Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033702.2 Cucumis melo HOM05D007860 ORTHO05D009950 1.0e-27 125.9 61 100.0
CsaV3_5G026630 Cucumis sativus L. HOM05D007860 ORTHO05D009950 6.9e-24 113.2 62 90.3
Sed0021911 Sechium edule HOM05D007860 ORTHO05D009950 1.7e-22 108.6 59 86.4
Aqoxy4G02946 Aquilegia oxysepala HOM05D007860 ORTHO05D009950 1.1e-16 89.4 53 75.5
ClCG09G019790 Citrullus lanatus HOM05D007860 ORTHO05D009950 1.8e-16 88.6 44 93.2
Phvul.008G011200 Phaseolus vulgaris HOM05D007860 ORTHO05D009950 1.8e-16 88.6 57 71.9
Glyma.18G290700 Glycine max HOM05D007860 ORTHO05D009950 3.1e-16 87.8 57 70.2
TPR.G1333 Trifolium pratense HOM05D007860 ORTHO05D009950 9.0e-16 86.3 57 68.4
RcHm_v2.0_Chr4g0445811 Rosa chinensis HOM05D007860 ORTHO05D009950 1.2e-15 85.9 58 67.2
Cfa009596 Carpinus fangiana HOM05D007860 ORTHO05D009950 1.5e-15 85.5 59 69.5
Glyma.02G092000 Glycine max HOM05D007860 ORTHO05D009950 3.4e-15 84.3 57 66.7
Lalb_Chr11g0073451 Lupinus albus HOM05D007860 ORTHO05D009950 3.4e-15 84.3 56 69.6
Hund16092 Selenicereus undatus HOM05D007860 ORTHO05D009950 3.4e-15 84.3 58 69.0
Thecc.10G043200 Theobroma cacao HOM05D007860 ORTHO05D009950 4.5e-15 84.0 59 62.7
Prupe.1G341800 Prunus persica HOM05D007860 ORTHO05D009950 7.7e-15 83.2 49 77.6
Gohir.D04G062700 Gossypium hirsutum HOM05D007860 ORTHO05D009950 1.3e-14 82.4 57 64.9
Gorai.012G070100 Gossypium raimondii HOM05D007860 ORTHO05D009950 1.3e-14 82.4 57 64.9
Potri.010G204200 Populus trichocarpa HOM05D007860 ORTHO05D009950 1.3e-14 82.4 57 64.9
Medtr7g026210 Medicago truncatula HOM05D007860 ORTHO05D009950 2.2e-14 81.6 57 68.4
CiPaw.01G286200 Carya illinoinensis HOM05D007860 ORTHO05D009950 2.9e-14 81.3 59 62.7
CDE08G0617 Ceratophyllum demersum HOM05D007860 ORTHO05D009950 2.9e-14 81.3 53 69.8
Cc00_g31060 Coffea canephora HOM05D007860 ORTHO05D009950 2.9e-14 81.3 60 60.0
Gohir.A05G349600 Gossypium hirsutum HOM05D007860 ORTHO05D009950 2.9e-14 81.3 57 64.9
vmacro04194 Vaccinium macrocarpon HOM05D007860 ORTHO05D009950 2.9e-14 81.3 59 64.4
Manes.09G185000 Manihot esculenta HOM05D007860 ORTHO05D009950 3.8e-14 80.9 59 62.7
Sabra10G0157800 Salix brachista HOM05D007860 ORTHO05D009950 5.0e-14 80.5 57 61.4
SalBow8G2293 Salvia bowleyana HOM05D007860 ORTHO05D009950 5.0e-14 80.5 47 78.7
TWI63G0334 Tripterygium wilfordii HOM05D007860 ORTHO05D009950 5.0e-14 80.5 59 66.1
Lj1g0016082 Lotus japonicus HOM05D007860 ORTHO05D009950 6.5e-14 80.1 57 66.7
Cc02_g07910 Coffea canephora HOM05D007860 ORTHO05D009950 8.5e-14 79.7 60 58.3
Solyc04g150108.1 Solanum lycopersicum HOM05D007860 ORTHO05D009950 8.5e-14 79.7 58 63.8
PGSC0003DMG400027747 Solanum tuberosum HOM05D007860 ORTHO05D009950 8.5e-14 79.7 58 63.8
CAN.G786.12 Capsicum annuum HOM05D007860 ORTHO05D009950 1.4e-13 79.0 58 63.8
CiPaw.01G285600 Carya illinoinensis HOM05D007860 ORTHO05D009950 1.4e-13 79.0 57 63.2
Gohir.A07G000500 Gossypium hirsutum HOM05D007860 ORTHO05D009950 1.4e-13 79.0 57 61.4
HPP92_012590 Vanilla planifolia HOM05D007860 ORTHO05D009950 1.4e-13 79.0 48 72.9
Nn4g22694 Nelumbo nucifera HOM05D007860 ORTHO05D009950 1.9e-13 78.6 59 64.4
Peaxi162Scf00760g00224 Petunia axillaris HOM05D007860 ORTHO05D009950 4.2e-13 77.4 58 58.6
DCAR_011692 Daucus carota HOM05D007860 ORTHO05D009950 7.2e-13 76.6 59 62.7
Aa31LG3G410 Aethionema arabicum HOM05D007860 ORTHO05D009950 9.4e-13 76.3 57 63.2
COL.COLO4_15031 Corchorus olitorius HOM05D007860 ORTHO05D009950 1.2e-12 75.9 57 63.2
Lalb_Chr10g0091671 Lupinus albus HOM05D007860 ORTHO05D009950 2.1e-12 75.1 54 66.7
unitig_747.g21379 Utricularia gibba HOM05D007860 ORTHO05D009950 2.1e-12 75.1 51 64.7
THA.LOC104817766 Tarenaya hassleriana HOM05D007860 ORTHO05D009950 3.6e-12 74.3 58 62.1
Zm00001eb205410 Zea mays HOM05D007860 ORTHO05D009950 3.6e-12 74.3 49 65.3
Migut.E01407 Erythranthe guttata HOM05D007860 ORTHO05D009950 4.6e-12 73.9 47 70.2
Migut.E01421 Erythranthe guttata HOM05D007860 ORTHO05D009950 4.6e-12 73.9 47 70.2
HanXRQChr08g0220681 Helianthus annuus HOM05D007860 ORTHO05D009950 6.1e-12 73.6 59 61.0
VMungo1383G1282 Vigna mungo HOM05D007860 ORTHO05D009950 7.9e-12 73.2 45 75.6
AT4G26055 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 1.0e-11 72.8 58 60.3
Lsat_1_v5_gn_8_15760 Lactuca sativa HOM05D007860 ORTHO05D009950 1.0e-11 72.8 59 59.3
Psat3g182840 Pisum sativum HOM05D007860 ORTHO05D009950 2.3e-11 71.6 43 74.4
Sc10g0001510 Simmondsia chinensis HOM05D007860 ORTHO05D009950 2.3e-11 71.6 43 79.1
Carub.0007s1490 Capsella rubella HOM05D007860 ORTHO05D009950 3.9e-11 70.9 50 66.0
Nn3g16785 Nelumbo nucifera HOM05D007860 ORTHO05D009950 3.9e-11 70.9 56 53.6
Thhalv10026736m.g Eutrema salsugineum HOM05D007860 ORTHO05D009950 6.7e-11 70.1 58 63.8
MBI05_g22876_MAGBIO Magnolia biondii HOM05D007860 ORTHO05D009950 6.7e-11 70.1 50 62.0
Sp6g18800 Schrenkiella parvula HOM05D007860 ORTHO05D009950 6.7e-11 70.1 51 64.7
MD16G1008700 Malus domestica HOM05D007860 ORTHO05D009950 8.8e-11 69.7 43 72.1
BcaB01g04442 Brassica carinata HOM05D007860 ORTHO05D009950 2.0e-10 68.6 51 62.7
BraA03t10609Z Brassica rapa HOM05D007860 ORTHO05D009950 2.0e-10 68.6 58 58.6
SpUn0576_0010 Schrenkiella parvula HOM05D007860 ORTHO05D009950 2.6e-10 68.2 63 57.1
AT5G57080 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 3.3e-10 67.8 53 58.5
Oeu017367.1 Olea europaea HOM05D007860 ORTHO05D009950 4.4e-10 67.4 57 56.1
PSO170G0009 Papaver somniferum HOM05D007860 ORTHO05D009950 4.4e-10 67.4 61 59.0
BcaC07g38219 Brassica carinata HOM05D007860 ORTHO05D009950 5.7e-10 67.0 58 56.9
A08p20930 Brassica napus HOM05D007860 ORTHO05D009950 5.7e-10 67.0 58 56.9
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 5.7e-10 67.0 58 56.9
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 5.7e-10 67.0 58 56.9
BraA08t34046Z Brassica rapa HOM05D007860 ORTHO05D009950 5.7e-10 67.0 58 56.9
AL7G26930 Arabidopsis lyrata HOM05D007860 ORTHO05D009950 7.4e-10 66.6 50 66.0
CSS0034636 Camellia sinensis var. sinensis HOM05D007860 ORTHO05D009950 7.4e-10 66.6 43 72.1
arahy.Tifrunner.gnm1.ann1.WKZY2Y Arachis hypogaea HOM05D007860 ORTHO05D009950 9.7e-10 66.2 42 71.4
CARHR233560 Cardamine hirsuta HOM05D007860 ORTHO05D009950 1.3e-09 65.9 58 58.6
Actinidia13876 Actinidia chinensis HOM05D007860 ORTHO05D009950 1.7e-09 65.5 45 62.2
FAN22G0325 Fragaria x ananassa HOM05D007860 ORTHO05D009950 1.7e-09 65.5 59 55.9
A03p56460 Brassica napus HOM05D002589 ORTHO05D002742 4.8e-09 63.9 58 53.4
C07p54670 Brassica napus HOM05D007860 ORTHO05D009950 4.8e-09 63.9 58 55.2
BolC7t45956H Brassica oleracea HOM05D007860 ORTHO05D009950 4.8e-09 63.9 58 55.2
BraA03t14716Z Brassica rapa HOM05D007860 ORTHO05D009950 4.8e-09 63.9 58 53.4
BcaNung07291 Brassica carinata HOM05D007860 ORTHO05D009950 1.4e-08 62.4 51 60.8
EL10Ac2g04657 Beta vulgaris HOM05D007860 ORTHO05D009950 3.1e-08 61.2 47 63.8
Ciclev10033443m.g Citrus clementina HOM05D007860 ORTHO05D009950 5.3e-08 60.5 45 64.4
SEGI_33557 Sequoiadendron giganteum HOM05D007860 ORTHO05D009950 9.1e-08 59.7 65 49.2


User provided reference genes

Program Settings