Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033501.2 Cucumis melo HOM05D000539 ORTHO05D003213 9.3e-98 360.1 174 100.0
CsaV3_1G024200 Cucumis sativus L. HOM05D000107 ORTHO05D000062 3.3e-18 95.9 62 66.1
CsaV3_1G031320 Cucumis sativus L. HOM05D000107 ORTHO05D003213 3.3e-18 95.9 62 66.1
CsaV3_6G019030 Cucumis sativus L. HOM05D000107 ORTHO05D003213 3.3e-18 95.9 62 66.1
CsaV3_6G032210 Cucumis sativus L. HOM05D000107 ORTHO05D003213 3.3e-18 95.9 62 66.1
CsaV3_1G029970 Cucumis sativus L. HOM05D000107 ORTHO05D003213 5.6e-18 95.1 61 67.2
CsaV3_5G015090 Cucumis sativus L. HOM05D000107 ORTHO05D003213 5.6e-18 95.1 61 67.2
CsaV3_7G011410 Cucumis sativus L. HOM05D000107 ORTHO05D003213 6.1e-17 91.7 62 62.9
CsaV3_3G021750 Cucumis sativus L. HOM05D000107 ORTHO05D003213 3.4e-15 85.9 61 62.3
MELO3C028546.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-14 84.0 47 72.3
MELO3C033907.2 Cucumis melo HOM05D009894 ORTHO05D013589 1.3e-14 84.0 59 61.0
MELO3C030851.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.9e-14 82.8 49 69.4
MELO3C030161.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.2e-13 79.3 47 70.2
MELO3C033140.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.4e-13 78.6 88 40.9
MELO3C033645.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.0e-12 75.1 54 50.0
MELO3C034305.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-11 73.9 71 49.3
MELO3C034611.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.7e-11 73.6 54 51.9
MELO3C001574.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.3e-11 73.2 49 65.3
MELO3C035055.2 Cucumis melo HOM05D000004 ORTHO05D000002 2.3e-11 73.2 50 54.0
MELO3C028475.2 Cucumis melo HOM05D004674 ORTHO05D029177 8.6e-11 71.2 38 81.6
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.1e-10 70.9 57 47.4
MELO3C034193.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.1e-10 70.9 54 51.9
Hma1.2p1_1033F.1_g250230 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 2.5e-10 69.7 61 49.2
SHI03580 Sapria himalayana HOM05D000616 ORTHO05D000233 5.6e-10 68.6 56 51.8
CANSAT54G0700 Cannabis sativa HOM05D000107 ORTHO05D000062 7.3e-10 68.2 61 50.8
CANSAT80G0350 Cannabis sativa HOM05D000107 ORTHO05D000062 7.3e-10 68.2 61 50.8
MELO3C033511.2 Cucumis melo HOM05D000539 ORTHO05D000592 9.5e-10 67.8 54 46.3
Sed0016665 Sechium edule HOM05D000539 ORTHO05D000592 2.8e-09 66.2 50 46.0
Sed0019626 Sechium edule HOM05D000539 ORTHO05D000592 2.8e-09 66.2 50 46.0
SHI46859 Sapria himalayana HOM05D000107 ORTHO05D000062 3.6e-09 65.9 56 48.2
CANSAT21G1204 Cannabis sativa HOM05D000107 ORTHO05D000062 4.7e-09 65.5 61 45.9
MELO3C034551.2 Cucumis melo HOM05D007110 ORTHO05D000233 4.7e-09 65.5 84 34.5
Sed0004440 Sechium edule HOM05D000539 ORTHO05D000592 4.7e-09 65.5 50 46.0
Sed0019579 Sechium edule HOM05D000539 ORTHO05D000592 4.7e-09 65.5 50 46.0
CANSAT35G1642 Cannabis sativa HOM05D000107 ORTHO05D000062 8.0e-09 64.7 61 44.3
MELO3C028814.2 Cucumis melo HOM05D000539 ORTHO05D000592 8.0e-09 64.7 56 48.2
MELO3C034786.2 Cucumis melo HOM05D000539 ORTHO05D000592 8.0e-09 64.7 54 48.1
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.0e-09 64.7 62 41.9
RhsimUnG0032800 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.0e-09 64.7 62 41.9
Sed0011271 Sechium edule HOM05D000539 ORTHO05D000592 8.0e-09 64.7 50 46.0
Ca_02256_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.1e-08 64.3 61 49.2
Ca_14973_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.1e-08 64.3 61 49.2
FvH4_2g18191 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-08 63.9 58 46.6
Rhsim01G0019000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-08 63.9 61 44.3
Atru.chr1.1855 Acer truncatum HOM05D000107 ORTHO05D000062 1.8e-08 63.5 63 46.0
Atru.chr4.455 Acer truncatum HOM05D000107 ORTHO05D000062 1.8e-08 63.5 63 46.0
ClCG10G009520 Citrullus lanatus HOM05D000539 ORTHO05D000592 1.8e-08 63.5 51 47.1
FvH4_1g29805 Fragaria vesca HOM05D000107 ORTHO05D000062 1.8e-08 63.5 58 46.6
Sed0000174 Sechium edule HOM05D000539 ORTHO05D000592 1.8e-08 63.5 50 44.0
CANSAT54G2061 Cannabis sativa HOM05D000107 ORTHO05D000062 2.3e-08 63.2 61 41.0
CANSAT64G3014 Cannabis sativa HOM05D000107 ORTHO05D000062 2.3e-08 63.2 61 41.0
Ciclev10010251m.g Citrus clementina HOM05D000107 ORTHO05D003213 3.1e-08 62.8 57 52.6
Rhsim01G0119700 Rhododendron simsii HOM05D000107 ORTHO05D003213 3.1e-08 62.8 59 49.2
MELO3C028643.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.0e-08 62.4 54 46.3
Sed0014995 Sechium edule HOM05D000539 ORTHO05D000592 4.0e-08 62.4 50 44.0
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 6.8e-08 61.6 62 45.2
SHI29589 Sapria himalayana HOM05D000107 ORTHO05D003213 6.8e-08 61.6 56 48.2
FvH4_3g31743 Fragaria vesca HOM05D000107 ORTHO05D000062 8.9e-08 61.2 58 44.8
Rhsim09G0057000 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.9e-08 61.2 62 46.8
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.9e-08 61.2 62 43.5
ECA232G2916 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-07 60.8 59 42.4
CSS0022362 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-07 60.5 62 43.5
Ciclev10003481m.g Citrus clementina HOM05D000107 ORTHO05D003213 2.0e-07 60.1 57 49.1
Prupe.6G136200 Prunus persica HOM05D000107 ORTHO05D000062 2.0e-07 60.1 61 44.3
CANSAT01G1821 Cannabis sativa HOM05D000107 ORTHO05D000062 2.6e-07 59.7 61 42.6
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 2.6e-07 59.7 59 42.4
PSO782G5344 Papaver somniferum HOM05D000107 ORTHO05D000062 2.6e-07 59.7 59 47.5
Rhsim02G0154800 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-07 59.3 62 41.9
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-07 58.9 62 41.9
RhsimUnG0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-07 58.9 62 41.9
CANSAT54G0813 Cannabis sativa HOM05D000107 ORTHO05D000062 5.8e-07 58.5 59 39.0
CANSAT78G2361 Cannabis sativa HOM05D000107 ORTHO05D000062 5.8e-07 58.5 59 39.0
PSO478G3651 Papaver somniferum HOM05D000107 ORTHO05D000062 5.8e-07 58.5 59 47.5
RcHm_v2.0_Chr3g0495641 Rosa chinensis HOM05D000107 ORTHO05D003213 5.8e-07 58.5 62 38.7
CANSAT21G2308 Cannabis sativa HOM05D000107 ORTHO05D000062 7.5e-07 58.2 118 29.7
PSO541G1469 Papaver somniferum HOM05D010561 ORTHO05D011256 7.5e-07 58.2 64 42.2
Rhsim09G0096400 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.5e-07 58.2 62 41.9
Migut.I00288 Erythranthe guttata HOM05D000107 ORTHO05D003213 1.3e-06 57.4 59 49.2
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-06 57.4 62 45.2
CANSAT21G0166 Cannabis sativa HOM05D000107 ORTHO05D000062 1.7e-06 57.0 61 41.0
PSO675G7987 Papaver somniferum HOM05D010561 ORTHO05D011256 1.7e-06 57.0 64 42.2
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-06 57.0 62 45.2
SHI35925 Sapria himalayana HOM05D014941 ORTHO05D003213 1.7e-06 57.0 55 45.5
SHI49412 Sapria himalayana HOM05D014941 ORTHO05D003213 2.2e-06 56.6 54 44.4
Sed0025490 Sechium edule HOM05D000539 ORTHO05D000592 2.2e-06 56.6 45 57.8
Sed0026544 Sechium edule HOM05D000539 ORTHO05D000592 2.2e-06 56.6 45 57.8
MELO3C034976.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.9e-06 56.2 45 57.8
MELO3C034533.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.7e-06 55.8 48 45.8
RcHm_v2.0_Chr1g0331761 Rosa chinensis HOM05D000107 ORTHO05D003213 3.7e-06 55.8 58 41.4
CANSAT78G1485 Cannabis sativa HOM05D000107 ORTHO05D000062 4.9e-06 55.5 57 42.1
CANSAT35G0130 Cannabis sativa HOM05D000107 ORTHO05D000062 6.4e-06 55.1 59 37.3
Ca_05353_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.4e-06 55.1 61 39.3
PSO675G6235 Papaver somniferum HOM05D010561 ORTHO05D011256 6.4e-06 55.1 61 41.0
FvH4_4g09213 Fragaria vesca HOM05D000107 ORTHO05D000062 8.3e-06 54.7 62 37.1
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 8.3e-06 54.7 60 38.3
PSO541G5016 Papaver somniferum HOM05D010561 ORTHO05D011256 8.3e-06 54.7 61 41.0
Rhsim01G0079200 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.3e-06 54.7 58 41.4
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.3e-06 54.7 58 41.4
Sed0024905 Sechium edule HOM05D000539 ORTHO05D000592 8.3e-06 54.7 45 55.6


User provided reference genes

Program Settings