Zea mays HOM05D004221 ORTHO05D004998 4.9e-20 100.5 64 79.7
arahy.Tifrunner.gnm1.ann1.8BKN44 Arachis hypogaea HOM05D004221 ORTHO05D004998 6.4e-20 100.1 64 78.1
arahy.Tifrunner.gnm1.ann1.G8X8S8 Arachis hypogaea HOM05D004221 ORTHO05D004998 6.4e-20 100.1 64 78.1
arahy.Tifrunner.gnm1.ann1.VLL77W Arachis hypogaea HOM05D004221 ORTHO05D004998 6.4e-20 100.1 64 78.1
TWI74G0522 Tripterygium wilfordii HOM05D004221 ORTHO05D004998 6.4e-20 100.1 64 78.1
FAN07G1220 Fragaria x ananassa HOM05D004221 ORTHO05D004998 1.1e-19 99.4 64 75.0
Lj9A327T34 Lonicera japonica HOM05D004221 ORTHO05D004998 4.1e-19 97.4 63 79.4
Lj5g0004809 Lotus japonicus HOM05D004221 ORTHO05D004998 9.2e-19 96.3 64 73.4
unitig_699.g19553 Utricularia gibba HOM05D004221 ORTHO05D004998 1.2e-18 95.9 70 71.4
FAN03G3278 Fragaria x ananassa HOM05D004221 ORTHO05D004998 1.6e-18 95.5 59 76.3
CDE04G0710 Ceratophyllum demersum HOM05D004221 ORTHO05D004998 2.0e-18 95.1 74 68.9
Glyma.20G103300 Glycine max HOM05D004221 ORTHO05D004998 2.0e-18 95.1 64 75.0
FAN10G1077 Fragaria x ananassa HOM05D004221 ORTHO05D004998 2.7e-18 94.7 59 74.6
Glyma.10G286000 Glycine max HOM05D004221 ORTHO05D004998 4.6e-18 94.0 64 73.4
FAN17G2528 Fragaria x ananassa HOM05D004221 ORTHO05D004998 7.8e-18 93.2 59 74.6
Oeu041209.1 Olea europaea HOM05D004221 ORTHO05D004998 7.8e-18 93.2 64 76.6
MBI06_g27498_MAGBIO Magnolia biondii HOM05D004221 ORTHO05D004998 1.3e-17 92.4 64 78.1
RcHm_v2.0_Chr5g0067401 Rosa chinensis HOM05D004221 ORTHO05D004998 3.9e-17 90.9 53 83.0
RcHm_v2.0_Chr6g0266371 Rosa chinensis HOM05D004221 ORTHO05D004998 3.9e-17 90.9 53 83.0
RcHm_v2.0_Chr3g0478071 Rosa chinensis HOM05D004221 ORTHO05D004998 8.6e-17 89.7 53 83.0
SEGI_18337 Sequoiadendron giganteum HOM05D004221 ORTHO05D004998 1.5e-16 89.0 63 71.4
VMungo0720G0328 Vigna mungo HOM05D004221 ORTHO05D004998 2.5e-16 88.2 64 67.2
Phvul.007G014900 Phaseolus vulgaris HOM05D004221 ORTHO05D004998 3.3e-16 87.8 64 68.8
Medtr1g114500 Medicago truncatula HOM05D004221 ORTHO05D004998 5.6e-16 87.0 64 68.8
Sabra05G0074200 Salix brachista HOM05D004221 ORTHO05D004998 5.6e-16 87.0 104 49.0
SHI21211 Sapria himalayana HOM05D004221 ORTHO05D004998 1.2e-15 85.9 69 62.3
Ca_11255_v3 Cicer arietinum L. HOM05D004221 ORTHO05D004998 1.6e-15 85.5 64 68.8
Psat6g233960 Pisum sativum HOM05D004221 ORTHO05D004998 1.6e-15 85.5 64 67.2
TPR.G4058 Trifolium pratense HOM05D004221 ORTHO05D004998 1.6e-15 85.5 64 68.8
SMO114G0084 Selaginella moellendorffii HOM05D004221 ORTHO05D004998 4.7e-15 84.0 63 61.9
Pp3c1_32320 Physcomitrium patens HOM05D004221 ORTHO05D004998 6.8e-14 80.1 63 65.1
AagrBONN_evm.TU.Sc2ySwM_117.4013 Anthoceros agrestis HOM05D004221 ORTHO05D004998 1.5e-13 79.0 63 60.3
RcHm_v2.0_Chr6g0274601 Rosa chinensis HOM05D004221 ORTHO05D004998 1.5e-13 79.0 47 83.0
Mapoly0041s0007 Marchantia polymorpha HOM05D004221 ORTHO05D004998 2.0e-13 78.6 63 58.7
TAR371G0536 Trochodendron aralioides HOM05D004221 ORTHO05D004998 4.9e-12 73.9 64 64.1
Peaxi162Scf00021g02223 Petunia axillaris HOM05D004221 ORTHO05D004998 1.3e-09 65.9 64 60.9
CBR_g19844 Chara braunii HOM05D002142 ORTHO05D001189 8.6e-09 63.2 63 52.4
SalBow6G4331 Salvia bowleyana HOM05D004221 ORTHO05D004998 4.3e-08 60.8 41 70.7
Sed0018067 Sechium edule HOM05D004221 ORTHO05D004998 1.2e-07 59.3 38 81.6
MBI19_g31737_MAGBIO Magnolia biondii HOM05D004221 ORTHO05D004998 4.7e-07 57.4 43 69.8
MBI19_g48155_MAGBIO Magnolia biondii HOM05D004221 ORTHO05D004998 4.7e-07 57.4 43 69.8
MCO07G569 Micromonas commoda HOM05D004221 ORTHO05D004998 1.1e-06 56.2 63 44.4
SEGI_37490 Sequoiadendron giganteum HOM05D004221 ORTHO05D004998 5.2e-06 53.9 28 89.3


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