Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033500.2 Cucumis melo HOM05D004788 ORTHO05D034954 1.3e-72 276.2 131 100.0
MELO3C030809.2 Cucumis melo HOM05D004788 ORTHO05D034954 1.4e-18 96.7 66 69.7
Sed0008505 Sechium edule HOM05D004788 ORTHO05D006465 1.9e-18 96.3 55 76.4
MELO3C030758.2 Cucumis melo HOM05D004788 ORTHO05D034954 5.1e-16 88.2 50 78.0
CsaV3_5G036360 Cucumis sativus L. HOM05D004788 ORTHO05D006465 1.9e-15 86.3 46 80.4
Sabra10G0171400 Salix brachista HOM05D004788 ORTHO05D006465 3.3e-15 85.5 62 61.3
ClCG05G020950 Citrullus lanatus HOM05D004788 ORTHO05D006465 5.7e-15 84.7 46 78.3
Glyma.10G211600 Glycine max HOM05D004788 ORTHO05D006465 1.3e-14 83.6 53 67.9
MELO3C012434.2 Cucumis melo HOM05D004788 ORTHO05D006465 3.7e-14 82.0 46 78.3
Glyma.20G179400 Glycine max HOM05D004788 ORTHO05D006465 3.7e-14 82.0 53 66.0
Psat6g184480 Pisum sativum HOM05D004788 ORTHO05D006465 3.7e-14 82.0 53 66.0
Ca_29597_v3 Cicer arietinum L. HOM05D004788 ORTHO05D006465 6.3e-14 81.3 53 66.0
Medtr1g095360 Medicago truncatula HOM05D004788 ORTHO05D006465 1.1e-13 80.5 53 66.0
Phvul.007G094100 Phaseolus vulgaris HOM05D004788 ORTHO05D006465 1.1e-13 80.5 53 64.2
TPR.G1941 Trifolium pratense HOM05D004788 ORTHO05D006465 1.1e-13 80.5 53 64.2
VMungo0720G1279 Vigna mungo HOM05D004788 ORTHO05D006465 1.1e-13 80.5 53 64.2
Lalb_Chr02g0142131 Lupinus albus HOM05D004788 ORTHO05D006465 4.1e-13 78.6 53 60.4
arahy.Tifrunner.gnm1.ann1.CYD8BJ Arachis hypogaea HOM05D004788 ORTHO05D006465 5.3e-13 78.2 53 64.2
arahy.Tifrunner.gnm1.ann1.M3N3P9 Arachis hypogaea HOM05D004788 ORTHO05D006465 5.3e-13 78.2 53 64.2
Manes.07G101300 Manihot esculenta HOM05D004788 ORTHO05D006465 5.3e-13 78.2 46 69.6
Potri.010G221500 Populus trichocarpa HOM05D004788 ORTHO05D006465 5.3e-13 78.2 46 71.7
Migut.F01772 Erythranthe guttata HOM05D004788 ORTHO05D006465 6.9e-13 77.8 46 69.6
CiPaw.02G174400 Carya illinoinensis HOM05D004788 ORTHO05D006465 1.2e-12 77.0 46 67.4
CDE05G0857 Ceratophyllum demersum HOM05D004788 ORTHO05D006465 1.5e-12 76.6 54 57.4
Lj5g0009066 Lotus japonicus HOM05D004788 ORTHO05D006465 2.0e-12 76.3 54 57.4
arahy.Tifrunner.gnm1.ann1.6SV6NI Arachis hypogaea HOM05D004788 ORTHO05D006465 2.6e-12 75.9 53 62.3
arahy.Tifrunner.gnm1.ann1.L4RTFU Arachis hypogaea HOM05D004788 ORTHO05D006465 2.6e-12 75.9 53 62.3
DCAR_015314 Daucus carota HOM05D004788 ORTHO05D006465 4.5e-12 75.1 46 63.0
SGA_v2.0_scaffold341G49365 Striga asiatica HOM05D004788 ORTHO05D006465 1.0e-11 73.9 46 67.4
CAN.G4.2 Capsicum annuum HOM05D004788 ORTHO05D006465 1.3e-11 73.6 46 67.4
Ciclev10030655m.g Citrus clementina HOM05D004788 ORTHO05D006465 1.3e-11 73.6 46 65.2
ECA232G0614 Erigeron canadensis HOM05D004788 ORTHO05D006465 1.3e-11 73.6 46 60.9
Haze_16900 Corylus avellana HOM05D004788 ORTHO05D006465 1.7e-11 73.2 46 63.0
HanXRQChr08g0208591 Helianthus annuus HOM05D004788 ORTHO05D006465 1.7e-11 73.2 46 60.9
TWI38G1549 Tripterygium wilfordii HOM05D004788 ORTHO05D006465 1.7e-11 73.2 46 63.0
Lj1C915G0 Lonicera japonica HOM05D004788 ORTHO05D006465 2.2e-11 72.8 46 63.0
AUR62007018 Chenopodium quinoa HOM05D004788 ORTHO05D006465 2.9e-11 72.4 65 52.3
CSS0002233 Camellia sinensis var. sinensis HOM05D004788 ORTHO05D006465 3.8e-11 72.0 46 65.2
CSS0028648 Camellia sinensis var. sinensis HOM05D004788 ORTHO05D006465 3.8e-11 72.0 46 65.2
CANSAT25G2619 Cannabis sativa HOM05D004788 ORTHO05D006465 3.8e-11 72.0 53 56.6
Hma1.2p1_0030F.1_g018330 Hydrangea macrophylla HOM05D004788 ORTHO05D006465 3.8e-11 72.0 50 58.0
EL10Ac5g12961 Beta vulgaris HOM05D004788 ORTHO05D006465 5.0e-11 71.6 50 62.0
COL.COLO4_23692 Corchorus olitorius HOM05D004788 ORTHO05D006465 5.0e-11 71.6 53 52.8
Lsat_1_v5_gn_4_181581 Lactuca sativa HOM05D004788 ORTHO05D006465 5.0e-11 71.6 46 60.9
RcHm_v2.0_Chr1g0363521 Rosa chinensis HOM05D004788 ORTHO05D006465 8.4e-11 70.9 53 54.7
Ah.12g052940 Amaranthus hybridus HOM05D004788 ORTHO05D006465 1.1e-10 70.5 53 54.7
Rhsim09G0110900 Rhododendron simsii HOM05D004788 ORTHO05D006465 1.1e-10 70.5 46 63.0
TAR626G1809 Trochodendron aralioides HOM05D004788 ORTHO05D006465 1.1e-10 70.5 46 63.0
Hma1.2p1_0030F.1_g018320 Hydrangea macrophylla HOM05D004788 ORTHO05D006465 1.4e-10 70.1 46 60.9
Prupe.2G214500 Prunus persica HOM05D004788 ORTHO05D006465 1.9e-10 69.7 53 52.8
SalBow5G2521 Salvia bowleyana HOM05D004788 ORTHO05D006465 1.9e-10 69.7 46 63.0
Sc20g0001910 Simmondsia chinensis HOM05D004788 ORTHO05D006465 1.9e-10 69.7 129 31.0
A04p21930 Brassica napus HOM05D004788 ORTHO05D006465 2.5e-10 69.3 68 50.0
AUR62019882 Chenopodium quinoa HOM05D004788 ORTHO05D006465 2.5e-10 69.3 46 63.0
BraA04t17760Z Brassica rapa HOM05D004788 ORTHO05D006465 3.2e-10 68.9 46 63.0
Dinv11782 Davidia involucrata HOM05D004788 ORTHO05D006465 3.2e-10 68.9 46 63.0
Thecc.10G072500 Theobroma cacao HOM05D004788 ORTHO05D006465 3.2e-10 68.9 53 50.9
Cpa.g.sc53.70 Carica papaya HOM05D004788 ORTHO05D006465 4.2e-10 68.6 46 63.0
Duzib128G1556 Durio zibethinus HOM05D004788 ORTHO05D006465 4.2e-10 68.6 53 50.9
QL08p056120 Quercus lobata HOM05D004788 ORTHO05D006465 5.5e-10 68.2 46 60.9
Solyc04g049360.3 Solanum lycopersicum HOM05D004788 ORTHO05D006465 5.5e-10 68.2 46 58.7
Sopen04g019320 Solanum pennellii HOM05D004788 ORTHO05D006465 5.5e-10 68.2 46 58.7
GSVIVG01016291001 Vitis vinifera HOM05D004788 ORTHO05D006465 5.5e-10 68.2 53 52.8
Aa31LG5G7350 Aethionema arabicum HOM05D004788 ORTHO05D006465 7.2e-10 67.8 53 60.4
FvH4_7g19690 Fragaria vesca HOM05D004788 ORTHO05D006465 7.2e-10 67.8 53 50.9
FAN01G2387 Fragaria x ananassa HOM05D004788 ORTHO05D006465 7.2e-10 67.8 53 50.9
FAN10G0980 Fragaria x ananassa HOM05D004788 ORTHO05D006465 7.2e-10 67.8 53 50.9
Sp4g11690 Schrenkiella parvula HOM05D004788 ORTHO05D006465 7.2e-10 67.8 46 63.0
AL4G23410 Arabidopsis lyrata HOM05D004788 ORTHO05D006465 9.3e-10 67.4 46 63.0
AT2G28880 Arabidopsis thaliana HOM05D004788 ORTHO05D006465 9.3e-10 67.4 46 63.0
Carub.0004s0987 Capsella rubella HOM05D004788 ORTHO05D006465 9.3e-10 67.4 46 63.0
FAN06G3031 Fragaria x ananassa HOM05D004788 ORTHO05D006465 9.3e-10 67.4 48 56.2
FAN10G0780 Fragaria x ananassa HOM05D004788 ORTHO05D006465 1.2e-09 67.0 53 50.9
BcaC02g08128 Brassica carinata HOM05D004788 ORTHO05D006465 1.6e-09 66.6 46 60.9
C04p58070 Brassica napus HOM05D004788 ORTHO05D006465 1.6e-09 66.6 46 60.9
BolC4t27333H Brassica oleracea HOM05D004788 ORTHO05D006465 1.6e-09 66.6 46 60.9
C04p22120 Brassica napus HOM05D004788 ORTHO05D006465 2.1e-09 66.2 49 57.1
BolC4t23734H Brassica oleracea HOM05D004788 ORTHO05D006465 2.1e-09 66.2 49 57.1
PSO170G4427 Papaver somniferum HOM05D004788 ORTHO05D006465 2.7e-09 65.9 53 56.6
SHI08836 Sapria himalayana HOM05D004788 ORTHO05D006465 2.7e-09 65.9 50 60.0
PSO063G3786 Papaver somniferum HOM05D004788 ORTHO05D006465 3.5e-09 65.5 53 54.7
BcaB06g28261 Brassica carinata HOM05D004788 ORTHO05D006465 4.6e-09 65.1 46 58.7
Cc09_g02020 Coffea canephora HOM05D004788 ORTHO05D006465 4.6e-09 65.1 46 60.9
Mapoly0009s0140 Marchantia polymorpha HOM05D004788 ORTHO05D006465 4.6e-09 65.1 53 50.9
BcaB02g10208 Brassica carinata HOM05D004788 ORTHO05D006465 6.1e-09 64.7 46 60.9
BcaC02g11019 Brassica carinata HOM05D004788 ORTHO05D006465 6.1e-09 64.7 46 60.9
A07p19340 Brassica napus HOM05D004788 ORTHO05D006465 6.1e-09 64.7 46 60.9
Nitab4.5_0013243g0010 Nicotiana tabacum HOM05D004788 ORTHO05D006465 6.1e-09 64.7 46 56.5
ATR0626G067 Amborella trichopoda HOM05D004788 ORTHO05D006465 7.9e-09 64.3 53 50.9
Thhalv10016200m.g Eutrema salsugineum HOM05D004788 ORTHO05D006465 7.9e-09 64.3 46 60.9
Peaxi162Scf00747g00211 Petunia axillaris HOM05D004788 ORTHO05D006465 7.9e-09 64.3 45 60.0
FAN03G1313 Fragaria x ananassa HOM05D004788 ORTHO05D006465 1.0e-08 63.9 53 49.1
Gorai.011G240300 Gossypium raimondii HOM05D004788 ORTHO05D006465 1.3e-08 63.5 121 32.2
MD01G1109300 Malus domestica HOM05D004788 ORTHO05D006465 1.3e-08 63.5 53 49.1
HPP92_010286 Vanilla planifolia HOM05D004788 ORTHO05D006465 1.8e-08 63.2 53 50.9
GSVIVG01016290001 Vitis vinifera HOM05D004788 ORTHO05D006465 2.3e-08 62.8 46 58.7
Nn8g40780 Nelumbo nucifera HOM05D004788 ORTHO05D006465 3.0e-08 62.4 46 58.7
MD07G1175300 Malus domestica HOM05D004788 ORTHO05D006465 3.9e-08 62.0 53 47.2
Oeu043947.4 Olea europaea HOM05D004788 ORTHO05D006465 5.1e-08 61.6 46 58.7
Aqoxy7G02809 Aquilegia oxysepala HOM05D004788 ORTHO05D006465 6.7e-08 61.2 53 47.2
AagrBONN_evm.TU.Sc2ySwM_368.2427 Anthoceros agrestis HOM05D004788 ORTHO05D006465 1.1e-07 60.5 94 34.0
Gohir.D10G214700 Gossypium hirsutum HOM05D004788 ORTHO05D006465 1.1e-07 60.5 46 56.5
PGR142G2437 Punica granatum HOM05D004788 ORTHO05D006465 1.1e-07 60.5 53 50.9
Gohir.A10G206600 Gossypium hirsutum HOM05D004788 ORTHO05D006465 9.7e-07 57.4 46 54.3
unitig_60.g25702 Utricularia gibba HOM05D004788 ORTHO05D006465 1.3e-06 57.0 44 56.8
SEGI_34163 Sequoiadendron giganteum HOM05D004788 ORTHO05D006465 2.8e-06 55.8 46 60.9
AagrBONN_evm.TU.Sc2ySwM_26.2 Anthoceros agrestis HOM05D004788 ORTHO05D006465 8.2e-06 54.3 53 45.3


User provided reference genes

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