Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033723.2 Cucumis melo HOM05D002366 ORTHO05D002499 2.0e-53 212.2 114 100.0
MELO3C033579.2 Cucumis melo HOM05D002366 ORTHO05D002499 4.4e-32 141.4 94 83.0
CsaV3_5G026560 Cucumis sativus L. HOM05D002366 ORTHO05D002499 4.4e-32 141.4 95 82.1
CsaV3_5G026550 Cucumis sativus L. HOM05D002366 ORTHO05D002499 1.1e-30 136.7 94 78.7
ClCG09G019900 Citrullus lanatus HOM05D002366 ORTHO05D002499 1.6e-26 122.9 94 74.5
Sed0005662 Sechium edule HOM05D002366 ORTHO05D002499 1.6e-21 106.3 93 63.4
Sed0019419 Sechium edule HOM05D002366 ORTHO05D002499 4.5e-16 88.2 92 53.3
MELO3C021643.2 Cucumis melo HOM05D002366 ORTHO05D002499 2.7e-13 79.0 93 45.2
CsaV3_5G026540 Cucumis sativus L. HOM05D002366 ORTHO05D002499 2.3e-12 75.9 93 47.3
MELO3C021645.2 Cucumis melo HOM05D002366 ORTHO05D002499 3.0e-12 75.5 93 46.2
CsaV3_5G026570 Cucumis sativus L. HOM05D002366 ORTHO05D002499 3.9e-12 75.1 93 43.0
Prupe.2G233700 Prunus persica HOM05D002366 ORTHO05D002499 5.1e-12 74.7 101 44.6
Sed0020714 Sechium edule HOM05D002366 ORTHO05D002499 5.1e-12 74.7 93 45.2
RcHm_v2.0_Chr1g0366551 Rosa chinensis HOM05D002366 ORTHO05D002499 7.4e-11 70.9 95 45.3
Sed0023282 Sechium edule HOM05D002366 ORTHO05D002499 6.2e-10 67.8 93 40.9
Prupe.2G233900 Prunus persica HOM05D002366 ORTHO05D002499 1.8e-09 66.2 93 39.8
Nitab4.5_0005964g0040 Nicotiana tabacum HOM05D002366 ORTHO05D002499 2.4e-09 65.9 84 46.4
Prupe.2G233800 Prunus persica HOM05D002366 ORTHO05D002499 5.3e-09 64.7 93 38.7
Sed0022735 Sechium edule HOM05D002366 ORTHO05D002499 9.0e-09 63.9 93 38.7
CAN.G786.13 Capsicum annuum HOM05D002366 ORTHO05D002499 1.2e-08 63.5 90 46.7
Sopen04g005660 Solanum pennellii HOM05D002366 ORTHO05D002499 1.2e-08 63.5 89 47.2
CANSAT56G4267 Cannabis sativa HOM05D002366 ORTHO05D002499 1.5e-08 63.2 100 36.0
Oeu048250.1 Olea europaea HOM05D002366 ORTHO05D002499 1.5e-08 63.2 78 48.7
PGSC0003DMG400027749 Solanum tuberosum HOM05D002366 ORTHO05D002499 1.5e-08 63.2 89 46.1
Haze_17057 Corylus avellana HOM05D002366 ORTHO05D002499 2.0e-08 62.8 74 44.6
Dinv26005 Davidia involucrata HOM05D002366 ORTHO05D002499 2.0e-08 62.8 104 41.3
Sabra10G0158200 Salix brachista HOM05D002366 ORTHO05D002499 2.0e-08 62.8 93 40.9
FvH4_7g22200 Fragaria vesca HOM05D002366 ORTHO05D002499 2.6e-08 62.4 93 40.9
FAN03G1080 Fragaria x ananassa HOM05D002366 ORTHO05D002499 2.6e-08 62.4 93 40.9
FAN06G1701 Fragaria x ananassa HOM05D002366 ORTHO05D002499 2.6e-08 62.4 93 40.9
CSS0010618 Camellia sinensis var. sinensis HOM05D002366 ORTHO05D002499 3.4e-08 62.0 73 46.6
GSVIVG01016541001 Vitis vinifera HOM05D002366 ORTHO05D002499 3.4e-08 62.0 103 40.8
Cc02_g07950 Coffea canephora HOM05D002366 ORTHO05D002499 4.5e-08 61.6 88 42.0
FAN01G2158 Fragaria x ananassa HOM05D002366 ORTHO05D002499 5.8e-08 61.2 93 39.8
Solyc04g011480.3 Solanum lycopersicum HOM05D002366 ORTHO05D002499 7.6e-08 60.8 89 46.1
CANSAT56G2475 Cannabis sativa HOM05D002366 ORTHO05D002499 1.3e-07 60.1 100 35.0
Sed0024270 Sechium edule HOM05D002366 ORTHO05D002499 2.2e-07 59.3 86 39.5
VMungo1383G2148 Vigna mungo HOM05D002366 ORTHO05D002499 2.9e-07 58.9 93 39.8
Sabra10G0158300 Salix brachista HOM05D002366 ORTHO05D002499 4.9e-07 58.2 93 39.8
Thecc.03G067200 Theobroma cacao HOM05D002366 ORTHO05D002499 4.9e-07 58.2 82 42.7
ClCG09G019910 Citrullus lanatus HOM05D002366 ORTHO05D002499 6.4e-07 57.8 116 34.5
Thecc.10G043700 Theobroma cacao HOM05D002366 ORTHO05D002499 6.4e-07 57.8 74 39.2
MSTRG.8245 Avicennia marina HOM05D002366 ORTHO05D002499 8.4e-07 57.4 78 43.6
Peaxi162Scf00760g00218 Petunia axillaris HOM05D002366 ORTHO05D002499 8.4e-07 57.4 89 43.8
Sopen04g005670 Solanum pennellii HOM05D002366 ORTHO05D002499 8.4e-07 57.4 90 43.3
PGSC0003DMG400027748 Solanum tuberosum HOM05D002366 ORTHO05D002499 8.4e-07 57.4 90 43.3
Eucgr.G02924 Eucalyptus grandis HOM05D002366 ORTHO05D002499 1.1e-06 57.0 99 36.4
Oeu021438.1 Olea europaea HOM05D002366 ORTHO05D002499 1.1e-06 57.0 83 41.0
Solyc04g011490.4 Solanum lycopersicum HOM05D002366 ORTHO05D002499 1.1e-06 57.0 90 43.3
Ca_07285_v3 Cicer arietinum L. HOM05D002366 ORTHO05D002499 1.9e-06 56.2 67 40.3
Dinv15677 Davidia involucrata HOM05D002366 ORTHO05D002499 1.9e-06 56.2 82 40.2
Manes.17G090200 Manihot esculenta HOM05D002366 ORTHO05D002499 1.9e-06 56.2 96 38.5
Peaxi162Scf00760g00219 Petunia axillaris HOM05D002366 ORTHO05D002499 1.9e-06 56.2 88 46.6
BcaC02g07399 Brassica carinata HOM05D002366 ORTHO05D002499 4.2e-06 55.1 75 42.7
A04p30420 Brassica napus HOM05D002366 ORTHO05D002499 4.2e-06 55.1 75 42.7
C04p67400 Brassica napus HOM05D002366 ORTHO05D002499 4.2e-06 55.1 75 42.7
ClCG04G012730 Citrullus lanatus HOM05D002366 ORTHO05D002499 4.2e-06 55.1 98 35.7
Duzib205G0226 Durio zibethinus HOM05D002366 ORTHO05D002499 4.2e-06 55.1 82 41.5
DCAR_027633 Daucus carota HOM05D002366 ORTHO05D002499 5.5e-06 54.7 92 39.1
Glyma.02G092500 Glycine max HOM05D002366 ORTHO05D002499 5.5e-06 54.7 98 34.7
SalBow6G6566 Salvia bowleyana HOM05D002366 ORTHO05D002499 5.5e-06 54.7 76 42.1
Dinv20495 Davidia involucrata HOM05D002366 ORTHO05D002499 7.1e-06 54.3 106 33.0
SalBow6G5537 Salvia bowleyana HOM05D002366 ORTHO05D002499 9.3e-06 53.9 85 41.2
TWI74G0850 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 9.3e-06 53.9 78 42.3
GSVIVG01016540001 Vitis vinifera HOM05D002366 ORTHO05D002499 9.3e-06 53.9 71 45.1


User provided reference genes

Program Settings