Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033117.2 Cucumis melo HOM05D002571 ORTHO05D002868 1.6e-71 272.7 141 100.0
MELO3C028678.2 Cucumis melo HOM05D002571 ORTHO05D002868 9.4e-24 114.0 80 78.8
MELO3C034996.2 Cucumis melo HOM05D004908 ORTHO05D006418 2.0e-13 79.7 58 75.9
MELO3C003413.2 Cucumis melo HOM05D002571 ORTHO05D002868 3.2e-08 62.4 31 93.5
CsaV3_3G049140 Cucumis sativus L. HOM05D002571 ORTHO05D002868 3.2e-08 62.4 31 93.5
ClCG09G011910 Citrullus lanatus HOM05D002571 ORTHO05D002868 7.2e-08 61.2 31 90.3
DCAR_008267 Daucus carota HOM05D002571 ORTHO05D002868 1.6e-07 60.1 31 83.9
TWI60G0924 Tripterygium wilfordii HOM05D002571 ORTHO05D002868 2.7e-07 59.3 31 83.9
MELO3C013850.2 Cucumis melo HOM05D002571 ORTHO05D002868 3.6e-07 58.9 31 83.9
Phvul.003G285000 Phaseolus vulgaris HOM05D002571 ORTHO05D002868 3.6e-07 58.9 31 80.6
VMungo0251G1300 Vigna mungo HOM05D002571 ORTHO05D002868 3.6e-07 58.9 31 80.6
Sed0004634 Sechium edule HOM05D002571 ORTHO05D002868 4.7e-07 58.5 31 83.9
CANSAT21G1855 Cannabis sativa HOM05D002571 ORTHO05D002868 8.0e-07 57.8 31 80.6
Potri.003G092300 Populus trichocarpa HOM05D002571 ORTHO05D002868 8.0e-07 57.8 31 80.6
Sabra03G0061700 Salix brachista HOM05D002571 ORTHO05D002868 8.0e-07 57.8 31 80.6
Sed0004867 Sechium edule HOM05D002571 ORTHO05D002868 8.0e-07 57.8 31 80.6
Sopen08g001090 Solanum pennellii HOM05D002571 ORTHO05D002868 8.0e-07 57.8 31 80.6
PGSC0003DMG400001155 Solanum tuberosum HOM05D002571 ORTHO05D002868 8.0e-07 57.8 31 80.6
TWI15G0324 Tripterygium wilfordii HOM05D002571 ORTHO05D002868 8.0e-07 57.8 31 80.6
TWI81G0900 Tripterygium wilfordii HOM05D002571 ORTHO05D002868 8.0e-07 57.8 31 80.6
Glyma.01G096300 Glycine max HOM05D002571 ORTHO05D002868 1.0e-06 57.4 31 80.6
Glyma.08G271700 Glycine max HOM05D002571 ORTHO05D002868 1.0e-06 57.4 31 80.6
Lj4g0023696 Lotus japonicus HOM05D002571 ORTHO05D002868 1.4e-06 57.0 31 80.6
TAR636G2406 Trochodendron aralioides HOM05D002571 ORTHO05D002868 1.4e-06 57.0 31 83.9
ECA240G1797 Erigeron canadensis HOM05D002571 ORTHO05D002868 1.8e-06 56.6 31 77.4
Potri.001G142100 Populus trichocarpa HOM05D002571 ORTHO05D002868 1.8e-06 56.6 31 77.4
PGR031G1083 Punica granatum HOM05D002571 ORTHO05D002868 1.8e-06 56.6 31 77.4
Sabra01G0110500 Salix brachista HOM05D002571 ORTHO05D002868 1.8e-06 56.6 31 77.4
THA.LOC104806707 Tarenaya hassleriana HOM05D002571 ORTHO05D002868 1.8e-06 56.6 31 80.6
TPR.G28246 Trifolium pratense HOM05D002571 ORTHO05D002868 1.8e-06 56.6 31 80.6
Haze_08225 Corylus avellana HOM05D002571 ORTHO05D002868 2.3e-06 56.2 31 77.4
Dinv28960 Davidia involucrata HOM05D002571 ORTHO05D002868 2.3e-06 56.2 31 77.4
Lsat_1_v5_gn_6_79321 Lactuca sativa HOM05D002571 ORTHO05D002868 2.3e-06 56.2 31 77.4
Medtr8g067080 Medicago truncatula HOM05D002571 ORTHO05D002868 2.3e-06 56.2 31 80.6
Medtr8g471110 Medicago truncatula HOM05D002571 ORTHO05D002868 2.3e-06 56.2 31 80.6
TAR374G1691 Trochodendron aralioides HOM05D002571 ORTHO05D002868 2.3e-06 56.2 31 77.4
Aa31LG6G620 Aethionema arabicum HOM05D002571 ORTHO05D002868 3.0e-06 55.8 31 77.4
Ca_22644_v3 Cicer arietinum L. HOM05D002571 ORTHO05D002868 3.0e-06 55.8 31 80.6
Ciclev10013257m.g Citrus clementina HOM05D002571 ORTHO05D002868 3.0e-06 55.8 31 77.4
Dinv25217 Davidia involucrata HOM05D002571 ORTHO05D002868 3.0e-06 55.8 31 74.2
Lj4g0026282 Lotus japonicus HOM05D002571 ORTHO05D002868 3.0e-06 55.8 31 77.4
Solyc08g005070.4 Solanum lycopersicum HOM05D002571 ORTHO05D002868 3.0e-06 55.8 31 77.4
Actinidia14805 Actinidia chinensis HOM05D002571 ORTHO05D002868 4.0e-06 55.5 29 82.8
CiPaw.11G093700 Carya illinoinensis HOM05D002571 ORTHO05D002868 4.0e-06 55.5 31 77.4
CsaV3_3G001690 Cucumis sativus L. HOM05D002571 ORTHO05D002868 4.0e-06 55.5 31 77.4
Psat0s2661g0080 Pisum sativum HOM05D002571 ORTHO05D002868 4.0e-06 55.5 31 77.4
Sc22g0001520 Simmondsia chinensis HOM05D002571 ORTHO05D002868 4.0e-06 55.5 31 74.2
Eucgr.D02202 Eucalyptus grandis HOM05D002571 ORTHO05D002868 5.2e-06 55.1 31 77.4
Hma1.2p1_1063F.1_g253590 Hydrangea macrophylla HOM05D002571 ORTHO05D002868 5.2e-06 55.1 31 77.4
Hma1.2p1_1794F.1_g302660 Hydrangea macrophylla HOM05D002571 ORTHO05D002868 5.2e-06 55.1 31 77.4
Manes.15G181201 Manihot esculenta HOM05D002571 ORTHO05D002868 5.2e-06 55.1 31 74.2
Nn6g33584 Nelumbo nucifera HOM05D002571 ORTHO05D002868 5.2e-06 55.1 31 74.2
Phvul.002G141400 Phaseolus vulgaris HOM05D002571 ORTHO05D002868 5.2e-06 55.1 31 77.4
Sed0011678 Sechium edule HOM05D002571 ORTHO05D002868 5.2e-06 55.1 31 77.4
TAR375G0261 Trochodendron aralioides HOM05D002571 ORTHO05D002868 5.2e-06 55.1 31 77.4
EL10Ac5g12116 Beta vulgaris HOM05D002571 ORTHO05D002868 6.7e-06 54.7 31 71.0
CiPaw.12G064100 Carya illinoinensis HOM05D002571 ORTHO05D002868 6.7e-06 54.7 31 77.4
Cc08_g02800 Coffea canephora HOM05D002571 ORTHO05D002868 6.7e-06 54.7 31 71.0
Gohir.D09G193300 Gossypium hirsutum HOM05D002571 ORTHO05D002868 6.7e-06 54.7 29 82.8
Psat4g121160 Pisum sativum HOM05D002571 ORTHO05D002868 6.7e-06 54.7 31 77.4
THA.LOC104812831 Tarenaya hassleriana HOM05D002571 ORTHO05D002868 6.7e-06 54.7 31 77.4
GSVIVG01013155001 Vitis vinifera HOM05D002571 ORTHO05D002868 6.7e-06 54.7 31 74.2
Actinidia09192 Actinidia chinensis HOM05D002571 ORTHO05D002868 8.8e-06 54.3 29 79.3
FvH4_5g22130 Fragaria vesca HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 77.4
FAN04G1146 Fragaria x ananassa HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 77.4
FAN08G0866 Fragaria x ananassa HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 77.4
FAN13G2715 Fragaria x ananassa HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 77.4
FAN18G0316 Fragaria x ananassa HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 77.4
Lalb_Chr16g0381351 Lupinus albus HOM05D002571 ORTHO05D002868 8.8e-06 54.3 30 73.3
Medtr8g067090 Medicago truncatula HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 74.2
Medtr8g471120 Medicago truncatula HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 74.2
Oeu039360.2 Olea europaea HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 71.0
Prupe.5G035300 Prunus persica HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 77.4
RcHm_v2.0_Chr7g0209771 Rosa chinensis HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 77.4
Sp7g16230 Schrenkiella parvula HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 71.0
TPR.G28244 Trifolium pratense HOM05D002571 ORTHO05D002868 8.8e-06 54.3 31 74.2


User provided reference genes

Program Settings