Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033597.2 Cucumis melo HOM05D002881 ORTHO05D002983 3.2e-53 211.5 105 100.0
MELO3C025327.2 Cucumis melo HOM05D002881 ORTHO05D002983 5.3e-48 194.1 103 92.2
MELO3C032930.2 Cucumis melo HOM05D002881 ORTHO05D002983 3.8e-46 188.0 103 88.3
MELO3C028745.2 Cucumis melo HOM05D002881 ORTHO05D002983 1.6e-44 182.6 103 86.4
MELO3C034687.2 Cucumis melo HOM05D002881 ORTHO05D002983 3.6e-36 154.8 79 92.4
MELO3C034570.2 Cucumis melo HOM05D002881 ORTHO05D002983 2.3e-35 152.1 83 86.7
MELO3C034633.2 Cucumis melo HOM05D002881 ORTHO05D002983 2.3e-27 125.6 65 89.2
MELO3C030472.2 Cucumis melo HOM05D002881 ORTHO05D002983 1.7e-25 119.4 66 89.4
MELO3C031681.2 Cucumis melo HOM05D002881 ORTHO05D002983 2.8e-25 118.6 68 83.8
MELO3C031109.2 Cucumis melo HOM05D002881 ORTHO05D002983 1.8e-24 115.9 66 83.3
Sed0006040 Sechium edule HOM05D002881 ORTHO05D010329 2.8e-17 92.0 100 47.0
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 1.1e-13 80.1 98 39.8
Thecc.05G210100 Theobroma cacao HOM05D002881 ORTHO05D002983 5.5e-13 77.8 98 38.8
Thecc.05G072600 Theobroma cacao HOM05D002881 ORTHO05D002983 8.0e-12 73.9 98 38.8
Thecc.07G158600 Theobroma cacao HOM05D002881 ORTHO05D002983 1.8e-11 72.8 84 40.5
Thecc.04G051200 Theobroma cacao HOM05D002881 ORTHO05D002983 2.3e-11 72.4 98 37.8
Thecc.07G191800 Theobroma cacao HOM05D002881 ORTHO05D002983 2.3e-11 72.4 98 37.8
Ca_07212_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.2e-10 70.1 65 46.2
TWI56G0801 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 1.2e-10 70.1 97 38.1
CsaV3_1G030040 Cucumis sativus L. HOM05D002881 ORTHO05D002983 1.5e-10 69.7 46 67.4
Ca_18459_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 3.4e-10 68.6 65 44.6
Medtr5g081070 Medicago truncatula HOM05D002881 ORTHO05D002983 3.4e-10 68.6 103 31.1
Thecc.02G286200 Theobroma cacao HOM05D002881 ORTHO05D002983 4.4e-10 68.2 98 35.7
Ca_13846_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 5.7e-10 67.8 65 43.1
Medtr6g072130 Medicago truncatula HOM05D002881 ORTHO05D002983 5.7e-10 67.8 63 47.6
Ca_26004_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 7.5e-10 67.4 65 44.6
Ca_14824_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.3e-09 66.6 65 44.6
Gohir.D12G068401 Gossypium hirsutum HOM05D002881 ORTHO05D002983 1.3e-09 66.6 57 43.9
TWI23G0459 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 2.2e-09 65.9 94 37.2
Ca_12497_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 2.8e-09 65.5 70 41.4
Ca_19273_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 4.9e-09 64.7 65 43.1
Ca_19521_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 4.9e-09 64.7 57 49.1
Ca_24154_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 4.9e-09 64.7 70 38.6
Ca_07643_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.1e-08 63.5 65 40.0
Ca_03314_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.4e-08 63.2 65 40.0
ClCG08G006720 Citrullus lanatus HOM05D005793 ORTHO05D010329 2.4e-08 62.4 95 32.6
Ca_22556_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 3.1e-08 62.0 100 36.0
Ca_23936_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 4.1e-08 61.6 70 41.4
Ca_27297_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.2e-07 60.1 66 40.9
Gorai.001G080800 Gossypium raimondii HOM05D002881 ORTHO05D002983 1.2e-07 60.1 92 35.9
Gohir.D01G148150 Gossypium hirsutum HOM05D002881 ORTHO05D002983 2.0e-07 59.3 85 32.9
Medtr6g084020 Medicago truncatula HOM05D002881 ORTHO05D002983 2.0e-07 59.3 99 27.3
Gorai.010G121200 Gossypium raimondii HOM05D002881 ORTHO05D002983 3.5e-07 58.5 57 42.1
COL.COLO4_03287 Corchorus olitorius HOM05D015028 ORTHO05D002983 4.5e-07 58.2 97 30.9
Gorai.010G160500 Gossypium raimondii HOM05D002881 ORTHO05D002983 4.5e-07 58.2 57 38.6
Medtr2g082450 Medicago truncatula HOM05D002881 ORTHO05D002983 4.5e-07 58.2 61 39.3
Medtr6g074500 Medicago truncatula HOM05D002881 ORTHO05D002983 4.5e-07 58.2 61 39.3
Medtr5g046540 Medicago truncatula HOM05D002881 ORTHO05D002983 5.9e-07 57.8 61 41.0
TPR.G35764 Trifolium pratense HOM05D002881 ORTHO05D002983 5.9e-07 57.8 62 43.5
Medtr8g054530 Medicago truncatula HOM05D002881 ORTHO05D002983 7.7e-07 57.4 61 41.0
Ca_27196_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.0e-06 57.0 62 41.9
TPR.G23480 Trifolium pratense HOM05D002881 ORTHO05D002983 1.3e-06 56.6 58 43.1
Medtr2g049380 Medicago truncatula HOM05D002881 ORTHO05D002983 3.8e-06 55.1 64 35.9
Medtr0029s0060 Medicago truncatula HOM05D002881 ORTHO05D002983 5.0e-06 54.7 57 42.1
Medtr5g028560 Medicago truncatula HOM05D002881 ORTHO05D002983 5.0e-06 54.7 57 42.1
TPR.G14977 Trifolium pratense HOM05D002881 ORTHO05D002983 5.0e-06 54.7 53 43.4
Ca_22303_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 6.6e-06 54.3 94 31.9
Gohir.A04G057152 Gossypium hirsutum HOM05D002881 ORTHO05D002983 6.6e-06 54.3 53 37.7
Medtr3g020590 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr5g015640 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr5g040810 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr5g074255 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr5g084310 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr5g085650 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr6g027000 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr7g028120 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr7g046110 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 58 37.9
Medtr7g079940 Medicago truncatula HOM05D002881 ORTHO05D002983 6.6e-06 54.3 57 42.1
Medtr1g018990 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 57 42.1
Medtr3g013580 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 58 37.9
Medtr3g051650 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 58 37.9
Medtr3g067340 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 58 37.9
Medtr3g082580 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 57 42.1
Medtr3g100770 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 57 42.1
Medtr4g039657 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 57 40.4
Medtr5g036210 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 57 42.1
Medtr5g080530 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 58 37.9
Medtr7g006680 Medicago truncatula HOM05D002881 ORTHO05D002983 8.6e-06 53.9 58 37.9


User provided reference genes

Program Settings