Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 3.8e-157 558.1 283 100.0
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 4.8e-43 179.1 104 89.4
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 1.4e-42 177.6 110 84.5
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 1.4e-39 167.5 110 77.3
MELO3C002833.2 Cucumis melo HOM05D005827 ORTHO05D168179 2.4e-39 166.8 103 81.6
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 7.1e-31 138.7 98 75.5
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 7.1e-23 112.1 103 58.3
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 2.3e-21 107.1 109 53.2
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 3.9e-21 106.3 102 55.9
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 6.7e-21 105.5 100 55.0
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 1.5e-20 104.4 92 60.9
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 1.9e-20 104.0 102 55.9
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 1.9e-20 104.0 102 54.9
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 4.3e-20 102.8 129 46.5
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 5.7e-20 102.4 91 59.3
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 1.3e-19 101.3 103 52.4
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 1.6e-19 100.9 91 56.0
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 4.8e-19 99.4 93 58.1
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 8.2e-19 98.6 136 43.4
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 8.2e-19 98.6 93 60.2
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 8.2e-19 98.6 113 49.6
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 1.4e-18 97.8 133 41.4
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 1.4e-18 97.8 91 58.2
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 1.8e-18 97.4 134 46.3
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.8e-18 97.4 131 42.7
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 1.8e-18 97.4 102 53.9
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 1.8e-18 97.4 109 52.3
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 2.4e-18 97.1 96 54.2
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 2.4e-18 97.1 92 54.3
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.4e-18 97.1 91 58.2
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.4e-18 97.1 91 58.2
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 3.1e-18 96.7 132 43.9
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 6.9e-18 95.5 107 47.7
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 6.9e-18 95.5 141 44.0
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 6.9e-18 95.5 98 53.1
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 9.0e-18 95.1 94 54.3
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 9.0e-18 95.1 131 42.0
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 9.0e-18 95.1 132 43.2
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 1.2e-17 94.7 100 52.0
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 1.2e-17 94.7 101 52.5
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.5e-17 94.4 108 48.1
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 1.5e-17 94.4 131 42.0
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 2.0e-17 94.0 103 47.6
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.0e-17 94.0 131 41.2
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 2.0e-17 94.0 99 50.5
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 2.0e-17 94.0 110 47.3
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 2.0e-17 94.0 103 48.5
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 2.0e-17 94.0 103 48.5
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 2.6e-17 93.6 98 52.0
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.4e-17 93.2 91 53.8
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 3.4e-17 93.2 90 51.1
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 4.5e-17 92.8 92 52.2
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 4.5e-17 92.8 99 48.5
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 5.9e-17 92.4 135 40.7
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 5.9e-17 92.4 92 53.3
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 5.9e-17 92.4 129 41.1
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 7.7e-17 92.0 92 52.2
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 1.0e-16 91.7 90 52.2
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 1.3e-16 91.3 109 45.9
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 1.3e-16 91.3 141 40.4
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 2.2e-16 90.5 135 40.0
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 2.2e-16 90.5 135 40.0
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 2.9e-16 90.1 135 40.0
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 2.9e-16 90.1 103 46.6
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 3.8e-16 89.7 91 51.6
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 5.0e-16 89.4 106 45.3
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 5.0e-16 89.4 92 51.1
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 8.5e-16 88.6 102 48.0
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 8.5e-16 88.6 135 39.3
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.1e-15 88.2 110 45.5
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 1.4e-15 87.8 97 48.5
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 1.9e-15 87.4 92 50.0
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 1.9e-15 87.4 85 57.6
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 2.5e-15 87.0 98 48.0
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 2.5e-15 87.0 109 45.0
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 4.2e-15 86.3 116 44.0
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 4.2e-15 86.3 109 45.9
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 7.2e-15 85.5 118 43.2
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 1.2e-14 84.7 140 39.3
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 2.1e-14 84.0 113 46.0
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 3.6e-14 83.2 111 42.3
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 4.6e-14 82.8 91 50.5
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 4.6e-14 82.8 92 48.9
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 6.1e-14 82.4 137 38.7
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 6.1e-14 82.4 92 47.8
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 3.9e-13 79.7 99 43.4
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 3.9e-13 79.7 133 39.1
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 5.1e-13 79.3 83 49.4
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 5.1e-13 79.3 100 43.0
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 8.8e-13 78.6 88 48.9
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 2.5e-12 77.0 81 48.1
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 3.3e-12 76.6 81 48.1
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 4.3e-12 76.3 97 44.3
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 4.3e-12 76.3 102 43.1
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 9.7e-12 75.1 96 46.9
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 1.3e-11 74.7 135 35.6
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 1.7e-11 74.3 65 58.5
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.7e-11 74.3 88 44.3
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 1.7e-11 74.3 75 53.3
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 3.7e-11 73.2 83 45.8
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 3.7e-11 73.2 81 45.7
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 3.7e-11 73.2 102 45.1
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 3.7e-11 73.2 94 46.8
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 4.8e-11 72.8 72 50.0
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 6.3e-11 72.4 84 46.4
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 6.3e-11 72.4 103 40.8
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 6.3e-11 72.4 110 44.5
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 8.2e-11 72.0 87 48.3
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.4e-10 71.2 100 40.0
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 1.8e-10 70.9 81 46.9
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 1.8e-10 70.9 81 46.9
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 1.8e-10 70.9 87 48.3
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 3.1e-10 70.1 88 44.3
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 3.1e-10 70.1 120 38.3
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 6.9e-10 68.9 92 46.7
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 9.1e-10 68.6 87 47.1
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 1.5e-09 67.8 88 50.0
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 2.0e-09 67.4 93 45.2
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 2.0e-09 67.4 101 42.6
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 2.9e-08 63.5 89 43.8
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 5.0e-08 62.8 81 42.0
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 5.0e-08 62.8 107 34.6
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 5.0e-08 62.8 90 36.7
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 6.5e-08 62.4 100 39.0
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 1.1e-07 61.6 86 40.7
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 2.5e-07 60.5 109 37.6
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 5.5e-07 59.3 87 35.6
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 9.4e-07 58.5 91 39.6
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 1.2e-06 58.2 66 53.0
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 3.6e-06 56.6 45 55.6
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 6.1e-06 55.8 109 36.7


User provided reference genes

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