Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032928.2 Cucumis melo HOM05D006039 ORTHO05D006797 2.5e-113 412.1 213 100.0
MELO3C003056.2 Cucumis melo HOM05D006039 ORTHO05D006797 6.4e-16 88.6 182 40.7
MELO3C014616.2 Cucumis melo HOM05D006039 ORTHO05D006797 1.0e-13 81.3 81 56.8
CsaV3_4G024070 Cucumis sativus L. HOM05D006039 ORTHO05D006797 1.1e-12 77.8 81 56.8
Sed0010144 Sechium edule HOM05D006039 ORTHO05D006797 4.3e-12 75.9 81 54.3
ClCG02G023440 Citrullus lanatus HOM05D006039 ORTHO05D006797 4.7e-11 72.4 81 51.9
Duzib150G0354 Durio zibethinus HOM05D006039 ORTHO05D006797 1.8e-10 70.5 51 68.6
Thecc.09G226300 Theobroma cacao HOM05D006039 ORTHO05D006797 1.2e-09 67.8 51 64.7
MELO3C034424.2 Cucumis melo HOM05D012884 ORTHO05D166910 1.5e-09 67.4 31 96.8
Duzib168G2100 Durio zibethinus HOM05D006039 ORTHO05D006797 5.8e-09 65.5 70 50.0
Gohir.D13G219700 Gossypium hirsutum HOM05D006039 ORTHO05D006797 7.5e-09 65.1 51 60.8
Gohir.A13G216000 Gossypium hirsutum HOM05D006039 ORTHO05D006797 1.7e-08 63.9 51 60.8
CANSAT54G2219 Cannabis sativa HOM05D006039 ORTHO05D006797 2.2e-08 63.5 69 49.3
COL.COLO4_24829 Corchorus olitorius HOM05D006039 ORTHO05D006797 2.9e-08 63.2 65 49.2
Cfa009721 Carpinus fangiana HOM05D006039 ORTHO05D006797 3.7e-08 62.8 67 49.3
Cpa.g.sc84.90 Carica papaya HOM05D006039 ORTHO05D006797 1.4e-07 60.8 98 40.8
Haze_23073 Corylus avellana HOM05D006039 ORTHO05D006797 1.4e-07 60.8 67 47.8
Manes.06G167800 Manihot esculenta HOM05D006039 ORTHO05D006797 2.4e-07 60.1 51 58.8
TWI32G0154 Tripterygium wilfordii HOM05D006039 ORTHO05D006797 2.4e-07 60.1 65 49.2
Phvul.L011043 Phaseolus vulgaris HOM05D006039 ORTHO05D006797 4.1e-07 59.3 65 46.2
VMungo1080G1590 Vigna mungo HOM05D006039 ORTHO05D006797 4.1e-07 59.3 108 36.1
Ciclev10014934m.g Citrus clementina HOM05D006039 ORTHO05D006797 5.4e-07 58.9 66 47.0
Sp6g31030 Schrenkiella parvula HOM05D006039 ORTHO05D006797 5.4e-07 58.9 67 46.3
CiPaw.14G122300 Carya illinoinensis HOM05D006039 ORTHO05D006797 7.1e-07 58.5 51 56.9
Lj1C361T2 Lonicera japonica HOM05D006039 ORTHO05D006797 7.1e-07 58.5 80 40.0
THA.LOC104804971 Tarenaya hassleriana HOM05D006039 ORTHO05D006797 7.1e-07 58.5 64 46.9
vmacro12713 Vaccinium macrocarpon HOM05D006039 ORTHO05D006797 7.1e-07 58.5 65 46.2
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 9.2e-07 58.2 65 44.6
GSVIVG01025314001 Vitis vinifera HOM05D006039 ORTHO05D006797 9.2e-07 58.2 112 38.4
Atru.chr3.2554 Acer truncatum HOM05D006039 ORTHO05D006797 1.2e-06 57.8 98 37.8
AL6G23500 Arabidopsis lyrata HOM05D006039 ORTHO05D006797 1.6e-06 57.4 80 42.5
Eucgr.B03667 Eucalyptus grandis HOM05D006039 ORTHO05D006797 1.6e-06 57.4 108 36.1
Lsat_1_v5_gn_1_67181 Lactuca sativa HOM05D006039 ORTHO05D006797 1.6e-06 57.4 79 45.6
Solyc11g056640.3 Solanum lycopersicum HOM05D006039 ORTHO05D006797 1.6e-06 57.4 84 42.9
CARHR200520 Cardamine hirsuta HOM05D006039 ORTHO05D006797 2.7e-06 56.6 68 45.6
Prupe.6G022100 Prunus persica HOM05D006039 ORTHO05D006797 2.7e-06 56.6 97 37.1
Carub.0006s1111 Capsella rubella HOM05D006039 ORTHO05D006797 3.5e-06 56.2 86 43.0
Glyma.13G341800 Glycine max HOM05D006039 ORTHO05D006797 6.0e-06 55.5 66 47.0
Glyma.15G032500 Glycine max HOM05D006039 ORTHO05D006797 6.0e-06 55.5 84 39.3
Rhsim01G0190000 Rhododendron simsii HOM05D006039 ORTHO05D006797 6.0e-06 55.5 96 39.6
AT5G12930 Arabidopsis thaliana HOM05D006039 ORTHO05D006797 7.8e-06 55.1 67 43.3
MD11G1028000 Malus domestica HOM05D006039 ORTHO05D006797 7.8e-06 55.1 86 36.0


User provided reference genes

Program Settings