Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032765.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.9e-158 560.1 283 100.0
MELO3C000067.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.0e-125 451.4 255 90.6
MELO3C035129.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.6e-99 366.7 262 77.1
MELO3C030915.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.0e-98 364.0 248 78.2
MELO3C034500.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.7e-96 355.5 274 71.2
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.5e-94 348.6 258 74.8
MELO3C029556.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.6e-89 332.8 248 73.8
MELO3C035597.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.3e-88 330.5 251 72.5
MELO3C029126.2 Cucumis melo HOM05D007110 ORTHO05D000592 7.8e-86 321.2 223 77.6
MELO3C035035.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.5e-84 314.3 174 90.8
MELO3C034519.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-68 264.2 140 93.6
MELO3C029129.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.6e-67 260.4 151 88.1
MELO3C027432.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.1e-67 260.0 257 60.3
MELO3C030140.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.4e-56 221.9 251 55.0
MELO3C028456.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.5e-52 209.9 117 91.5
MELO3C027996.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.2e-51 205.3 190 61.6
MELO3C031851.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.4e-50 204.1 174 64.9
CsaV3_3G020500 Cucumis sativus L. HOM05D007110 ORTHO05D000233 1.4e-47 194.1 174 63.8
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 1.9e-47 193.7 258 49.6
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 1.1e-44 184.5 322 37.0
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 4.8e-43 179.1 303 36.0
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.4e-41 172.9 303 35.6
ClCG11G007640 Citrullus lanatus HOM05D007110 ORTHO05D000592 2.4e-34 150.2 287 39.0
MELO3C034551.2 Cucumis melo HOM05D007110 ORTHO05D000233 4.9e-32 142.5 161 53.4
MELO3C027954.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.4e-31 141.0 76 90.8
MELO3C032631.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.0e-29 133.3 79 82.3
MELO3C029607.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.7e-29 131.7 79 82.3
ClCG05G015020 Citrullus lanatus HOM05D007110 ORTHO05D000592 3.3e-28 129.8 160 44.4
MELO3C033304.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.0e-26 121.7 134 56.7
CsaV3_7G018420 Cucumis sativus L. HOM05D007110 ORTHO05D000233 4.2e-23 112.8 102 65.7
MELO3C029153.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.1e-21 105.9 65 81.5
MELO3C034460.2 Cucumis melo HOM05D000107 ORTHO05D000062 2.6e-17 93.6 85 61.2
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 3.4e-17 93.2 296 27.0
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 7.7e-17 92.0 200 30.5
Sed0019036 Sechium edule HOM05D000539 ORTHO05D000592 1.7e-16 90.9 308 26.3
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 2.9e-16 90.1 297 26.6
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 5.0e-16 89.4 297 26.3
MELO3C034440.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.4e-15 87.8 49 87.8
MELO3C034970.2 Cucumis melo HOM05D007110 ORTHO05D000592 7.2e-15 85.5 48 87.5
MELO3C031493.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.2e-14 84.7 220 32.7
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.8e-13 80.9 352 28.4
MELO3C030592.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.8e-13 80.9 212 27.8
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 3.0e-13 80.1 312 25.3
ECA236G4222 Erigeron canadensis HOM05D000616 ORTHO05D000233 3.9e-13 79.7 162 32.7
MELO3C034911.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.7e-13 79.0 38 94.7
FvH4_4g09212 Fragaria vesca HOM05D000539 ORTHO05D000233 1.5e-12 77.8 254 27.2
Sed0012653 Sechium edule HOM05D007110 ORTHO05D000592 2.0e-12 77.4 177 28.8
MELO3C034611.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.5e-12 77.0 258 29.5
MELO3C028643.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.3e-12 76.6 319 26.3
RcHm_v2.0_Chr6g0271071 Rosa chinensis HOM05D000539 ORTHO05D000592 3.3e-12 76.6 185 28.6
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.8e-11 73.6 254 28.0
RcHm_v2.0_Chr7g0211271 Rosa chinensis HOM05D000539 ORTHO05D000233 2.8e-11 73.6 298 24.8
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.8e-11 72.8 306 26.1
Hma1.2p1_0043F.1_g025950 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.8e-11 72.8 265 26.4
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 8.2e-11 72.0 171 29.8
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 2.4e-10 70.5 175 32.0
Atru.chr6.156 Acer truncatum HOM05D000616 ORTHO05D000233 4.1e-10 69.7 183 30.6
MELO3C029326.2 Cucumis melo HOM05D000539 ORTHO05D000233 6.9e-10 68.9 218 27.5
HanXRQChr15g0473781 Helianthus annuus HOM05D000616 ORTHO05D000233 6.9e-10 68.9 217 28.6
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 6.9e-10 68.9 320 25.0
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 1.2e-09 68.2 217 29.5
HanXRQChr10g0317551 Helianthus annuus HOM05D000616 ORTHO05D000233 1.5e-09 67.8 170 31.2
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.5e-09 67.8 205 24.9
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-09 67.8 205 24.9
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 1.5e-09 67.8 358 22.3
Sed0004787 Sechium edule HOM05D000539 ORTHO05D000233 1.5e-09 67.8 225 26.7
AUR62026574 Chenopodium quinoa HOM05D002644 ORTHO05D000233 2.6e-09 67.0 186 33.3
ClCG03G012240 Citrullus lanatus HOM05D016206 ORTHO05D000233 1.0e-08 65.1 246 26.4
DCAR_001130 Daucus carota HOM05D047378 ORTHO05D010791 1.0e-08 65.1 194 29.4
Hma1.2p1_1437F.1_g283240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.0e-08 65.1 318 24.8
SHI35917 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-08 64.7 242 28.5
Ciclev10002181m.g Citrus clementina HOM05D000539 ORTHO05D000592 1.7e-08 64.3 168 26.2
Sed0016258 Sechium edule HOM05D000539 ORTHO05D000233 2.9e-08 63.5 157 30.6
SHI21802 Sapria himalayana HOM05D000616 ORTHO05D000233 3.8e-08 63.2 206 29.6
SHI37927 Sapria himalayana HOM05D000616 ORTHO05D000233 6.5e-08 62.4 253 27.3
RcHm_v2.0_Chr4g0401821 Rosa chinensis HOM05D000539 ORTHO05D000592 8.5e-08 62.0 180 25.6
SHI23185 Sapria himalayana HOM05D000616 ORTHO05D000233 8.5e-08 62.0 242 27.3
FvH4_3g14361 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-07 61.6 270 24.1
Prupe.7G026800 Prunus persica HOM05D000539 ORTHO05D000592 1.1e-07 61.6 166 30.1
ClCG08G002920 Citrullus lanatus HOM05D016206 ORTHO05D000233 1.4e-07 61.2 161 29.2
MELO3C033325.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.4e-07 61.2 107 33.6
Rhsim01G0018800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.4e-07 61.2 316 23.7
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 3.2e-07 60.1 271 25.8
RcHm_v2.0_Chr2g0160781 Rosa chinensis HOM05D000539 ORTHO05D010294 3.2e-07 60.1 174 27.0
SHI07450 Sapria himalayana HOM05D000616 ORTHO05D000233 3.2e-07 60.1 251 27.5
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.2e-07 59.7 203 29.6
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.2e-07 59.7 203 29.6
SHI23159 Sapria himalayana HOM05D000616 ORTHO05D000233 4.2e-07 59.7 204 30.4
CANSAT56G2878 Cannabis sativa HOM05D000539 ORTHO05D000233 5.5e-07 59.3 323 25.7
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.5e-07 59.3 295 24.7
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-07 59.3 337 22.6
RcHm_v2.0_Chr3g0495531 Rosa chinensis HOM05D000539 ORTHO05D000592 5.5e-07 59.3 183 25.7
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 7.2e-07 58.9 297 23.9
vmacro01527 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 7.2e-07 58.9 317 24.0
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 7.2e-07 58.9 302 24.8
ECA246G2093 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.4e-07 58.5 152 29.6
ECA246G5051 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.4e-07 58.5 192 29.2
SHI40385 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-06 58.2 163 31.3
ClCG01G011930 Citrullus lanatus HOM05D016206 ORTHO05D000233 1.6e-06 57.8 291 24.4
SHI06254 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-06 57.8 157 29.9
SHI27903 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-06 57.8 263 27.0
MELO3C033645.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.1e-06 57.4 215 28.4
SHI28371 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-06 57.4 180 31.1
SHI28226 Sapria himalayana HOM05D000616 ORTHO05D000233 2.7e-06 57.0 176 30.7
SHI39486 Sapria himalayana HOM05D000616 ORTHO05D000233 2.7e-06 57.0 166 30.7
AUR62031308 Chenopodium quinoa HOM05D002644 ORTHO05D003267 3.6e-06 56.6 192 25.0
RcHm_v2.0_Chr3g0494841 Rosa chinensis HOM05D000539 ORTHO05D000592 3.6e-06 56.6 204 25.5
SHI23123 Sapria himalayana HOM05D000616 ORTHO05D000233 3.6e-06 56.6 176 29.5
CsaV3_3G021730 Cucumis sativus L. HOM05D000539 ORTHO05D000592 4.7e-06 56.2 77 40.3
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.7e-06 56.2 166 26.5
SHI21762 Sapria himalayana HOM05D000616 ORTHO05D000233 4.7e-06 56.2 264 24.6
SHI31787 Sapria himalayana HOM05D000616 ORTHO05D000233 4.7e-06 56.2 197 29.9


User provided reference genes

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