Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032730.2 Cucumis melo HOM05D000107 ORTHO05D000062 5.8e-112 407.5 199 100.0
PSO063G0443 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-17 92.8 73 54.8
PSO339G6582 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-17 92.8 73 54.8
PSO384G2882 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-17 92.8 73 54.8
PSO675G6961 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-17 92.8 73 54.8
MELO3C010327.2 Cucumis melo HOM05D000107 ORTHO05D000062 7.3e-14 81.6 155 34.8
Atru.chr6.2082 Acer truncatum HOM05D000107 ORTHO05D000062 1.2e-13 80.9 146 32.2
MELO3C028826.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.2e-13 80.9 128 36.7
Migut.E01700 Erythranthe guttata HOM05D000107 ORTHO05D000062 1.2e-13 80.9 129 37.2
PSO675G0591 Papaver somniferum HOM05D000107 ORTHO05D000062 2.8e-13 79.7 67 49.3
Atru.chr11.112 Acer truncatum HOM05D000107 ORTHO05D000062 1.4e-12 77.4 66 51.5
PSO017G6416 Papaver somniferum HOM05D000107 ORTHO05D000062 1.4e-12 77.4 67 49.3
PSO675G5010 Papaver somniferum HOM05D000107 ORTHO05D000062 1.4e-12 77.4 67 49.3
PSO675G5616 Papaver somniferum HOM05D000107 ORTHO05D000062 1.4e-12 77.4 67 49.3
PSO210G1515 Papaver somniferum HOM05D000107 ORTHO05D000062 2.3e-12 76.6 66 53.0
FvH4_6g34821 Fragaria vesca HOM05D000107 ORTHO05D000062 3.1e-12 76.3 75 46.7
FvH4_6g23073 Fragaria vesca HOM05D000107 ORTHO05D000062 5.2e-12 75.5 127 34.6
RcHm_v2.0_Chr2g0106121 Rosa chinensis HOM05D000107 ORTHO05D000062 5.2e-12 75.5 86 45.3
FvH4_4g15893 Fragaria vesca HOM05D000107 ORTHO05D000062 8.9e-12 74.7 87 44.8
Aqoxy4G00524 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 3.4e-11 72.8 79 45.6
ECA233G0961 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.4e-11 72.8 146 37.0
ECA234G3876 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.4e-11 72.4 126 39.7
PSO384G4887 Papaver somniferum HOM05D000107 ORTHO05D000062 4.4e-11 72.4 96 37.5
CAN.G760.10 Capsicum annuum HOM05D000107 ORTHO05D000062 5.8e-11 72.0 64 53.1
SHI47370 Sapria himalayana HOM05D000107 ORTHO05D000062 5.8e-11 72.0 65 47.7
CANSAT11G1880 Cannabis sativa HOM05D000107 ORTHO05D000062 7.5e-11 71.6 63 50.8
CANSAT64G1084 Cannabis sativa HOM05D000107 ORTHO05D000062 7.5e-11 71.6 80 47.5
PSO541G2440 Papaver somniferum HOM05D000107 ORTHO05D000062 7.5e-11 71.6 79 41.8
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.5e-11 71.6 66 45.5
CANSAT21G1356 Cannabis sativa HOM05D000107 ORTHO05D000062 9.8e-11 71.2 121 34.7
FvH4_5g35083 Fragaria vesca HOM05D008794 ORTHO05D013083 9.8e-11 71.2 93 36.6
CANSAT21G2134 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-10 70.9 63 50.8
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-10 70.9 66 43.9
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-10 70.9 66 43.9
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-10 70.5 72 47.2
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-10 70.5 72 47.2
FvH4_5g06092 Fragaria vesca HOM05D000107 ORTHO05D000062 2.2e-10 70.1 85 41.2
PSO782G5139 Papaver somniferum HOM05D000107 ORTHO05D000062 2.2e-10 70.1 75 42.7
Atru.chr6.422 Acer truncatum HOM05D000107 ORTHO05D000062 2.9e-10 69.7 128 32.0
ECA238G3175 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.9e-10 69.7 64 56.2
FvH4_7g15281 Fragaria vesca HOM05D007789 ORTHO05D008963 2.9e-10 69.7 134 32.1
CANSAT01G1130 Cannabis sativa HOM05D000107 ORTHO05D000062 3.7e-10 69.3 63 49.2
CANSAT25G3231 Cannabis sativa HOM05D000107 ORTHO05D000062 3.7e-10 69.3 120 37.5
FvH4_3g31280 Fragaria vesca HOM05D007789 ORTHO05D008963 3.7e-10 69.3 77 40.3
PSO832G1634 Papaver somniferum HOM05D000107 ORTHO05D000062 3.7e-10 69.3 64 46.9
Atru.chr4.921 Acer truncatum HOM05D000107 ORTHO05D000062 4.9e-10 68.9 67 43.3
FvH4_6g17652 Fragaria vesca HOM05D000107 ORTHO05D008963 4.9e-10 68.9 73 41.1
RcHm_v2.0_Chr4g0403821 Rosa chinensis HOM05D000107 ORTHO05D000062 4.9e-10 68.9 121 33.9
ECA246G0108 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.4e-10 68.6 65 52.3
CANSAT35G0031 Cannabis sativa HOM05D000107 ORTHO05D000062 8.3e-10 68.2 79 40.5
FvH4_2g02785 Fragaria vesca HOM05D000107 ORTHO05D000062 8.3e-10 68.2 76 43.4
FvH4_6g21813 Fragaria vesca HOM05D000107 ORTHO05D000062 8.3e-10 68.2 76 44.7
FvH4_6g20142 Fragaria vesca HOM05D000107 ORTHO05D002484 1.1e-09 67.8 76 43.4
PSO210G5494 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-09 67.8 114 33.3
FvH4_3g16302 Fragaria vesca HOM05D000107 ORTHO05D002484 1.4e-09 67.4 76 43.4
FvH4_7g17991 Fragaria vesca HOM05D000107 ORTHO05D000062 1.4e-09 67.4 76 43.4
Rhsim06G0126900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-09 67.4 72 43.1
Rhsim10G0126500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-09 67.4 72 43.1
CANSAT11G0404 Cannabis sativa HOM05D000107 ORTHO05D000062 2.4e-09 66.6 63 47.6
CANSAT64G0850 Cannabis sativa HOM05D000107 ORTHO05D000062 2.4e-09 66.6 63 47.6
ECA246G4041 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.4e-09 66.6 174 32.2
FvH4_3g30391 Fragaria vesca HOM05D008640 ORTHO05D000062 2.4e-09 66.6 76 43.4
FvH4_3g33093 Fragaria vesca HOM05D000107 ORTHO05D002484 2.4e-09 66.6 76 43.4
FvH4_4g10471 Fragaria vesca HOM05D000107 ORTHO05D000062 2.4e-09 66.6 76 43.4
FvH4_4g12773 Fragaria vesca HOM05D000107 ORTHO05D002484 2.4e-09 66.6 76 43.4
FvH4_4g14443 Fragaria vesca HOM05D000107 ORTHO05D002484 2.4e-09 66.6 76 43.4
FvH4_5g30952 Fragaria vesca HOM05D000107 ORTHO05D000062 2.4e-09 66.6 76 43.4
PSO173G0164 Papaver somniferum HOM05D000107 ORTHO05D000062 2.4e-09 66.6 66 42.4
SHI29809 Sapria himalayana HOM05D000107 ORTHO05D000062 2.4e-09 66.6 83 34.9
CANSAT56G4443 Cannabis sativa HOM05D000107 ORTHO05D000062 3.2e-09 66.2 63 46.0
FvH4_2g02272 Fragaria vesca HOM05D000107 ORTHO05D002484 3.2e-09 66.2 78 41.0
FvH4_3g32261 Fragaria vesca HOM05D000107 ORTHO05D002484 3.2e-09 66.2 76 43.4
FvH4_4g14562 Fragaria vesca HOM05D000107 ORTHO05D002484 3.2e-09 66.2 76 43.4
PSO675G7714 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-09 66.2 79 38.0
Rhsim08G0138300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-09 66.2 86 38.4
FvH4_4g19121 Fragaria vesca HOM05D000107 ORTHO05D000062 4.1e-09 65.9 76 42.1
FvH4_6g39685 Fragaria vesca HOM05D000107 ORTHO05D002484 4.1e-09 65.9 76 42.1
QL12p013571 Quercus lobata HOM05D000107 ORTHO05D000062 4.1e-09 65.9 89 38.2
FvH4_3g14320 Fragaria vesca HOM05D000107 ORTHO05D002484 5.4e-09 65.5 73 43.8
FvH4_6g30772 Fragaria vesca HOM05D000107 ORTHO05D002484 5.4e-09 65.5 76 42.1
MBI14_g47774_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D011056 5.4e-09 65.5 126 32.5
Atru.chr2.704 Acer truncatum HOM05D000107 ORTHO05D000062 7.0e-09 65.1 83 42.2
ECA232G3963 Erigeron canadensis HOM05D000107 ORTHO05D000062 7.0e-09 65.1 128 34.4
Os02g0583300 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 7.0e-09 65.1 65 47.7
Os04g0519200 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 7.0e-09 65.1 65 47.7
Os06g0240700 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 7.0e-09 65.1 65 47.7
FvH4_1g28422 Fragaria vesca HOM05D000107 ORTHO05D002484 9.2e-09 64.7 76 42.1
Hma1.2p1_1173F.1_g263710 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 9.2e-09 64.7 75 42.7
FvH4_4g04242 Fragaria vesca HOM05D000107 ORTHO05D002484 1.2e-08 64.3 76 42.1
FvH4_7g13281 Fragaria vesca HOM05D000107 ORTHO05D002484 1.2e-08 64.3 76 42.1
Rhsim11G0005900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-08 64.3 72 41.7
FvH4_2g00032 Fragaria vesca HOM05D000107 ORTHO05D002484 1.6e-08 63.9 73 43.8
FvH4_6g33481 Fragaria vesca HOM05D000107 ORTHO05D002484 1.6e-08 63.9 76 40.8
FvH4_7g06092 Fragaria vesca HOM05D000107 ORTHO05D000062 1.6e-08 63.9 76 42.1
TWI31G1349 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.6e-08 63.9 65 43.1
CSS0003322 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-08 63.5 66 43.9
CSS0012803 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-08 63.5 66 43.9
CSS0014387 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-08 63.5 66 43.9
CSS0024740 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-08 63.5 66 43.9
CSS0032482 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-08 63.5 66 43.9
CSS0047068 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-08 63.5 66 43.9
CSS0048301 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-08 63.5 66 43.9
FvH4_3g30614 Fragaria vesca HOM05D000107 ORTHO05D002484 2.0e-08 63.5 76 42.1
PSO541G0392 Papaver somniferum HOM05D000107 ORTHO05D000062 2.0e-08 63.5 108 32.4
MBI08_g33343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-08 63.2 119 31.1
Rhsim05G0124400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-08 63.2 67 43.3
Rhsim11G0024300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-08 63.2 67 43.3
FvH4_5g35211 Fragaria vesca HOM05D000107 ORTHO05D002484 3.5e-08 62.8 76 39.5
CSS0027655 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.6e-08 62.4 80 40.0
PSO210G5904 Papaver somniferum HOM05D000107 ORTHO05D000062 6.0e-08 62.0 94 34.0
Rhsim02G0157900 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.0e-08 62.0 66 37.9
Rhsim03G0202400 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.0e-08 62.0 66 37.9
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.0e-08 62.0 79 39.2
FvH4_4g13891 Fragaria vesca HOM05D000107 ORTHO05D000062 7.8e-08 61.6 76 40.8
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-08 61.6 80 41.2
Rhsim11G0023200 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-08 61.6 67 41.8
FvH4_6g06671 Fragaria vesca HOM05D000107 ORTHO05D002484 1.0e-07 61.2 73 41.1
FvH4_7g07901 Fragaria vesca HOM05D000107 ORTHO05D000062 1.0e-07 61.2 76 40.8
SHI42631 Sapria himalayana HOM05D000107 ORTHO05D000062 1.0e-07 61.2 105 36.2
CiPaw.11G164700 Carya illinoinensis HOM05D000107 ORTHO05D000062 1.3e-07 60.8 95 32.6
FvH4_7g00291 Fragaria vesca HOM05D000107 ORTHO05D002484 1.3e-07 60.8 76 39.5
PSO832G0659 Papaver somniferum HOM05D000107 ORTHO05D000062 2.3e-07 60.1 75 37.3
SHI45316 Sapria himalayana HOM05D000107 ORTHO05D000062 2.3e-07 60.1 105 36.2
CSS0045611 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.0e-07 59.7 65 38.5
CANSAT01G1656 Cannabis sativa HOM05D000107 ORTHO05D000062 3.0e-07 59.7 79 40.5
CANSAT80G2014 Cannabis sativa HOM05D000107 ORTHO05D000062 3.0e-07 59.7 79 40.5
CSS0013241 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.9e-07 59.3 94 35.1
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 3.9e-07 59.3 66 40.9
Rhsim10G0213900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.9e-07 59.3 66 42.4
CSS0020545 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.0e-07 58.9 80 38.8
ECA043G0002 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.0e-07 58.9 111 36.0
ECA232G2177 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.0e-07 58.9 111 36.0
ECA234G2615 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.0e-07 58.9 71 39.4
Peaxi162Scf00479g00422 Petunia axillaris HOM05D000107 ORTHO05D000062 5.0e-07 58.9 80 42.5
Peaxi162Scf00479g00441 Petunia axillaris HOM05D000107 ORTHO05D000062 5.0e-07 58.9 80 42.5
Aqoxy6G01994 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 6.6e-07 58.5 66 42.4
FvH4_2g19023 Fragaria vesca HOM05D000107 ORTHO05D002484 6.6e-07 58.5 76 40.8
SGA_v2.0_scaffold6G03311 Striga asiatica HOM05D000107 ORTHO05D000062 6.6e-07 58.5 64 43.8
CSS0007472 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 94 34.0
CSS0007710 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 94 34.0
CSS0009480 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 94 34.0
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 94 34.0
CSS0024232 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 66 39.4
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 94 34.0
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 94 34.0
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 94 34.0
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.8 94 34.0
FvH4_4g13832 Fragaria vesca HOM05D000107 ORTHO05D002484 1.1e-06 57.8 73 39.7
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 1.1e-06 57.8 66 40.9
Aqoxy2G02171 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 42.4
CSS0012968 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 39.4
CSS0015331 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 39.4
CSS0024895 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 39.4
CSS0028200 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 39.4
CSS0034304 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 39.4
CSS0038868 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 39.4
CSS0042079 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 39.4
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 43.9
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-06 57.0 97 32.0
CSS0003957 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.5e-06 56.6 77 41.6
CSS0007220 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.5e-06 56.6 77 41.6
CSS0048865 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.5e-06 56.6 77 41.6
CSS0049745 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.5e-06 56.6 77 41.6
Rhsim03G0061000 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-06 56.6 66 39.4
Hma1.2p1_0371F.1_g138090 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 3.3e-06 56.2 63 42.9
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 56.2 104 33.7
CSS0007461 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.3e-06 55.8 94 33.0
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-06 55.8 66 40.9
Rhsim09G0060300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-06 55.8 66 40.9
Rhsim09G0073600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-06 55.8 65 40.0
Aqoxy4G02090 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 5.6e-06 55.5 79 38.0
CSS0009121 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-06 55.5 77 40.3
CSS0022398 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-06 55.5 77 40.3
Rhsim01G0051300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.6e-06 55.5 81 37.0
EL10Ac5g11722 Beta vulgaris HOM05D000107 ORTHO05D000062 7.3e-06 55.1 97 33.0
CSS0013519 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.3e-06 55.1 77 40.3
CSS0050072 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.3e-06 55.1 66 40.9
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.3e-06 55.1 66 40.9


User provided reference genes

Program Settings