Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033564.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.6e-39 164.9 79 100.0
MELO3C032476.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.1e-20 102.1 78 67.9
CsaV3_1G030680 Cucumis sativus L. HOM05D000616 ORTHO05D000233 1.0e-19 99.8 78 65.4
MELO3C035573.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.4e-15 84.7 64 70.3
MELO3C034091.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.2e-13 77.8 50 80.0
MELO3C034371.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.6e-12 74.3 77 55.8
MELO3C030412.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.5e-10 68.6 50 72.0
MELO3C034902.2 Cucumis melo HOM05D000539 ORTHO05D000233 7.4e-10 67.0 74 51.4
CsaV3_5G020000 Cucumis sativus L. HOM05D000539 ORTHO05D000233 3.1e-08 61.6 68 50.0
FvH4_7g07223 Fragaria vesca HOM05D000539 ORTHO05D000592 3.1e-08 61.6 80 45.0
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 1.2e-07 59.7 80 41.2
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 1.2e-07 59.7 76 46.1
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-07 58.2 74 44.6
MELO3C035070.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.5e-07 57.8 84 44.0
Sed0019036 Sechium edule HOM05D000539 ORTHO05D000592 7.6e-07 57.0 43 60.5
FvH4_4g16176 Fragaria vesca HOM05D000539 ORTHO05D000233 9.9e-07 56.6 80 41.2
MELO3C028046.2 Cucumis melo HOM05D019265 ORTHO05D020530 1.3e-06 56.2 38 65.8
MELO3C028047.2 Cucumis melo HOM05D019265 ORTHO05D020530 1.3e-06 56.2 38 65.8
FvH4_5g23293 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-06 56.2 80 42.5
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.2 77 46.8
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 56.2 77 46.8
FAN16G1455 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.2 77 46.8
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 56.2 77 46.8
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 56.2 77 46.8
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 56.2 77 46.8
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 56.2 77 46.8
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 56.2 77 46.8
Sed0007296 Sechium edule HOM05D000539 ORTHO05D000592 1.3e-06 56.2 43 60.5
FvH4_3g14252 Fragaria vesca HOM05D000539 ORTHO05D000592 1.7e-06 55.8 76 42.1
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.7e-06 55.8 77 46.8
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.7e-06 55.8 77 46.8
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 2.2e-06 55.5 74 37.8
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 2.2e-06 55.5 80 43.8
CANSAT56G2878 Cannabis sativa HOM05D000539 ORTHO05D000233 3.8e-06 54.7 74 44.6
Hma1.2p1_1437F.1_g283240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 3.8e-06 54.7 81 37.0
FvH4_1g26740 Fragaria vesca HOM05D000539 ORTHO05D000592 4.9e-06 54.3 80 42.5
FAN19G2795 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.9e-06 54.3 80 42.5
FvH4_1g29807 Fragaria vesca HOM05D000539 ORTHO05D000233 6.4e-06 53.9 80 41.2
FAN19G1975 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.4e-06 53.9 76 40.8
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 6.4e-06 53.9 74 43.2
ClCG10G006990 Citrullus lanatus HOM05D000539 ORTHO05D000233 8.4e-06 53.5 58 55.2
FvH4_6g23071 Fragaria vesca HOM05D000539 ORTHO05D000233 8.4e-06 53.5 80 41.2
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 8.4e-06 53.5 81 37.0
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 8.4e-06 53.5 80 41.2
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 8.4e-06 53.5 74 41.9


User provided reference genes

Program Settings