Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033120.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.6e-57 225.7 105 100.0
MELO3C008788.2 Cucumis melo HOM05D000995 ORTHO05D001773 4.8e-49 197.6 104 88.5
MELO3C031252.2 Cucumis melo HOM05D000995 ORTHO05D001773 6.1e-36 154.1 93 80.6
Sed0013325 Sechium edule HOM05D000995 ORTHO05D001773 2.1e-20 102.4 104 43.3
Sed0019125 Sechium edule HOM05D000995 ORTHO05D001773 3.0e-19 98.6 104 41.3
ClCG01G016350 Citrullus lanatus HOM05D000995 ORTHO05D001773 9.8e-18 93.6 102 43.1
ClCG02G008520 Citrullus lanatus HOM05D000995 ORTHO05D012510 9.8e-18 93.6 79 58.2
Sed0014458 Sechium edule HOM05D000995 ORTHO05D012510 1.3e-17 93.2 68 61.8
ClCG08G001070 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.4e-16 89.0 98 42.9
MELO3C027312.2 Cucumis melo HOM05D000995 ORTHO05D001773 4.1e-16 88.2 102 42.2
MELO3C000795.2 Cucumis melo HOM05D000995 ORTHO05D001773 5.4e-16 87.8 102 42.2
MELO3C034076.2 Cucumis melo HOM05D000995 ORTHO05D001773 5.4e-16 87.8 98 44.9
ClCG01G008840 Citrullus lanatus HOM05D000995 ORTHO05D001773 7.0e-16 87.4 102 40.2
ClCG02G010500 Citrullus lanatus HOM05D000995 ORTHO05D001773 7.0e-16 87.4 102 41.2
MELO3C026674.2 Cucumis melo HOM05D000995 ORTHO05D001773 2.0e-15 85.9 102 42.2
MELO3C010339.2 Cucumis melo HOM05D000995 ORTHO05D001773 2.7e-15 85.5 102 41.2
ClCG01G012490 Citrullus lanatus HOM05D000995 ORTHO05D001773 3.5e-15 85.1 102 40.2
MELO3C027383.2 Cucumis melo HOM05D000995 ORTHO05D001773 4.5e-15 84.7 102 40.2
MELO3C029387.2 Cucumis melo HOM05D000995 ORTHO05D001773 7.7e-15 84.0 98 42.9
MELO3C025089.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.3e-14 83.2 102 41.2
Hma1.2p1_1193F.1_g265550 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.3e-14 83.2 107 43.0
MELO3C027457.2 Cucumis melo HOM05D000995 ORTHO05D001773 3.8e-14 81.6 102 40.2
Sed0021058 Sechium edule HOM05D000995 ORTHO05D001773 3.8e-14 81.6 91 39.6
ClCG07G007890 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.0e-14 81.3 98 38.8
MELO3C028824.2 Cucumis melo HOM05D000995 ORTHO05D001773 5.0e-14 81.3 97 41.2
Hma1.2p1_2783F.1_g328410 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 8.5e-14 80.5 107 43.0
ClCG09G014960 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.5e-13 79.7 102 37.3
MELO3C033114.2 Cucumis melo HOM05D000995 ORTHO05D001773 2.5e-13 79.0 97 39.2
Hma1.2p1_0120F.1_g057263 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.5e-13 79.0 101 41.6
Hma1.2p1_0161F.1_g071390 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.5e-13 79.0 101 41.6
Hma1.2p1_0663F.1_g198890 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.5e-13 79.0 101 41.6
Hma1.2p1_0663F.1_g198895 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.5e-13 79.0 101 41.6
MELO3C027233.2 Cucumis melo HOM05D000995 ORTHO05D001773 3.2e-13 78.6 102 39.2
MSTRG.26889 Avicennia marina HOM05D000995 ORTHO05D001773 5.5e-13 77.8 93 41.9
Hma1.2p1_0901F.1_g234680 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 7.2e-13 77.4 101 40.6
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-13 77.0 93 38.7
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.5e-13 77.0 93 39.8
Hma1.2p1_0149F.1_g066280 Hydrangea macrophylla HOM05D004781 ORTHO05D001773 1.2e-12 76.6 101 39.6
Hma1.2p1_0054F.1_g031030 Hydrangea macrophylla HOM05D004781 ORTHO05D001773 1.6e-12 76.3 101 40.6
COL.COLO4_20284 Corchorus olitorius HOM05D004781 ORTHO05D001773 2.1e-12 75.9 101 37.6
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.1e-12 75.9 101 39.6
COL.COLO4_14897 Corchorus olitorius HOM05D014876 ORTHO05D001773 2.7e-12 75.5 101 35.6
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.7e-12 75.5 93 39.8
MELO3C000787.2 Cucumis melo HOM05D000995 ORTHO05D001773 3.6e-12 75.1 89 41.6
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 3.6e-12 75.1 91 39.6
SalBow8G2838 Salvia bowleyana HOM05D000995 ORTHO05D001773 3.6e-12 75.1 91 39.6
COL.COLO4_23428 Corchorus olitorius HOM05D004781 ORTHO05D001773 6.1e-12 74.3 101 35.6
Nitab4.5_0000043g0360 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-12 74.3 93 37.6
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 6.1e-12 74.3 92 40.2
COL.COLO4_10628 Corchorus olitorius HOM05D014876 ORTHO05D001773 8.0e-12 73.9 101 35.6
MELO3C032455.2 Cucumis melo HOM05D000995 ORTHO05D001773 8.0e-12 73.9 102 35.3
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 8.0e-12 73.9 91 38.5
SalBow6G1622 Salvia bowleyana HOM05D004781 ORTHO05D001773 8.0e-12 73.9 91 38.5
SalBow6G6357 Salvia bowleyana HOM05D003574 ORTHO05D002175 8.0e-12 73.9 104 36.5
AUR62036109 Chenopodium quinoa HOM05D000995 ORTHO05D001773 1.0e-11 73.6 101 34.7
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-11 73.6 93 36.6
QL02p003670 Quercus lobata HOM05D000995 ORTHO05D001773 1.8e-11 72.8 101 36.6
QL07p017318 Quercus lobata HOM05D000995 ORTHO05D001773 1.8e-11 72.8 101 36.6
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.8e-11 72.8 92 40.2
PGSC0003DMG400043149 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.8e-11 72.8 93 37.6
COL.COLO4_14896 Corchorus olitorius HOM05D014876 ORTHO05D012510 3.0e-11 72.0 101 34.7
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-11 72.0 93 38.7
Actinidia27557 Actinidia chinensis HOM05D021049 ORTHO05D001773 5.2e-11 71.2 98 41.8
COL.COLO4_20277 Corchorus olitorius HOM05D014876 ORTHO05D012510 5.2e-11 71.2 101 34.7
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.2e-11 71.2 93 35.5
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.2e-11 71.2 93 37.6
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.2e-11 71.2 93 37.6
COL.COLO4_29985 Corchorus olitorius HOM05D014876 ORTHO05D012510 6.8e-11 70.9 101 33.7
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 6.8e-11 70.9 93 36.6
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.8e-11 70.9 93 36.6
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 8.8e-11 70.5 93 37.6
EL10Ac7g17946 Beta vulgaris HOM05D000995 ORTHO05D001773 1.2e-10 70.1 104 34.6
Hma1.2p1_1168F.1_g263170 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.2e-10 70.1 93 37.6
QL07p006782 Quercus lobata HOM05D000995 ORTHO05D002620 1.2e-10 70.1 101 35.6
EL10Ac6g15005 Beta vulgaris HOM05D000995 ORTHO05D001773 2.0e-10 69.3 104 34.6
ClCG08G006380 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.0e-10 69.3 86 38.4
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-10 69.3 93 35.5
ClCG02G008620 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.6e-10 68.9 102 35.3
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-10 68.9 93 33.3
Nitab4.5_0007148g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-10 68.6 96 34.4
ClCG10G015790 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.7e-10 67.8 96 37.5
Nitab4.5_0003551g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-10 67.8 93 34.4
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.7e-10 67.8 93 35.5
EL10Ac3g05450 Beta vulgaris HOM05D000995 ORTHO05D001773 7.5e-10 67.4 97 35.1
EL10Ac5g11830 Beta vulgaris HOM05D000995 ORTHO05D001773 7.5e-10 67.4 97 35.1
EL10As7g23760 Beta vulgaris HOM05D000995 ORTHO05D001773 7.5e-10 67.4 97 35.1
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.5e-10 67.4 94 33.0
EL10Ac4g08194 Beta vulgaris HOM05D000995 ORTHO05D001773 9.8e-10 67.0 104 33.7
EL10Ac5g11547 Beta vulgaris HOM05D000995 ORTHO05D001773 9.8e-10 67.0 104 33.7
EL10Ac5g11925 Beta vulgaris HOM05D000995 ORTHO05D001773 9.8e-10 67.0 104 33.7
SalBow5G0102 Salvia bowleyana HOM05D000995 ORTHO05D001773 9.8e-10 67.0 91 38.5
EL10Ac4g08691 Beta vulgaris HOM05D000995 ORTHO05D001773 1.3e-09 66.6 104 32.7
AUR62037973 Chenopodium quinoa HOM05D004781 ORTHO05D001773 1.3e-09 66.6 97 32.0
Nitab4.5_0000841g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-09 66.6 102 36.3
QL04p030586 Quercus lobata HOM05D000995 ORTHO05D001773 1.7e-09 66.2 101 33.7
QL09p028511 Quercus lobata HOM05D000995 ORTHO05D001773 1.7e-09 66.2 101 33.7
QL10p017437 Quercus lobata HOM05D000995 ORTHO05D001773 1.7e-09 66.2 101 33.7
QL10p026410 Quercus lobata HOM05D000995 ORTHO05D001773 1.7e-09 66.2 101 33.7
Rhsim02G0146600 Rhododendron simsii HOM05D000995 ORTHO05D001773 1.7e-09 66.2 100 36.0
Rhsim05G0140400 Rhododendron simsii HOM05D000995 ORTHO05D001773 1.7e-09 66.2 93 41.9
ClCG07G001540 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.2e-09 65.9 98 38.8
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.2e-09 65.9 85 37.6
ClCG11G010690 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.8e-09 65.5 86 36.0
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-09 65.1 98 34.7
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-09 64.7 93 34.4
Rhsim05G0112600 Rhododendron simsii HOM05D000995 ORTHO05D001773 4.9e-09 64.7 93 40.9
ClCG03G010780 Citrullus lanatus HOM05D000995 ORTHO05D001773 6.3e-09 64.3 85 37.6
RhsimUnG0218100 Rhododendron simsii HOM05D000995 ORTHO05D001773 6.3e-09 64.3 100 36.0
ClCG11G011320 Citrullus lanatus HOM05D000995 ORTHO05D001773 8.3e-09 63.9 97 35.1
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.3e-09 63.9 86 37.2
Nitab4.5_0003811g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.3e-09 63.9 87 40.2
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.3e-09 63.9 87 34.5
EL10Ac7g17728 Beta vulgaris HOM05D000995 ORTHO05D001773 1.1e-08 63.5 104 32.7
AUR62035177 Chenopodium quinoa HOM05D004781 ORTHO05D001773 1.4e-08 63.2 93 39.8
Nitab4.5_0000134g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-08 62.8 91 36.3
AUR62027594 Chenopodium quinoa HOM05D000995 ORTHO05D001773 4.1e-08 61.6 101 30.7
AUR62037436 Chenopodium quinoa HOM05D004781 ORTHO05D001773 4.1e-08 61.6 93 38.7
Dinv12862 Davidia involucrata HOM05D008376 ORTHO05D010591 4.1e-08 61.6 104 33.7
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-08 61.2 87 34.5
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.0e-08 60.8 91 36.3
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-08 60.8 85 34.1
EL10Ac7g18058 Beta vulgaris HOM05D004781 ORTHO05D001773 9.2e-08 60.5 92 35.9
Hund04341 Selenicereus undatus HOM05D007953 ORTHO05D009936 1.2e-07 60.1 105 38.1
ClCG10G005780 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.0e-07 59.3 102 32.4
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-07 59.3 91 33.0
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-07 59.3 106 34.9
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-07 59.3 91 34.1
Hund03527 Selenicereus undatus HOM05D007953 ORTHO05D009936 2.0e-07 59.3 94 39.4
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 2.0e-07 59.3 101 35.6
Hund18408 Selenicereus undatus HOM05D007953 ORTHO05D009936 2.7e-07 58.9 94 39.4
AUR62013982 Chenopodium quinoa HOM05D004781 ORTHO05D001773 3.5e-07 58.5 93 37.6
Rhsim09G0065300 Rhododendron simsii HOM05D004781 ORTHO05D001773 3.5e-07 58.5 59 50.8
Hund02727 Selenicereus undatus HOM05D007953 ORTHO05D009936 3.5e-07 58.5 94 39.4
Hund03430 Selenicereus undatus HOM05D008217 ORTHO05D010406 3.5e-07 58.5 97 36.1
Hund08937 Selenicereus undatus HOM05D007953 ORTHO05D009936 3.5e-07 58.5 94 39.4
Hund13489 Selenicereus undatus HOM05D007953 ORTHO05D009936 3.5e-07 58.5 94 39.4
Hund14610 Selenicereus undatus HOM05D008217 ORTHO05D010406 3.5e-07 58.5 97 36.1
Hund25596 Selenicereus undatus HOM05D007953 ORTHO05D009936 3.5e-07 58.5 94 39.4
Hund29669 Selenicereus undatus HOM05D007953 ORTHO05D009936 3.5e-07 58.5 94 39.4
Hund31128 Selenicereus undatus HOM05D007953 ORTHO05D009936 3.5e-07 58.5 94 39.4
Dinv36130 Davidia involucrata HOM05D008376 ORTHO05D010591 4.5e-07 58.2 93 33.3
Hund01653 Selenicereus undatus HOM05D008217 ORTHO05D010406 4.5e-07 58.2 97 36.1
Hund29701 Selenicereus undatus HOM05D008217 ORTHO05D010406 4.5e-07 58.2 97 35.1
EL10Ac1g00951 Beta vulgaris HOM05D000995 ORTHO05D001773 5.9e-07 57.8 92 35.9
EL10Ac6g13855 Beta vulgaris HOM05D004781 ORTHO05D001773 5.9e-07 57.8 92 35.9
EL10Ac6g14812 Beta vulgaris HOM05D004781 ORTHO05D001773 5.9e-07 57.8 92 35.9
EL10Ac9g22875 Beta vulgaris HOM05D004781 ORTHO05D001773 5.9e-07 57.8 92 35.9
Hund01205 Selenicereus undatus HOM05D008217 ORTHO05D010406 5.9e-07 57.8 97 36.1
Hund25839 Selenicereus undatus HOM05D008217 ORTHO05D010406 5.9e-07 57.8 97 36.1
Hund24254 Selenicereus undatus HOM05D008217 ORTHO05D010406 7.7e-07 57.4 97 36.1
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-06 57.0 75 36.0
MELO3C027374.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.3e-06 56.6 68 39.7
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-06 56.6 77 33.8
Hund08788 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.3e-06 56.6 94 37.2
Hund12423 Selenicereus undatus HOM05D007953 ORTHO05D009936 1.3e-06 56.6 94 39.4
Hund17225 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.3e-06 56.6 95 35.8
Hund21297 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.3e-06 56.6 97 36.1
Hund29557 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.3e-06 56.6 97 35.1
Hund24674 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.7e-06 56.2 97 35.1
Hund29568 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.7e-06 56.2 94 37.2
Hund30403 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.7e-06 56.2 97 36.1
EL10Ac6g13965 Beta vulgaris HOM05D004781 ORTHO05D001773 2.9e-06 55.5 92 34.8
Hund18257 Selenicereus undatus HOM05D007953 ORTHO05D009936 2.9e-06 55.5 94 38.3
AUR62017415 Chenopodium quinoa HOM05D004781 ORTHO05D001773 3.8e-06 55.1 93 36.6
Nitab4.5_0007170g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-06 55.1 88 30.7
Hund11116 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-06 55.1 62 43.5
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.8e-06 55.1 92 35.9
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.8e-06 55.1 93 31.2
MBI16_g25488_MAGBIO Magnolia biondii HOM05D000900 ORTHO05D000638 5.0e-06 54.7 60 45.0
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 5.0e-06 54.7 75 34.7
EL10Ac2g03232 Beta vulgaris HOM05D000995 ORTHO05D001773 6.6e-06 54.3 97 28.9
AUR62034806 Chenopodium quinoa HOM05D004781 ORTHO05D001773 6.6e-06 54.3 57 49.1
FAN11G1756 Fragaria x ananassa HOM05D000995 ORTHO05D002620 6.6e-06 54.3 101 31.7
Hund24456 Selenicereus undatus HOM05D008217 ORTHO05D010406 6.6e-06 54.3 97 35.1
MELO3C027709.2 Cucumis melo HOM05D000995 ORTHO05D001773 8.6e-06 53.9 48 50.0
MELO3C035479.2 Cucumis melo HOM05D000995 ORTHO05D001773 8.6e-06 53.9 48 50.0
PGSC0003DMG400044720 Solanum tuberosum HOM05D000995 ORTHO05D001773 8.6e-06 53.9 100 35.0


User provided reference genes

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