Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032917.2 Cucumis melo HOM05D004361 ORTHO05D004706 1.0e-88 330.1 177 100.0
CsaV3_6G049270 Cucumis sativus L. HOM05D004361 ORTHO05D004706 1.8e-72 276.2 178 85.4
ClCG01G022190 Citrullus lanatus HOM05D004361 ORTHO05D004706 3.1e-48 195.7 165 69.7
Sed0009826 Sechium edule HOM05D004361 ORTHO05D004706 4.2e-21 105.5 167 44.9
Sed0010653 Sechium edule HOM05D004361 ORTHO05D004706 1.7e-14 83.6 178 36.0
Sed0011498 Sechium edule HOM05D004361 ORTHO05D004706 3.8e-14 82.4 167 37.1
CsaV3_1G011080 Cucumis sativus L. HOM05D004361 ORTHO05D004706 4.2e-13 79.0 172 33.7
Peaxi162Scf00678g00313 Petunia axillaris HOM05D004361 ORTHO05D004706 4.2e-13 79.0 162 35.2
COL.COLO4_31721 Corchorus olitorius HOM05D004361 ORTHO05D004706 7.2e-13 78.2 201 34.8
ClCG03G005000 Citrullus lanatus HOM05D004361 ORTHO05D004706 9.3e-13 77.8 170 34.1
FvH4_3g02690 Fragaria vesca HOM05D004361 ORTHO05D004706 1.2e-12 77.4 186 33.3
FAN21G0156 Fragaria x ananassa HOM05D004361 ORTHO05D004706 1.2e-12 77.4 186 33.3
FAN25G3407 Fragaria x ananassa HOM05D004361 ORTHO05D004706 1.2e-12 77.4 167 34.7
Lalb_Chr02g0144581 Lupinus albus HOM05D004361 ORTHO05D004706 1.2e-12 77.4 198 35.4
PGR004G2667 Punica granatum HOM05D004361 ORTHO05D004706 1.6e-12 77.0 161 33.5
Manes.16G012800 Manihot esculenta HOM05D004361 ORTHO05D004706 2.7e-12 76.3 199 34.7
Duzib235G0682 Durio zibethinus HOM05D004361 ORTHO05D004706 3.5e-12 75.9 169 34.3
Duzib192G0487 Durio zibethinus HOM05D004361 ORTHO05D004706 4.6e-12 75.5 164 34.1
Nitab4.5_0001686g0040 Nicotiana tabacum HOM05D004361 ORTHO05D004706 1.0e-11 74.3 173 35.8
MELO3C002485.2 Cucumis melo HOM05D004361 ORTHO05D004706 1.3e-11 73.9 175 32.6
Gorai.010G176700 Gossypium raimondii HOM05D004361 ORTHO05D004706 2.3e-11 73.2 171 33.3
Glyma.20G141000 Glycine max HOM05D004361 ORTHO05D004706 3.0e-11 72.8 181 36.5
Gohir.D06G151500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 3.0e-11 72.8 171 33.3
VMungo0720G0988 Vigna mungo HOM05D004361 ORTHO05D004706 3.0e-11 72.8 171 38.6
Glyma.10G252400 Glycine max HOM05D004361 ORTHO05D004706 3.9e-11 72.4 176 37.5
Gohir.A06G145600 Gossypium hirsutum HOM05D004361 ORTHO05D004706 6.7e-11 71.6 171 33.3
Nitab4.5_0006795g0040 Nicotiana tabacum HOM05D004361 ORTHO05D004706 6.7e-11 71.6 165 35.8
CiPaw.09G086700 Carya illinoinensis HOM05D004361 ORTHO05D004706 1.9e-10 70.1 188 38.3
Gohir.A06G208100 Gossypium hirsutum HOM05D004361 ORTHO05D004706 1.9e-10 70.1 186 31.7
Nitab4.5_0002847g0010 Nicotiana tabacum HOM05D004361 ORTHO05D004706 2.5e-10 69.7 179 35.2
Gohir.D06G213000 Gossypium hirsutum HOM05D004361 ORTHO05D004706 3.3e-10 69.3 186 32.8
MD10G1314300 Malus domestica HOM05D004361 ORTHO05D004706 3.3e-10 69.3 190 34.7
Phvul.007G051800 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 3.3e-10 69.3 193 35.8
Glyma.11G003100 Glycine max HOM05D004361 ORTHO05D004706 5.7e-10 68.6 170 38.2
Actinidia05535 Actinidia chinensis HOM05D004361 ORTHO05D004706 7.4e-10 68.2 174 34.5
Manes.17G034800 Manihot esculenta HOM05D004361 ORTHO05D004706 7.4e-10 68.2 171 34.5
Potri.011G026900 Populus trichocarpa HOM05D004361 ORTHO05D004706 9.7e-10 67.8 170 38.2
CAN.G569.44 Capsicum annuum HOM05D004361 ORTHO05D004706 1.6e-09 67.0 169 34.9
Sabra04G0012700 Salix brachista HOM05D004361 ORTHO05D004706 1.6e-09 67.0 167 35.9
Solyc02g080110.3 Solanum lycopersicum HOM05D004361 ORTHO05D004706 2.8e-09 66.2 164 33.5
Peaxi162Scf00082g00177 Petunia axillaris HOM05D004361 ORTHO05D004706 3.7e-09 65.9 167 30.5
Cpa.g.sc198.2 Carica papaya HOM05D004361 ORTHO05D004706 4.8e-09 65.5 173 34.7
Sopen02g024830 Solanum pennellii HOM05D004361 ORTHO05D004706 6.3e-09 65.1 164 32.9
GSVIVG01012625001 Vitis vinifera HOM05D004361 ORTHO05D004706 6.3e-09 65.1 167 38.3
MSTRG.15964 Avicennia marina HOM05D004361 ORTHO05D004706 8.2e-09 64.7 161 37.9
MD05G1340800 Malus domestica HOM05D004361 ORTHO05D004706 8.2e-09 64.7 169 31.4
CSS0034427 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 1.1e-08 64.3 165 33.3
Medtr1g105555 Medicago truncatula HOM05D004361 ORTHO05D004706 1.1e-08 64.3 200 34.0
arahy.Tifrunner.gnm1.ann1.F31F99 Arachis hypogaea HOM05D004361 ORTHO05D004706 1.8e-08 63.5 174 34.5
Potri.004G023000 Populus trichocarpa HOM05D004361 ORTHO05D004706 3.1e-08 62.8 197 33.5
PGSC0003DMG400002067 Solanum tuberosum HOM05D004361 ORTHO05D004706 5.3e-08 62.0 176 31.8
Dinv17836 Davidia involucrata HOM05D004361 ORTHO05D004706 6.9e-08 61.6 170 36.5
Lj1g0002529 Lotus japonicus HOM05D004361 ORTHO05D004706 6.9e-08 61.6 190 32.1
Migut.M01277 Erythranthe guttata HOM05D004361 ORTHO05D004706 1.2e-07 60.8 163 35.6
Glyma.01G240500 Glycine max HOM05D004361 ORTHO05D004706 1.2e-07 60.8 196 35.2
Phvul.002G049100 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 1.2e-07 60.8 201 32.8
TWI38G0935 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 1.2e-07 60.8 167 32.3
Lj5g0000713 Lotus japonicus HOM05D004361 ORTHO05D004706 1.5e-07 60.5 170 36.5
Psat6g210400 Pisum sativum HOM05D004361 ORTHO05D004706 2.0e-07 60.1 192 32.3
Sc05g0008860 Simmondsia chinensis HOM05D004361 ORTHO05D004706 3.4e-07 59.3 160 33.8
vmacro03710 Vaccinium macrocarpon HOM05D004361 ORTHO05D004706 3.4e-07 59.3 171 40.4
Prupe.4G026600 Prunus persica HOM05D004361 ORTHO05D004706 4.5e-07 58.9 172 31.4
VMungo1215G1007 Vigna mungo HOM05D004361 ORTHO05D004706 4.5e-07 58.9 191 34.6
CANSAT56G2280 Cannabis sativa HOM05D004361 ORTHO05D004706 7.7e-07 58.2 166 37.3
Actinidia14236 Actinidia chinensis HOM05D004361 ORTHO05D004706 1.0e-06 57.8 173 36.4
CSS0045436 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 1.0e-06 57.8 175 34.9
Hma1.2p1_0091F.1_g046140 Hydrangea macrophylla HOM05D004361 ORTHO05D004706 1.3e-06 57.4 161 36.6
Actinidia26950 Actinidia chinensis HOM05D004361 ORTHO05D004706 2.9e-06 56.2 137 35.0
Actinidia11836 Actinidia chinensis HOM05D004361 ORTHO05D004706 5.0e-06 55.5 169 33.7
CiPaw.10G068100 Carya illinoinensis HOM05D004361 ORTHO05D004706 6.5e-06 55.1 164 39.0
Psat4g215200 Pisum sativum HOM05D004361 ORTHO05D004706 8.5e-06 54.7 186 33.9


User provided reference genes

Program Settings