Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033570.2 Cucumis melo HOM05D002824 ORTHO05D007162 5.6e-26 120.2 60 100.0
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 3.6e-17 90.9 58 82.8
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 3.1e-16 87.8 60 80.0
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.4e-15 84.0 60 75.0
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 5.8e-15 83.6 60 76.7
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 9.8e-15 82.8 60 76.7
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.8e-15 82.8 60 76.7
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.7e-14 82.0 58 77.6
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 1.7e-14 82.0 60 75.0
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 2.9e-14 81.3 60 75.0
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 2.9e-14 81.3 60 75.0
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 2.9e-14 81.3 60 75.0
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 2.9e-14 81.3 60 75.0
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 2.9e-14 81.3 60 75.0
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 2.9e-14 81.3 60 75.0
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 2.9e-14 81.3 60 75.0
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 3.7e-14 80.9 60 73.3
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 4.9e-14 80.5 60 73.3
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 4.9e-14 80.5 58 77.6
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 4.9e-14 80.5 58 77.6
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.9e-14 80.5 60 75.0
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 4.9e-14 80.5 60 73.3
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 4.9e-14 80.5 60 73.3
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 6.4e-14 80.1 60 73.3
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 8.3e-14 79.7 60 73.3
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 8.3e-14 79.7 60 73.3
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 8.3e-14 79.7 60 73.3
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 8.3e-14 79.7 60 73.3
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 8.3e-14 79.7 60 73.3
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 8.3e-14 79.7 60 75.0
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 1.1e-13 79.3 60 73.3
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 1.1e-13 79.3 60 73.3
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 1.1e-13 79.3 60 71.7
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.1e-13 79.3 60 73.3
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.1e-13 79.3 60 73.3
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.1e-13 79.3 60 73.3
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 1.4e-13 79.0 60 71.7
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 3.2e-13 77.8 60 71.7
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 3.2e-13 77.8 60 71.7
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 3.2e-13 77.8 60 71.7
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 3.2e-13 77.8 60 71.7
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 4.1e-13 77.4 58 74.1
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 4.1e-13 77.4 56 76.8
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 7.1e-13 76.6 60 66.7
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.2e-13 76.3 60 71.7
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 9.2e-13 76.3 60 70.0
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 9.2e-13 76.3 60 70.0
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 1.2e-12 75.9 58 72.4
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-12 75.9 60 70.0
FAN18G2960 Fragaria x ananassa HOM05D015635 ORTHO05D007162 1.6e-12 75.5 56 75.0
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 2.1e-12 75.1 60 70.0
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 2.7e-12 74.7 55 76.4
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.5e-12 74.3 58 72.4
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.5e-12 74.3 60 73.3
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 3.5e-12 74.3 57 71.9
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 3.5e-12 74.3 57 71.9
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 3.5e-12 74.3 60 70.0
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 4.6e-12 73.9 53 79.2
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 6.0e-12 73.6 53 77.4
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 6.0e-12 73.6 58 72.4
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 6.0e-12 73.6 60 66.7
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 1.0e-11 72.8 60 66.7
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 1.0e-11 72.8 60 66.7
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 1.0e-11 72.8 60 66.7
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 1.0e-11 72.8 60 66.7
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 1.0e-11 72.8 60 66.7
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 1.0e-11 72.8 60 66.7
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 1.0e-11 72.8 60 66.7
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 1.0e-11 72.8 60 66.7
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 2.3e-11 71.6 58 67.2
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 2.3e-11 71.6 58 67.2
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 2.3e-11 71.6 58 67.2
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.6e-11 69.7 58 69.0
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 8.6e-11 69.7 58 69.0
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 1.1e-10 69.3 60 65.0
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 1.5e-10 68.9 60 61.7
BraSC58t46502Z Brassica rapa HOM05D002824 ORTHO05D007162 1.9e-10 68.6 50 78.0
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 7.3e-10 66.6 60 61.7
BraSC103t45484Z Brassica rapa HOM05D002824 ORTHO05D007162 1.6e-09 65.5 59 67.8
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 1.6e-09 65.5 52 69.2
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 2.1e-09 65.1 52 71.2
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 1.4e-08 62.4 60 55.0
SEGI_01834 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 4.0e-08 60.8 57 54.4
SEGI_02369 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.0e-08 60.8 57 54.4
SEGI_04931 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.0e-08 60.8 57 54.4
SEGI_09600 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 4.0e-08 60.8 57 54.4
SEGI_17120 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.0e-08 60.8 57 54.4
SEGI_22757 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.0e-08 60.8 57 54.4
SEGI_27642 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 4.0e-08 60.8 57 54.4
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.8e-08 60.1 42 81.0
SEGI_30352 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.2e-07 59.3 57 52.6
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 3.4e-07 57.8 42 76.2
ClCG10G008280 Citrullus lanatus HOM05D002824 ORTHO05D007162 4.4e-07 57.4 48 68.8
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 6.4e-06 53.5 60 55.0


User provided reference genes

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