Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.8e-244 846.7 417 100.0
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.4e-51 206.1 216 57.4
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-45 188.3 185 58.9
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.3e-41 174.9 200 52.5
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-39 167.9 120 73.3
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-38 165.2 115 73.9
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.0e-34 151.0 88 79.5
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.8e-29 132.9 94 61.7
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 9.8e-29 132.1 90 67.8
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.9e-28 130.6 124 55.6
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.9e-28 129.8 127 51.2
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.3e-28 129.0 92 63.0
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.4e-27 128.3 91 64.8
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-27 128.3 94 60.6
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-23 115.2 87 59.8
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-23 114.8 96 52.1
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-23 114.0 88 58.0
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.6e-23 113.6 165 41.8
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 4.7e-23 113.2 90 56.7
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.2e-23 112.8 87 58.6
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-22 112.1 105 48.6
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-22 112.1 105 48.6
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-19 102.1 94 53.2
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.1e-19 102.1 153 37.9
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 4.1e-19 100.1 90 47.8
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.2e-18 98.6 85 51.8
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-18 98.2 139 40.3
MELO3C031186.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-18 98.2 143 51.7
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.6e-18 98.2 77 54.5
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 1.6e-18 98.2 107 43.9
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 2.7e-18 97.4 87 50.6
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 2.7e-18 97.4 77 53.2
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 3.5e-18 97.1 115 50.4
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 4.6e-18 96.7 85 52.9
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-17 95.5 112 44.6
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.0e-17 94.0 65 60.0
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 2.5e-16 90.9 91 49.5
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 2.1e-15 87.8 91 44.0
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.4e-14 85.1 75 56.0
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-14 85.1 68 51.5
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-14 84.7 184 33.7
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 3.1e-14 84.0 62 58.1
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 6.8e-14 82.8 75 53.3
MELO3C032661.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.9e-14 82.4 43 79.1
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.5e-13 81.6 75 52.0
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 9.9e-13 79.0 87 41.4
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 1.3e-12 78.6 72 41.7
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.8e-12 77.0 75 50.7
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.1e-11 75.5 75 49.3
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.1e-11 73.6 58 55.2
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.1e-11 72.8 59 57.6
RcHm_v2.0_Chr7g0177401 Rosa chinensis HOM05D007314 ORTHO05D003768 9.2e-11 72.4 67 47.8
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.8e-10 69.3 48 64.6
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 5.1e-09 66.6 89 39.3
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.6e-09 66.2 55 54.5
MELO3C032011.2 Cucumis melo HOM05D011747 ORTHO05D014199 8.7e-09 65.9 144 38.2
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 8.7e-09 65.9 122 29.5
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 4.3e-08 63.5 87 34.5
BolC3t20566H Brassica oleracea HOM05D007314 ORTHO05D003768 4.3e-08 63.5 69 37.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 7.3e-08 62.8 78 38.5
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 9.6e-08 62.4 96 34.4
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.6e-08 62.4 80 38.8
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 1.2e-07 62.0 81 38.3
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 1.2e-07 62.0 88 36.4
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 1.2e-07 62.0 74 41.9
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-07 61.6 49 49.0
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 2.1e-07 61.2 122 27.9
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.1e-07 61.2 89 36.0
MELO3C000505.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-07 60.8 40 60.0
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 2.8e-07 60.8 88 35.2
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 2.8e-07 60.8 78 37.2
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 4.7e-07 60.1 75 42.7
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 6.2e-07 59.7 81 42.0
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.1e-07 59.3 79 38.0
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-06 58.5 49 53.1
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-06 58.5 131 28.2
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.4e-06 58.5 77 40.3
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.1e-06 57.4 37 62.2
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.1e-06 57.4 80 36.2
MELO3C032453.2 Cucumis melo HOM05D007314 ORTHO05D034924 6.9e-06 56.2 44 54.5
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 9.0e-06 55.8 76 35.5


User provided reference genes

Program Settings