Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.5e-107 391.0 194 100.0
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-75 286.6 167 86.8
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.1e-74 281.2 172 84.9
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.8e-56 220.7 167 70.1
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-41 172.2 94 87.2
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 2.5e-35 152.9 168 48.8
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.1e-33 146.0 179 42.5
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.4e-32 142.5 188 41.0
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.9e-31 138.7 168 45.2
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.1e-30 137.5 169 45.0
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 4.1e-30 135.6 172 44.2
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 4.1e-30 135.6 165 44.2
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-27 127.1 163 41.1
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.6e-26 123.6 179 40.8
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.1e-26 121.3 151 41.7
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.4e-24 115.5 179 38.5
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.8e-23 112.5 168 38.7
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-22 109.8 165 35.8
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 7.1e-22 108.2 158 36.7
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 2.3e-20 103.2 88 62.5
ClCG02G006040 Citrullus lanatus HOM05D007314 ORTHO05D003768 5.1e-20 102.1 73 69.9
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-19 100.9 171 35.1
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 4.3e-19 99.0 53 81.1
Sed0010248 Sechium edule HOM05D007314 ORTHO05D003768 9.6e-19 97.8 83 62.7
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.6e-18 95.9 102 49.0
Sed0017732 Sechium edule HOM05D007314 ORTHO05D003768 4.7e-18 95.5 72 66.7
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-17 93.2 58 63.8
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.9e-16 87.8 103 46.6
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.9e-15 86.3 47 74.5
MELO3C031186.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.4e-15 85.1 141 38.3
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 1.9e-14 83.6 186 36.6
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.2e-14 82.8 51 64.7
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.2e-14 82.8 184 33.7
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.2e-14 82.4 51 62.7
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 5.4e-14 82.0 56 62.5
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.1e-14 81.6 174 33.3
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-13 80.9 134 39.6
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 6.0e-13 78.6 164 32.3
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 7.8e-13 78.2 157 32.5
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 7.8e-13 78.2 53 62.3
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.0e-12 77.8 178 30.9
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 1.0e-12 77.8 56 60.7
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.0e-12 77.8 58 56.9
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 3.0e-12 76.3 150 37.3
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 3.0e-12 76.3 133 35.3
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.6e-12 75.1 41 68.3
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.6e-12 75.1 155 31.0
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 1.1e-11 74.3 154 34.4
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-11 73.9 51 56.9
MELO3C034314.2 Cucumis melo HOM05D007314 ORTHO05D167746 2.5e-11 73.2 106 47.2
FAN19G0969 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.5e-11 73.2 155 31.0
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.5e-11 73.2 233 27.0
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.3e-11 72.4 103 40.8
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 7.3e-11 71.6 182 29.1
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 9.6e-11 71.2 56 51.8
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.3e-10 70.9 156 32.1
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 1.3e-10 70.9 148 30.4
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 2.1e-10 70.1 100 38.0
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-10 69.7 129 32.6
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-10 69.7 48 58.3
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 2.8e-10 69.7 210 27.6
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.8e-10 68.9 34 85.3
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 6.2e-10 68.6 33 84.8
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 8.1e-10 68.2 206 27.7
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 3.1e-09 66.2 182 32.4
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 5.3e-09 65.5 156 31.4
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 6.9e-09 65.1 164 30.5
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.9e-09 65.1 169 32.0
ClCG08G004820 Citrullus lanatus HOM05D007314 ORTHO05D003768 9.0e-09 64.7 82 43.9
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 4.5e-08 62.4 211 26.5
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 1.3e-07 60.8 196 27.6
MELO3C034299.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.7e-07 60.5 103 36.9
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.9e-07 59.7 184 29.3
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 4.9e-07 58.9 172 29.1
ClCG10G008410 Citrullus lanatus HOM05D007314 ORTHO05D003768 6.4e-07 58.5 75 42.7
MELO3C019328.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.4e-07 58.5 130 34.6
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 8.4e-07 58.2 61 41.0
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 8.4e-07 58.2 51 45.1
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 8.4e-07 58.2 218 25.2
FvH4_4g15580 Fragaria vesca HOM05D003127 ORTHO05D003768 1.1e-06 57.8 143 30.1
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-06 57.8 173 26.6
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 1.9e-06 57.0 38 65.8
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 2.4e-06 56.6 157 28.0
Sed0016549 Sechium edule HOM05D007314 ORTHO05D003768 2.4e-06 56.6 71 45.1
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 3.2e-06 56.2 45 46.7
MELO3C032011.2 Cucumis melo HOM05D011747 ORTHO05D014199 3.2e-06 56.2 80 33.8
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 3.2e-06 56.2 175 28.6
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 4.2e-06 55.8 172 28.5
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 5.4e-06 55.5 46 52.2
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 5.4e-06 55.5 98 38.8
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 7.1e-06 55.1 146 28.8


User provided reference genes

Program Settings