Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033416.2 Cucumis melo HOM05D000097 ORTHO05D000041 5.8e-136 487.6 264 100.0
MELO3C002969.2 Cucumis melo HOM05D000097 ORTHO05D000041 4.3e-22 109.4 75 77.3
ClCG00G002900 Citrullus lanatus HOM05D000097 ORTHO05D000041 1.3e-18 97.8 104 54.8
ClCG07G000470 Citrullus lanatus HOM05D000097 ORTHO05D000041 1.3e-18 97.8 73 69.9
CsaV3_5G025200 Cucumis sativus L. HOM05D000097 ORTHO05D000041 1.4e-17 94.4 73 67.1
MELO3C002962.2 Cucumis melo HOM05D000097 ORTHO05D000041 7.9e-16 88.6 73 64.4
MELO3C002971.2 Cucumis melo HOM05D000097 ORTHO05D000041 6.7e-15 85.5 73 61.6
CsaV3_5G025210 Cucumis sativus L. HOM05D000097 ORTHO05D000041 6.9e-12 75.5 91 49.5
Sed0006859 Sechium edule HOM05D000097 ORTHO05D000041 1.2e-11 74.7 75 53.3
Sed0025781 Sechium edule HOM05D000097 ORTHO05D000041 5.9e-11 72.4 73 50.7
Peaxi162Scf00652g00214 Petunia axillaris HOM05D000097 ORTHO05D000041 2.1e-08 63.9 76 44.7
SalBow6G2878 Salvia bowleyana HOM05D000097 ORTHO05D000041 2.7e-08 63.5 74 44.6
CANSAT11G0308 Cannabis sativa HOM05D000097 ORTHO05D000041 3.6e-08 63.2 71 43.7
SalBow6G5415 Salvia bowleyana HOM05D000097 ORTHO05D000041 3.6e-08 63.2 74 44.6
Cc01_g19070 Coffea canephora HOM05D000097 ORTHO05D000041 4.6e-08 62.8 75 46.7
arahy.Tifrunner.gnm1.ann1.6ST5A0 Arachis hypogaea HOM05D000097 ORTHO05D000041 1.8e-07 60.8 82 41.5
Prupe.1G007500 Prunus persica HOM05D000097 ORTHO05D000041 1.8e-07 60.8 75 42.7
CiPaw.15G182400 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.3e-07 60.5 89 38.2
GSVIVG01023771001 Vitis vinifera HOM05D000097 ORTHO05D000041 2.3e-07 60.5 74 41.9
CAN.G767.38 Capsicum annuum HOM05D000097 ORTHO05D000041 3.0e-07 60.1 73 41.1
QL12p042001 Quercus lobata HOM05D000097 ORTHO05D000041 3.0e-07 60.1 83 38.6
CiPaw.07G087300 Carya illinoinensis HOM05D000097 ORTHO05D000041 3.9e-07 59.7 74 41.9
QL12p041815 Quercus lobata HOM05D000097 ORTHO05D000041 3.9e-07 59.7 75 42.7
QL12p041961 Quercus lobata HOM05D000097 ORTHO05D000041 3.9e-07 59.7 58 48.3
RcHm_v2.0_Chr6g0290091 Rosa chinensis HOM05D000097 ORTHO05D000041 3.9e-07 59.7 88 40.9
Duzib138G0530 Durio zibethinus HOM05D000097 ORTHO05D000041 5.1e-07 59.3 74 40.5
Dinv38234 Davidia involucrata HOM05D000097 ORTHO05D000041 6.7e-07 58.9 68 45.6
Nitab4.5_0000676g0130 Nicotiana tabacum HOM05D000097 ORTHO05D000041 6.7e-07 58.9 76 40.8
PGR119G1681 Punica granatum HOM05D000097 ORTHO05D000041 6.7e-07 58.9 55 47.3
GSVIVG01001213001 Vitis vinifera HOM05D000097 ORTHO05D000041 6.7e-07 58.9 83 42.2
CiPaw.15G182000 Carya illinoinensis HOM05D000097 ORTHO05D000041 8.7e-07 58.5 89 37.1
Hma1.2p1_0172F.1_g075960 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 8.7e-07 58.5 54 48.1
MBI04_g27907_MAGBIO Magnolia biondii HOM05D000097 ORTHO05D000041 8.7e-07 58.5 75 41.3
Nitab4.5_0000676g0060 Nicotiana tabacum HOM05D000097 ORTHO05D000041 8.7e-07 58.5 76 40.8
FvH4_2g23030 Fragaria vesca HOM05D000097 ORTHO05D000041 1.1e-06 58.2 79 40.5
FAN15G0124 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.1e-06 58.2 79 40.5
FAN24G3408 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.1e-06 58.2 79 40.5
Lj1C54T4 Lonicera japonica HOM05D000097 ORTHO05D000041 1.1e-06 58.2 73 38.4
VMungo0540G0734 Vigna mungo HOM05D000097 ORTHO05D000041 1.1e-06 58.2 71 42.3
arahy.Tifrunner.gnm1.ann1.1CD59K Arachis hypogaea HOM05D000097 ORTHO05D000041 1.5e-06 57.8 73 42.5
arahy.Tifrunner.gnm1.ann1.BJSC2Z Arachis hypogaea HOM05D000097 ORTHO05D000041 1.5e-06 57.8 73 42.5
CANSAT78G2347 Cannabis sativa HOM05D000097 ORTHO05D000041 1.5e-06 57.8 72 41.7
CiPaw.07G087500 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.5e-06 57.8 83 37.3
Haze_04655 Corylus avellana HOM05D000097 ORTHO05D000041 1.5e-06 57.8 83 38.6
Prupe.1G007700 Prunus persica HOM05D000097 ORTHO05D000041 1.5e-06 57.8 74 43.2
Prupe.8G235300 Prunus persica HOM05D000097 ORTHO05D000041 1.5e-06 57.8 63 47.6
CiPaw.15G182200 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.9e-06 57.4 82 39.0
Ciclev10019036m.g Citrus clementina HOM05D000097 ORTHO05D000041 1.9e-06 57.4 118 31.4
MBI04_g26286_MAGBIO Magnolia biondii HOM05D000097 ORTHO05D000041 1.9e-06 57.4 74 41.9
Prupe.1G160200 Prunus persica HOM05D000097 ORTHO05D000041 1.9e-06 57.4 52 53.8
PGR119G1822 Punica granatum HOM05D000097 ORTHO05D000041 1.9e-06 57.4 91 37.4
Haze_04651 Corylus avellana HOM05D000097 ORTHO05D000041 2.5e-06 57.0 82 37.8
RcHm_v2.0_Chr6g0290111 Rosa chinensis HOM05D000097 ORTHO05D000041 2.5e-06 57.0 162 28.4
Actinidia19957 Actinidia chinensis HOM05D000097 ORTHO05D000041 3.3e-06 56.6 88 42.0
CSS0020380 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 3.3e-06 56.6 81 40.7
Gohir.A08G064400 Gossypium hirsutum HOM05D000097 ORTHO05D000041 3.3e-06 56.6 78 35.9
Gorai.004G077300 Gossypium raimondii HOM05D000097 ORTHO05D000041 3.3e-06 56.6 78 35.9
Lj1A53G40 Lonicera japonica HOM05D000097 ORTHO05D000041 3.3e-06 56.6 76 39.5
Lj1C52T4 Lonicera japonica HOM05D000097 ORTHO05D000041 3.3e-06 56.6 76 39.5
MD03G1258700 Malus domestica HOM05D000097 ORTHO05D000041 3.3e-06 56.6 54 44.4
Sabra02G0039800 Salix brachista HOM05D000097 ORTHO05D000041 3.3e-06 56.6 78 35.9
Migut.N02030 Erythranthe guttata HOM05D000097 ORTHO05D000041 4.3e-06 56.2 74 36.5
FAN22G2417 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.3e-06 56.2 70 42.9
Medtr2g020450 Medicago truncatula HOM05D000097 ORTHO05D000041 4.3e-06 56.2 81 43.2
Potri.002G048832 Populus trichocarpa HOM05D000097 ORTHO05D000041 4.3e-06 56.2 81 35.8
Sopen00g009900 Solanum pennellii HOM05D000097 ORTHO05D000041 4.3e-06 56.2 50 48.0
Sopen12g033170 Solanum pennellii HOM05D000097 ORTHO05D000041 4.3e-06 56.2 50 48.0
Actinidia25184 Actinidia chinensis HOM05D000097 ORTHO05D000041 5.7e-06 55.8 101 34.7
CSS0001544 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 5.7e-06 55.8 73 35.6
FvH4_4g13500 Fragaria vesca HOM05D000097 ORTHO05D000041 5.7e-06 55.8 70 42.9
FAN07G1278 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.7e-06 55.8 69 43.5
FAN12G1652 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.7e-06 55.8 70 42.9
FAN17G2466 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.7e-06 55.8 69 43.5
MD03G1258800 Malus domestica HOM05D000097 ORTHO05D000041 5.7e-06 55.8 47 51.1
MD13G1283300 Malus domestica HOM05D000097 ORTHO05D000041 5.7e-06 55.8 52 48.1
Oeu023628.1 Olea europaea HOM05D000097 ORTHO05D000041 5.7e-06 55.8 82 41.5
Ca_00584_v3 Cicer arietinum L. HOM05D000097 ORTHO05D000041 7.4e-06 55.5 143 29.4
Lj1A53G41 Lonicera japonica HOM05D000097 ORTHO05D000041 7.4e-06 55.5 47 46.8
MBI04_g10394_MAGBIO Magnolia biondii HOM05D000097 ORTHO05D000041 7.4e-06 55.5 48 52.1
PSO210G6515 Papaver somniferum HOM05D000097 ORTHO05D000041 7.4e-06 55.5 68 41.2
Thecc.01G272600 Theobroma cacao HOM05D000097 ORTHO05D000041 7.4e-06 55.5 73 37.0
CAN.G767.37 Capsicum annuum HOM05D000097 ORTHO05D000041 9.7e-06 55.1 100 31.0
PSO832G1868 Papaver somniferum HOM05D000097 ORTHO05D000041 9.7e-06 55.1 73 38.4
RcHm_v2.0_Chr4g0413451 Rosa chinensis HOM05D000097 ORTHO05D000041 9.7e-06 55.1 70 40.0
RcHm_v2.0_Chr6g0290151 Rosa chinensis HOM05D000097 ORTHO05D000041 9.7e-06 55.1 68 42.6
VMungo0540G1282 Vigna mungo HOM05D000097 ORTHO05D000041 9.7e-06 55.1 89 38.2


User provided reference genes

Program Settings