Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033022.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.1e-36 156.0 72 100.0
MELO3C027159.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.8e-30 133.7 68 91.2
MELO3C027711.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.2e-29 131.7 68 89.7
MELO3C027673.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.4e-28 129.0 68 85.3
MELO3C000086.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.5e-28 128.3 68 88.2
MELO3C027326.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.5e-28 127.1 68 85.3
MELO3C027426.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.1e-26 120.6 68 86.8
MELO3C031271.2 Cucumis melo HOM05D000176 ORTHO05D000106 7.4e-25 116.7 56 94.6
CsaV3_1G024380 Cucumis sativus L. HOM05D000176 ORTHO05D000106 4.8e-24 114.0 68 76.5
CsaV3_6G016110 Cucumis sativus L. HOM05D000176 ORTHO05D000106 4.8e-24 114.0 68 76.5
MELO3C027567.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.2e-22 109.4 57 89.5
CsaV3_5G039840 Cucumis sativus L. HOM05D000176 ORTHO05D000106 3.0e-18 94.7 66 63.6
MELO3C031741.2 Cucumis melo HOM05D000176 ORTHO05D000106 6.7e-18 93.6 52 82.7
MELO3C033156.2 Cucumis melo HOM05D000176 ORTHO05D000106 8.7e-18 93.2 57 77.2
MELO3C033541.2 Cucumis melo HOM05D000176 ORTHO05D000106 8.7e-18 93.2 66 63.6
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 3.4e-14 81.3 67 58.2
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 3.4e-14 81.3 67 58.2
QL03p030217 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-14 80.9 67 59.7
QL07p004315 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-14 80.9 67 58.2
QL09p009005 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-14 80.9 67 58.2
QL93p0107_0380 Quercus lobata HOM05D000370 ORTHO05D001335 4.5e-14 80.9 67 58.2
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 7.7e-14 80.1 66 56.1
QL04p053141 Quercus lobata HOM05D000176 ORTHO05D000106 7.7e-14 80.1 67 58.2
QL04p066053 Quercus lobata HOM05D000176 ORTHO05D000106 7.7e-14 80.1 67 58.2
QL05p078397 Quercus lobata HOM05D000070 ORTHO05D000106 7.7e-14 80.1 67 58.2
QL06p040368 Quercus lobata HOM05D000176 ORTHO05D000106 7.7e-14 80.1 67 58.2
QL12p023375 Quercus lobata HOM05D000176 ORTHO05D000106 7.7e-14 80.1 67 58.2
QL12p031843 Quercus lobata HOM05D000176 ORTHO05D000106 7.7e-14 80.1 67 58.2
QL93p0164_0014 Quercus lobata HOM05D000176 ORTHO05D000106 7.7e-14 80.1 67 58.2
MELO3C033104.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.0e-13 79.7 44 81.8
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 1.3e-13 79.3 67 58.2
QL09p008289 Quercus lobata HOM05D001043 ORTHO05D000106 1.3e-13 79.3 67 58.2
QL03p015444 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-13 79.0 67 58.2
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-13 79.0 67 58.2
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-13 79.0 67 58.2
QL93p2017_0003 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-13 79.0 67 58.2
QL02p000127 Quercus lobata HOM05D003289 ORTHO05D004594 2.2e-13 78.6 67 56.7
QL12p004084 Quercus lobata HOM05D000176 ORTHO05D000106 2.2e-13 78.6 67 56.7
QL01p023632 Quercus lobata HOM05D000176 ORTHO05D000106 3.8e-13 77.8 67 58.2
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 3.8e-13 77.8 67 56.7
QL02p053683 Quercus lobata HOM05D000176 ORTHO05D000106 5.0e-13 77.4 67 55.2
QL03p014985 Quercus lobata HOM05D001365 ORTHO05D001291 5.0e-13 77.4 67 53.7
QL08p003473 Quercus lobata HOM05D000176 ORTHO05D005465 5.0e-13 77.4 67 56.7
QL09p040375 Quercus lobata HOM05D000176 ORTHO05D000106 5.0e-13 77.4 67 56.7
MELO3C034284.2 Cucumis melo HOM05D000176 ORTHO05D000106 6.5e-13 77.0 38 92.1
QL05p088131 Quercus lobata HOM05D000176 ORTHO05D000106 2.5e-12 75.1 68 54.4
QL06p043010 Quercus lobata HOM05D000529 ORTHO05D000472 2.5e-12 75.1 68 54.4
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 2.5e-12 75.1 68 54.4
QL02p018295 Quercus lobata HOM05D000176 ORTHO05D000106 3.2e-12 74.7 68 54.4
QL11p043362 Quercus lobata HOM05D000176 ORTHO05D000106 3.2e-12 74.7 68 54.4
QL05p087728 Quercus lobata HOM05D000176 ORTHO05D000106 1.2e-11 72.8 62 58.1
Aa31LG10G5620 Aethionema arabicum HOM05D000176 ORTHO05D003511 2.7e-11 71.6 66 50.0
QL01p024632 Quercus lobata HOM05D000176 ORTHO05D000106 4.6e-11 70.9 53 58.5
QL02p062649 Quercus lobata HOM05D000176 ORTHO05D000106 4.6e-11 70.9 67 53.7
QL05p049475 Quercus lobata HOM05D000176 ORTHO05D000106 4.6e-11 70.9 67 53.7
QL12p036511 Quercus lobata HOM05D000176 ORTHO05D000106 4.6e-11 70.9 67 53.7
AT1G48120 Arabidopsis thaliana HOM05D000176 ORTHO05D003511 6.1e-11 70.5 68 48.5
A06p04680 Brassica napus HOM05D000176 ORTHO05D003511 6.1e-11 70.5 68 50.0
C06p02530 Brassica napus HOM05D000176 ORTHO05D003511 6.1e-11 70.5 68 50.0
BolC6t35381H Brassica oleracea HOM05D000176 ORTHO05D003511 6.1e-11 70.5 68 50.0
BraA06t23671Z Brassica rapa HOM05D000176 ORTHO05D003511 6.1e-11 70.5 68 50.0
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 6.1e-11 70.5 67 53.7
QL09p003987 Quercus lobata HOM05D000176 ORTHO05D003511 1.4e-10 69.3 66 53.0
Sp1g35090 Schrenkiella parvula HOM05D000176 ORTHO05D003511 1.4e-10 69.3 66 50.0
CARHR037760 Cardamine hirsuta HOM05D000176 ORTHO05D003511 1.8e-10 68.9 66 50.0
MELO3C029627.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.8e-10 68.9 50 66.0
Thhalv10011184m.g Eutrema salsugineum HOM05D000176 ORTHO05D003511 1.8e-10 68.9 66 50.0
THA.LOC104802612 Tarenaya hassleriana HOM05D000176 ORTHO05D003511 1.8e-10 68.9 66 50.0
QL05p061244 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-10 68.6 67 49.3
QL09p045979 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-10 68.6 66 48.5
QL10p058474 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-10 68.6 67 49.3
AL1G54690 Arabidopsis lyrata HOM05D000176 ORTHO05D003511 3.0e-10 68.2 66 48.5
QL03p060265 Quercus lobata HOM05D000176 ORTHO05D000106 3.0e-10 68.2 67 50.7
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 3.0e-10 68.2 67 49.3
QL10p054240 Quercus lobata HOM05D000176 ORTHO05D000106 3.0e-10 68.2 67 50.7
QL05p083456 Quercus lobata HOM05D000176 ORTHO05D000106 3.9e-10 67.8 66 47.0
SHI45281 Sapria himalayana HOM05D000176 ORTHO05D000106 3.9e-10 67.8 68 45.6
QL08p063032 Quercus lobata HOM05D002302 ORTHO05D002728 5.1e-10 67.4 66 45.5
Carub.0001s3722 Capsella rubella HOM05D000176 ORTHO05D003511 6.7e-10 67.0 66 50.0
QL02p042411 Quercus lobata HOM05D002707 ORTHO05D002925 6.7e-10 67.0 68 50.0
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 6.7e-10 67.0 67 49.3
QL11p029083 Quercus lobata HOM05D000176 ORTHO05D000106 6.7e-10 67.0 66 50.0
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 8.8e-10 66.6 66 51.5
QL01p028314 Quercus lobata HOM05D000176 ORTHO05D000106 8.8e-10 66.6 61 52.5
QL11p007847 Quercus lobata HOM05D002083 ORTHO05D000332 8.8e-10 66.6 67 49.3
QL02p071405 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-09 66.2 66 45.5
QL03p000009 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-09 66.2 67 49.3
QL09p020558 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-09 66.2 66 45.5
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-09 66.2 66 45.5
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.5e-09 65.9 66 51.5
Rhsim03G0028500 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.5e-09 65.9 65 50.8
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 2.0e-09 65.5 63 49.2
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 2.0e-09 65.5 65 46.2
DCAR_030358 Daucus carota HOM05D000176 ORTHO05D000106 2.5e-09 65.1 67 43.3
QL02p103239 Quercus lobata HOM05D000176 ORTHO05D000106 2.5e-09 65.1 65 47.7
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 3.3e-09 64.7 63 50.8
QL08p031423 Quercus lobata HOM05D000176 ORTHO05D009654 3.3e-09 64.7 66 47.0
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 4.3e-09 64.3 51 60.8
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 5.7e-09 63.9 66 42.4
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 7.4e-09 63.5 67 47.8
QL11p013596 Quercus lobata HOM05D000176 ORTHO05D000106 7.4e-09 63.5 66 48.5
Lj1g0015263 Lotus japonicus HOM05D000176 ORTHO05D000106 9.7e-09 63.2 67 46.3
Cc03_g09280 Coffea canephora HOM05D000176 ORTHO05D000106 1.3e-08 62.8 70 44.3
Cc03_g15850 Coffea canephora HOM05D000176 ORTHO05D000106 1.7e-08 62.4 70 41.4
QL10p044969 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-08 62.4 53 56.6
SHI06307 Sapria himalayana HOM05D002876 ORTHO05D000106 3.7e-08 61.2 66 43.9
Sed0010925 Sechium edule HOM05D000176 ORTHO05D000106 3.7e-08 61.2 68 47.1
QL07p006103 Quercus lobata HOM05D000176 ORTHO05D000106 6.3e-08 60.5 53 52.8
QL11p038845 Quercus lobata HOM05D000176 ORTHO05D000106 6.3e-08 60.5 53 58.5
QL93p0073_0666 Quercus lobata HOM05D003637 ORTHO05D004175 6.3e-08 60.5 53 52.8
MELO3C029097.2 Cucumis melo HOM05D000176 ORTHO05D000106 8.2e-08 60.1 32 84.4
Oeu017988.1 Olea europaea HOM05D000176 ORTHO05D000106 8.2e-08 60.1 66 43.9
Cc05_g12610 Coffea canephora HOM05D000176 ORTHO05D000106 1.4e-07 59.3 65 43.1
Lj1g0006892 Lotus japonicus HOM05D000176 ORTHO05D000106 1.4e-07 59.3 57 49.1
Sopen12g002060 Solanum pennellii HOM05D000176 ORTHO05D003511 1.8e-07 58.9 67 43.3
MELO3C034844.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.4e-07 58.5 33 75.8
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 2.4e-07 58.5 66 43.9
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.1e-07 58.2 66 43.9
CSS0042023 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.1e-07 58.2 66 43.9
Oeu049412.1 Olea europaea HOM05D000176 ORTHO05D000106 3.1e-07 58.2 66 40.9
Oeu049415.1 Olea europaea HOM05D000176 ORTHO05D000106 3.1e-07 58.2 66 40.9
Sed0027921 Sechium edule HOM05D012029 ORTHO05D014680 3.1e-07 58.2 68 44.1
Solyc12g006100.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.1e-07 58.2 67 43.3
ClCG01G008600 Citrullus lanatus HOM05D000176 ORTHO05D000106 4.1e-07 57.8 51 54.9
TWI31G0542 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 4.1e-07 57.8 59 45.8
TWI75G1856 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 4.1e-07 57.8 59 45.8
Cc00_g20850 Coffea canephora HOM05D000176 ORTHO05D000106 5.3e-07 57.4 70 40.0
Cc08_g06590 Coffea canephora HOM05D000176 ORTHO05D000106 5.3e-07 57.4 70 40.0
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 43.9
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 42.4
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 42.4
CSS0018283 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 43.9
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 43.9
CSS0024646 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 43.9
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 43.9
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 42.4
CSS0038560 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 42.4
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.9e-07 57.0 66 42.4
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-07 56.6 66 42.4
CSS0049971 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-07 56.6 66 42.4
QL05p030453 Quercus lobata HOM05D000176 ORTHO05D000106 9.1e-07 56.6 55 45.5
SGA_v2.0_scaffold42G15967 Striga asiatica HOM05D000176 ORTHO05D000106 9.1e-07 56.6 66 40.9
TWI75G0639 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 9.1e-07 56.6 61 42.6
TWI09G0559 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 1.2e-06 56.2 59 44.1
Cc11_g07930 Coffea canephora HOM05D000176 ORTHO05D000106 1.5e-06 55.8 70 38.6
Lj4g0008099 Lotus japonicus HOM05D000176 ORTHO05D000106 1.5e-06 55.8 55 47.3
CSS0010546 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.0e-06 55.5 63 44.4
Cc00_g31110 Coffea canephora HOM05D000176 ORTHO05D000106 2.6e-06 55.1 68 39.7
QL03p011779 Quercus lobata HOM05D000176 ORTHO05D000106 2.6e-06 55.1 66 47.0
Cc00_g16850 Coffea canephora HOM05D000176 ORTHO05D000106 4.5e-06 54.3 70 38.6
QL04p015528 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-06 54.3 58 44.8
QL05p044352 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-06 54.3 58 44.8
QL05p061710 Quercus lobata HOM05D010675 ORTHO05D014145 4.5e-06 54.3 58 44.8
QL05p088783 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-06 54.3 58 44.8
QL07p012019 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-06 54.3 58 44.8
QL08p003348 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-06 54.3 58 44.8
QL08p007762 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-06 54.3 58 44.8
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 4.5e-06 54.3 58 44.8
MSTRG.13026 Avicennia marina HOM05D000176 ORTHO05D000106 5.9e-06 53.9 66 39.4
MELO3C034819.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.9e-06 53.9 27 92.6
Rhsim10G0079000 Rhododendron simsii HOM05D000176 ORTHO05D003511 7.7e-06 53.5 68 41.2


User provided reference genes

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